EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0017741 (Gene tree)
Gene ID: -
Gene Symbol: Mrm1
Alias: A530065E19Rik
Full Name: mitochondrial rRNA methyltransferase 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 10143 bases
Position: chr11:85251614-85261756
Accession: 2443470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0030303	SpoU_sub_bind	PF08032.12	6e-15	1	1
MGP_SPRETEiJ_P0030303	SpoU_methylase	PF00588.19	2.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0030305	-	173	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0030304	-	547	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0030303	-	2489	-	MGP_SPRETEiJ_P0030303	320 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0017741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0017741's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0017741	Mrm1	97	81.994	ENSG00000278619	MRM1	88	81.994	Homo_sapiens
MGP_SPRETEiJ_G0017741	Mrm1	90	45.928	ENSAPOG00000016309	mrm1	76	45.928	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0017741	Mrm1	97	82.278	ENSAMEG00000008301	MRM1	88	82.278	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0017741	Mrm1	84	49.135	ENSACIG00000012244	mrm1	72	49.135	Amphilophus_citrinellus
MGP_SPRETEiJ_G0017741	Mrm1	91	47.423	ENSAOCG00000000362	mrm1	69	48.214	Amphiprion_ocellaris
MGP_SPRETEiJ_G0017741	Mrm1	91	47.079	ENSAPEG00000004511	mrm1	69	47.857	Amphiprion_percula
MGP_SPRETEiJ_G0017741	Mrm1	87	53.684	ENSAPLG00000006433	MRM1	90	53.684	Anas_platyrhynchos
MGP_SPRETEiJ_G0017741	Mrm1	93	50.814	ENSACAG00000002573	MRM1	92	50.814	Anolis_carolinensis
MGP_SPRETEiJ_G0017741	Mrm1	97	82.051	ENSANAG00000025500	MRM1	89	82.051	Aotus_nancymaae
MGP_SPRETEiJ_G0017741	Mrm1	80	51.163	ENSACLG00000023745	mrm1	87	51.311	Astatotilapia_calliptera
MGP_SPRETEiJ_G0017741	Mrm1	88	42.662	ENSAMXG00000007295	mrm1	71	42.662	Astyanax_mexicanus
MGP_SPRETEiJ_G0017741	Mrm1	88	42.662	ENSAMXG00000030596	mrm1	71	42.662	Astyanax_mexicanus
MGP_SPRETEiJ_G0017741	Mrm1	97	78.165	ENSBTAG00000010311	MRM1	88	78.165	Bos_taurus
MGP_SPRETEiJ_G0017741	Mrm1	97	81.672	ENSCJAG00000001023	MRM1	89	81.672	Callithrix_jacchus
MGP_SPRETEiJ_G0017741	Mrm1	97	78.481	ENSCAFG00000017849	MRM1	89	78.481	Canis_familiaris
MGP_SPRETEiJ_G0017741	Mrm1	97	78.481	ENSCAFG00020002377	MRM1	89	78.481	Canis_lupus_dingo
MGP_SPRETEiJ_G0017741	Mrm1	97	78.797	ENSCHIG00000008558	MRM1	88	78.797	Capra_hircus
MGP_SPRETEiJ_G0017741	Mrm1	97	84.615	ENSTSYG00000036380	MRM1	88	84.615	Carlito_syrichta
MGP_SPRETEiJ_G0017741	Mrm1	97	82.051	ENSCPOG00000004283	MRM1	88	82.051	Cavia_porcellus
MGP_SPRETEiJ_G0017741	Mrm1	97	81.994	ENSCCAG00000020032	MRM1	89	81.994	Cebus_capucinus
MGP_SPRETEiJ_G0017741	Mrm1	97	84.244	ENSCATG00000041516	MRM1	88	84.244	Cercocebus_atys
MGP_SPRETEiJ_G0017741	Mrm1	99	80.308	ENSCLAG00000010960	MRM1	91	80.308	Chinchilla_lanigera
MGP_SPRETEiJ_G0017741	Mrm1	97	84.566	ENSCSAG00000006055	MRM1	88	84.566	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0017741	Mrm1	83	48.921	ENSCPBG00000009581	MRM1	59	48.921	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0017741	Mrm1	97	84.244	ENSCANG00000025543	MRM1	88	84.244	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0017741	Mrm1	100	90.062	ENSCGRG00001001937	Mrm1	100	90.062	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0017741	Mrm1	100	90.062	ENSCGRG00000009593	Mrm1	100	90.062	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0017741	Mrm1	89	44.262	ENSCSEG00000014575	mrm1	80	44.262	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0017741	Mrm1	84	46.996	ENSCVAG00000012104	mrm1	72	46.996	Cyprinodon_variegatus
MGP_SPRETEiJ_G0017741	Mrm1	63	53.000	ENSDARG00000059658	mrm1	99	53.000	Danio_rerio
MGP_SPRETEiJ_G0017741	Mrm1	99	67.069	ENSDNOG00000035159	MRM1	92	67.069	Dasypus_novemcinctus
MGP_SPRETEiJ_G0017741	Mrm1	72	81.545	ENSDORG00000013267	Mrm1	99	81.545	Dipodomys_ordii
MGP_SPRETEiJ_G0017741	Mrm1	77	76.285	ENSETEG00000000378	MRM1	95	76.285	Echinops_telfairi
MGP_SPRETEiJ_G0017741	Mrm1	99	79.938	ENSEASG00005002123	MRM1	91	79.938	Equus_asinus_asinus
MGP_SPRETEiJ_G0017741	Mrm1	99	79.938	ENSECAG00000025139	MRM1	91	79.938	Equus_caballus
MGP_SPRETEiJ_G0017741	Mrm1	63	77.404	ENSEEUG00000013434	-	93	77.404	Erinaceus_europaeus
MGP_SPRETEiJ_G0017741	Mrm1	85	46.763	ENSELUG00000012392	mrm1	62	46.763	Esox_lucius
MGP_SPRETEiJ_G0017741	Mrm1	99	78.528	ENSFCAG00000031667	MRM1	91	78.528	Felis_catus
MGP_SPRETEiJ_G0017741	Mrm1	50	62.733	ENSFALG00000005294	MRM1	98	62.733	Ficedula_albicollis
MGP_SPRETEiJ_G0017741	Mrm1	97	73.077	ENSFDAG00000018545	MRM1	96	73.077	Fukomys_damarensis
MGP_SPRETEiJ_G0017741	Mrm1	83	45.788	ENSFHEG00000005529	mrm1	75	46.403	Fundulus_heteroclitus
MGP_SPRETEiJ_G0017741	Mrm1	78	56.349	ENSGALG00000039523	MRM1	88	59.292	Gallus_gallus
MGP_SPRETEiJ_G0017741	Mrm1	88	46.758	ENSGAFG00000012959	mrm1	79	46.758	Gambusia_affinis
MGP_SPRETEiJ_G0017741	Mrm1	81	49.612	ENSGACG00000004024	mrm1	96	49.612	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0017741	Mrm1	87	52.234	ENSGAGG00000000908	MRM1	71	52.234	Gopherus_agassizii
MGP_SPRETEiJ_G0017741	Mrm1	97	81.994	ENSGGOG00000007979	MRM1	88	81.994	Gorilla_gorilla
MGP_SPRETEiJ_G0017741	Mrm1	80	50.775	ENSHBUG00000004484	mrm1	87	50.936	Haplochromis_burtoni
MGP_SPRETEiJ_G0017741	Mrm1	99	80.308	ENSHGLG00000008701	MRM1	92	80.745	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0017741	Mrm1	99	70.769	ENSHGLG00100012646	MRM1	99	71.692	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0017741	Mrm1	86	48.454	ENSHCOG00000003665	mrm1	81	47.973	Hippocampus_comes
MGP_SPRETEiJ_G0017741	Mrm1	83	45.221	ENSIPUG00000022357	mrm1	76	41.914	Ictalurus_punctatus
MGP_SPRETEiJ_G0017741	Mrm1	97	82.372	ENSSTOG00000002422	MRM1	93	82.372	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0017741	Mrm1	91	78.767	ENSJJAG00000010068	Mrm1	99	77.891	Jaculus_jaculus
MGP_SPRETEiJ_G0017741	Mrm1	81	50.376	ENSLBEG00000009581	mrm1	86	50.376	Labrus_bergylta
MGP_SPRETEiJ_G0017741	Mrm1	88	43.554	ENSLACG00000017664	MRM1	96	43.554	Latimeria_chalumnae
MGP_SPRETEiJ_G0017741	Mrm1	83	51.685	ENSLOCG00000004945	mrm1	84	51.685	Lepisosteus_oculatus
MGP_SPRETEiJ_G0017741	Mrm1	92	81.879	ENSLAFG00000012584	MRM1	91	81.879	Loxodonta_africana
MGP_SPRETEiJ_G0017741	Mrm1	97	84.887	ENSMFAG00000032112	MRM1	89	84.887	Macaca_fascicularis
MGP_SPRETEiJ_G0017741	Mrm1	97	84.244	ENSMMUG00000000622	MRM1	91	84.244	Macaca_mulatta
MGP_SPRETEiJ_G0017741	Mrm1	97	84.566	ENSMNEG00000044557	MRM1	89	84.566	Macaca_nemestrina
MGP_SPRETEiJ_G0017741	Mrm1	97	84.887	ENSMLEG00000031933	MRM1	88	84.887	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0017741	Mrm1	85	45.051	ENSMAMG00000007018	mrm1	99	44.884	Mastacembelus_armatus
MGP_SPRETEiJ_G0017741	Mrm1	80	51.163	ENSMZEG00005008320	mrm1	87	51.311	Maylandia_zebra
MGP_SPRETEiJ_G0017741	Mrm1	100	88.474	ENSMAUG00000020976	Mrm1	100	88.474	Mesocricetus_auratus
MGP_SPRETEiJ_G0017741	Mrm1	95	82.178	ENSMICG00000004216	MRM1	91	82.178	Microcebus_murinus
MGP_SPRETEiJ_G0017741	Mrm1	89	47.284	ENSMMOG00000001468	mrm1	91	46.965	Mola_mola
MGP_SPRETEiJ_G0017741	Mrm1	91	68.836	ENSMODG00000003307	MRM1	68	68.836	Monodelphis_domestica
MGP_SPRETEiJ_G0017741	Mrm1	86	49.281	ENSMALG00000014364	mrm1	88	48.772	Monopterus_albus
MGP_SPRETEiJ_G0017741	Mrm1	100	99.062	MGP_CAROLIEiJ_G0016896	Mrm1	100	99.062	Mus_caroli
MGP_SPRETEiJ_G0017741	Mrm1	100	99.375	ENSMUSG00000018405	Mrm1	100	99.375	Mus_musculus
MGP_SPRETEiJ_G0017741	Mrm1	100	96.875	MGP_PahariEiJ_G0018026	Mrm1	100	96.875	Mus_pahari
MGP_SPRETEiJ_G0017741	Mrm1	99	78.116	ENSMPUG00000015063	MRM1	91	78.116	Mustela_putorius_furo
MGP_SPRETEiJ_G0017741	Mrm1	97	80.892	ENSMLUG00000013208	MRM1	88	80.892	Myotis_lucifugus
MGP_SPRETEiJ_G0017741	Mrm1	97	85.897	ENSNGAG00000019175	Mrm1	95	85.897	Nannospalax_galili
MGP_SPRETEiJ_G0017741	Mrm1	83	48.592	ENSNBRG00000023533	mrm1	87	50.936	Neolamprologus_brichardi
MGP_SPRETEiJ_G0017741	Mrm1	97	83.280	ENSNLEG00000002300	MRM1	88	83.280	Nomascus_leucogenys
MGP_SPRETEiJ_G0017741	Mrm1	95	77.705	ENSOPRG00000012866	MRM1	89	77.273	Ochotona_princeps
MGP_SPRETEiJ_G0017741	Mrm1	96	52.885	ENSODEG00000013042	-	92	52.885	Octodon_degus
MGP_SPRETEiJ_G0017741	Mrm1	83	49.296	ENSONIG00000021236	mrm1	98	49.488	Oreochromis_niloticus
MGP_SPRETEiJ_G0017741	Mrm1	98	76.038	ENSOCUG00000012149	MRM1	88	76.038	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0017741	Mrm1	79	51.969	ENSORLG00000025876	mrm1	82	51.969	Oryzias_latipes
MGP_SPRETEiJ_G0017741	Mrm1	79	52.157	ENSORLG00020021701	mrm1	81	52.157	Oryzias_latipes_hni
MGP_SPRETEiJ_G0017741	Mrm1	79	52.941	ENSORLG00015020702	mrm1	81	52.941	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0017741	Mrm1	86	47.766	ENSOMEG00000003504	mrm1	93	47.766	Oryzias_melastigma
MGP_SPRETEiJ_G0017741	Mrm1	95	83.828	ENSOGAG00000013785	MRM1	96	83.828	Otolemur_garnettii
MGP_SPRETEiJ_G0017741	Mrm1	97	79.114	ENSOARG00000018616	MRM1	88	79.114	Ovis_aries
MGP_SPRETEiJ_G0017741	Mrm1	97	81.672	ENSPPAG00000043135	MRM1	88	81.672	Pan_paniscus
MGP_SPRETEiJ_G0017741	Mrm1	99	78.221	ENSPPRG00000023620	MRM1	91	78.221	Panthera_pardus
MGP_SPRETEiJ_G0017741	Mrm1	84	81.041	ENSPTIG00000009829	MRM1	94	81.041	Panthera_tigris_altaica
MGP_SPRETEiJ_G0017741	Mrm1	97	82.315	ENSPTRG00000009049	MRM1	88	82.315	Pan_troglodytes
MGP_SPRETEiJ_G0017741	Mrm1	97	83.923	ENSPANG00000022126	MRM1	88	83.923	Papio_anubis
MGP_SPRETEiJ_G0017741	Mrm1	86	49.310	ENSPKIG00000007654	mrm1	77	49.310	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0017741	Mrm1	81	55.725	ENSPSIG00000017622	MRM1	91	55.725	Pelodiscus_sinensis
MGP_SPRETEiJ_G0017741	Mrm1	90	44.695	ENSPMGG00000003905	mrm1	91	44.695	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0017741	Mrm1	65	40.991	ENSPMAG00000000484	mrm1	81	43.094	Petromyzon_marinus
MGP_SPRETEiJ_G0017741	Mrm1	88	67.845	ENSPCIG00000003352	MRM1	74	67.845	Phascolarctos_cinereus
MGP_SPRETEiJ_G0017741	Mrm1	88	43.299	ENSPFOG00000018234	mrm1	71	43.299	Poecilia_formosa
MGP_SPRETEiJ_G0017741	Mrm1	88	48.288	ENSPLAG00000020759	mrm1	73	48.288	Poecilia_latipinna
MGP_SPRETEiJ_G0017741	Mrm1	88	48.797	ENSPMEG00000021744	mrm1	73	48.797	Poecilia_mexicana
MGP_SPRETEiJ_G0017741	Mrm1	91	48.173	ENSPREG00000013224	mrm1	81	48.333	Poecilia_reticulata
MGP_SPRETEiJ_G0017741	Mrm1	92	71.906	ENSPCAG00000011756	MRM1	85	71.906	Procavia_capensis
MGP_SPRETEiJ_G0017741	Mrm1	93	84.564	ENSPCOG00000020871	MRM1	89	84.564	Propithecus_coquereli
MGP_SPRETEiJ_G0017741	Mrm1	98	67.508	ENSPVAG00000011626	MRM1	88	67.508	Pteropus_vampyrus
MGP_SPRETEiJ_G0017741	Mrm1	83	49.296	ENSPNYG00000000528	mrm1	96	49.488	Pundamilia_nyererei
MGP_SPRETEiJ_G0017741	Mrm1	87	45.364	ENSPNAG00000014551	mrm1	73	44.816	Pygocentrus_nattereri
MGP_SPRETEiJ_G0017741	Mrm1	100	93.438	ENSRNOG00000027901	Mrm1	100	93.438	Rattus_norvegicus
MGP_SPRETEiJ_G0017741	Mrm1	97	83.923	ENSRBIG00000040494	MRM1	88	83.923	Rhinopithecus_bieti
MGP_SPRETEiJ_G0017741	Mrm1	97	83.923	ENSRROG00000041704	MRM1	89	83.923	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0017741	Mrm1	97	83.280	ENSSBOG00000024145	MRM1	89	83.280	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0017741	Mrm1	91	45.513	ENSSFOG00015022117	mrm1	77	45.513	Scleropages_formosus
MGP_SPRETEiJ_G0017741	Mrm1	82	50.000	ENSSMAG00000009657	mrm1	85	50.000	Scophthalmus_maximus
MGP_SPRETEiJ_G0017741	Mrm1	88	50.000	ENSSDUG00000009089	mrm1	69	50.000	Seriola_dumerili
MGP_SPRETEiJ_G0017741	Mrm1	88	50.704	ENSSLDG00000024141	mrm1	78	50.704	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0017741	Mrm1	53	75.000	ENSSARG00000009937	-	51	75.000	Sorex_araneus
MGP_SPRETEiJ_G0017741	Mrm1	87	48.311	ENSSPUG00000000265	MRM1	75	48.311	Sphenodon_punctatus
MGP_SPRETEiJ_G0017741	Mrm1	90	82.192	ENSSSCG00000017691	MRM1	80	82.192	Sus_scrofa
MGP_SPRETEiJ_G0017741	Mrm1	60	60.406	ENSTGUG00000008048	MRM1	98	60.406	Taeniopygia_guttata
MGP_SPRETEiJ_G0017741	Mrm1	87	43.000	ENSTRUG00000011737	mrm1	78	43.000	Takifugu_rubripes
MGP_SPRETEiJ_G0017741	Mrm1	81	47.170	ENSTNIG00000010088	mrm1	70	47.170	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0017741	Mrm1	63	80.676	ENSTBEG00000007237	-	95	80.676	Tupaia_belangeri
MGP_SPRETEiJ_G0017741	Mrm1	97	76.972	ENSTTRG00000011984	MRM1	88	76.972	Tursiops_truncatus
MGP_SPRETEiJ_G0017741	Mrm1	97	80.247	ENSUAMG00000023152	MRM1	93	83.162	Ursus_americanus
MGP_SPRETEiJ_G0017741	Mrm1	97	81.013	ENSVVUG00000018420	MRM1	76	81.013	Vulpes_vulpes
MGP_SPRETEiJ_G0017741	Mrm1	85	48.239	ENSXCOG00000003622	mrm1	78	48.239	Xiphophorus_couchianus
MGP_SPRETEiJ_G0017741	Mrm1	88	47.603	ENSXMAG00000014890	mrm1	79	47.603	Xiphophorus_maculatus