EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0017790 (Gene tree)
Gene ID
-
Gene Symbol
Srsf1
Alias
1110054N12Rik|5730507C05Rik|6330415C05Rik|Sfrs1
Full Name
serine/arginine-rich splicing factor 1
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Plus strand
Length
6373 bases
Position
chr11:88659254-88665626
Accession
98283
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0030524RRM_1PF00076.226.3e-3412
MGP_SPRETEiJ_P0030524RRM_1PF00076.226.3e-3422
MGP_SPRETEiJ_P0030523RRM_1PF00076.222.5e-3312
MGP_SPRETEiJ_P0030523RRM_1PF00076.222.5e-3322
MGP_SPRETEiJ_P0030526RRM_1PF00076.222.6e-3312
MGP_SPRETEiJ_P0030526RRM_1PF00076.222.6e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0030529-758--- (aa)--
MGP_SPRETEiJ_T0030528-401-MGP_SPRETEiJ_P003052857 (aa)--
MGP_SPRETEiJ_T0030525-648--- (aa)--
MGP_SPRETEiJ_T0030524-2947-MGP_SPRETEiJ_P0030524201 (aa)-UPI00000EB65E
MGP_SPRETEiJ_T0030527-894-MGP_SPRETEiJ_P0030527105 (aa)-UPI0000470450
MGP_SPRETEiJ_T0030526-1206-MGP_SPRETEiJ_P0030526253 (aa)-UPI00002010B7
MGP_SPRETEiJ_T0030523-5352-MGP_SPRETEiJ_P0030523248 (aa)-UPI0000001220
Gene Model
Click here to download MGP_SPRETEiJ_G0017790's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0017790's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0017790Srsf18242.857MGP_SPRETEiJ_G0025528Srsf65840.670
MGP_SPRETEiJ_G0017790Srsf17979.762MGP_SPRETEiJ_G0028620Srsf97870.330
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSG00000136450SRSF1100100.000Homo_sapiens
MGP_SPRETEiJ_G0017790Srsf19290.217ENSAPOG00000008542-10086.220Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0017790Srsf19091.160ENSAPOG00000002748-9884.362Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0017790Srsf110097.177ENSAMEG00000002635SRSF110097.177Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0017790Srsf19090.055ENSACIG00000008091srsf1a9878.926Amphilophus_citrinellus
MGP_SPRETEiJ_G0017790Srsf19289.474ENSAOCG00000000337-10086.508Amphiprion_ocellaris
MGP_SPRETEiJ_G0017790Srsf19091.713ENSAOCG00000010671-9885.185Amphiprion_ocellaris
MGP_SPRETEiJ_G0017790Srsf19091.713ENSAPEG00000009915-9885.185Amphiprion_percula
MGP_SPRETEiJ_G0017790Srsf19289.474ENSAPEG00000023352-9986.561Amphiprion_percula
MGP_SPRETEiJ_G0017790Srsf19288.587ENSATEG00000021567-10084.959Anabas_testudineus
MGP_SPRETEiJ_G0017790Srsf19091.713ENSATEG00000022403-9884.898Anabas_testudineus
MGP_SPRETEiJ_G0017790Srsf110098.387ENSACAG00000005542-10098.387Anolis_carolinensis
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSANAG00000020583-100100.000Aotus_nancymaae
MGP_SPRETEiJ_G0017790Srsf19680.198ENSANAG00000025417-9976.016Aotus_nancymaae
MGP_SPRETEiJ_G0017790Srsf17095.890ENSAMXG00000024373-9477.778Astyanax_mexicanus
MGP_SPRETEiJ_G0017790Srsf19491.632ENSAMXG00000035996srsf1a9893.145Astyanax_mexicanus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSBTAG00000014766SRSF1100100.000Bos_taurus
MGP_SPRETEiJ_G0017790Srsf19489.947ENSCJAG00000008111-8891.371Callithrix_jacchus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSCJAG00000041713-100100.000Callithrix_jacchus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSCAFG00000017430SRSF1100100.000Canis_familiaris
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSCAFG00020025632-100100.000Canis_lupus_dingo
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSCHIG00000010787SRSF1100100.000Capra_hircus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSTSYG00000013899-100100.000Carlito_syrichta
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSCPOG00000032681-100100.000Cavia_porcellus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSCCAG00000029484-100100.000Cebus_capucinus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSCATG00000042294-100100.000Cercocebus_atys
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSCLAG00000014707-100100.000Chinchilla_lanigera
MGP_SPRETEiJ_G0017790Srsf110099.209ENSCSAG00000005642-10099.209Chlorocebus_sabaeus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSCHOG00000001899SRSF1100100.000Choloepus_hoffmanni
MGP_SPRETEiJ_G0017790Srsf110098.814ENSCPBG00000009851-10098.814Chrysemys_picta_bellii
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSCANG00000029726-100100.000Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSCGRG00001000670Srsf1100100.000Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSCGRG00000005590Srsf1100100.000Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0017790Srsf19089.674ENSCSEG00000014272-9884.553Cynoglossus_semilaevis
MGP_SPRETEiJ_G0017790Srsf19283.500ENSCSEG00000009973-10080.303Cynoglossus_semilaevis
MGP_SPRETEiJ_G0017790Srsf19189.189ENSCVAG00000005458-9886.179Cyprinodon_variegatus
MGP_SPRETEiJ_G0017790Srsf19091.713ENSCVAG00000018617-9885.185Cyprinodon_variegatus
MGP_SPRETEiJ_G0017790Srsf19189.583ENSDARG00000057691srsf1a9892.095Danio_rerio
MGP_SPRETEiJ_G0017790Srsf19996.735ENSDARG00000017843srsf1b9996.735Danio_rerio
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSDNOG00000011737-100100.000Dasypus_novemcinctus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSDORG00000015082Srsf1100100.000Dipodomys_ordii
MGP_SPRETEiJ_G0017790Srsf19298.913ENSETEG00000005349-6398.913Echinops_telfairi
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSEASG00005002922-100100.000Equus_asinus_asinus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSECAG00000016654SRSF1100100.000Equus_caballus
MGP_SPRETEiJ_G0017790Srsf192100.000ENSEEUG00000009255-63100.000Erinaceus_europaeus
MGP_SPRETEiJ_G0017790Srsf19191.209ENSELUG00000021646srsf1a9879.839Esox_lucius
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSFCAG00000002250-100100.000Felis_catus
MGP_SPRETEiJ_G0017790Srsf110082.213ENSFALG00000005062-10082.213Ficedula_albicollis
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSFDAG00000010646-100100.000Fukomys_damarensis
MGP_SPRETEiJ_G0017790Srsf19091.713ENSFHEG00000003174srsf1a9885.185Fundulus_heteroclitus
MGP_SPRETEiJ_G0017790Srsf19088.333ENSGMOG00000014787-9982.645Gadus_morhua
MGP_SPRETEiJ_G0017790Srsf15577.586ENSGMOG00000014445-7380.303Gadus_morhua
MGP_SPRETEiJ_G0017790Srsf110098.790ENSGALG00000005525SRSF110098.790Gallus_gallus
MGP_SPRETEiJ_G0017790Srsf19286.413ENSGACG00000020621srsf1b10074.390Gasterosteus_aculeatus
MGP_SPRETEiJ_G0017790Srsf110098.814ENSGAGG00000022965-10098.814Gopherus_agassizii
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSGGOG00000004386SRSF1100100.000Gorilla_gorilla
MGP_SPRETEiJ_G0017790Srsf19090.556ENSHBUG00000016788srsf1a9884.774Haplochromis_burtoni
MGP_SPRETEiJ_G0017790Srsf189100.000ENSHGLG00000000600-100100.000Heterocephalus_glaber_female
MGP_SPRETEiJ_G0017790Srsf189100.000ENSHGLG00000000669-100100.000Heterocephalus_glaber_female
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSHGLG00100016906-100100.000Heterocephalus_glaber_male
MGP_SPRETEiJ_G0017790Srsf19088.108ENSHCOG00000018918srsf1a9781.928Hippocampus_comes
MGP_SPRETEiJ_G0017790Srsf19491.213ENSIPUG00000017039srsf1a9893.145Ictalurus_punctatus
MGP_SPRETEiJ_G0017790Srsf110095.968ENSIPUG00000008750srsf1b10095.968Ictalurus_punctatus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSSTOG00000000243-100100.000Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0017790Srsf16392.126ENSJJAG00000014464-9588.189Jaculus_jaculus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSJJAG00000000102-100100.000Jaculus_jaculus
MGP_SPRETEiJ_G0017790Srsf19090.055ENSKMAG00000019232srsf1a9883.951Kryptolebias_marmoratus
MGP_SPRETEiJ_G0017790Srsf19090.608ENSLBEG00000020864-9884.362Labrus_bergylta
MGP_SPRETEiJ_G0017790Srsf19282.888ENSLBEG00000015294-9883.133Labrus_bergylta
MGP_SPRETEiJ_G0017790Srsf19091.713ENSLACG00000014160srsf1a9293.878Latimeria_chalumnae
MGP_SPRETEiJ_G0017790Srsf110097.177ENSLOCG00000005994srsf1a10097.177Lepisosteus_oculatus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSLAFG00000025743SRSF1100100.000Loxodonta_africana
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSMFAG00000040003-100100.000Macaca_fascicularis
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSMMUG00000004725SRSF1100100.000Macaca_mulatta
MGP_SPRETEiJ_G0017790Srsf110097.233ENSMMUG00000003260-10097.233Macaca_mulatta
MGP_SPRETEiJ_G0017790Srsf110096.838ENSMNEG00000015983-10096.838Macaca_nemestrina
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSMNEG00000027680-100100.000Macaca_nemestrina
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSMLEG00000040509SRSF1100100.000Mandrillus_leucophaeus
MGP_SPRETEiJ_G0017790Srsf110094.466ENSMLEG00000015243-10094.466Mandrillus_leucophaeus
MGP_SPRETEiJ_G0017790Srsf19293.478ENSMAMG00000019691-10088.211Mastacembelus_armatus
MGP_SPRETEiJ_G0017790Srsf19288.587ENSMAMG00000019687-10085.081Mastacembelus_armatus
MGP_SPRETEiJ_G0017790Srsf19091.713ENSMAMG00000018454-9885.185Mastacembelus_armatus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSMAUG00000021845Srsf1100100.000Mesocricetus_auratus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSMICG00000013639-100100.000Microcebus_murinus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSMOCG00000001996Srsf1100100.000Microtus_ochrogaster
MGP_SPRETEiJ_G0017790Srsf19090.556ENSMMOG00000014354srsf1a9878.099Mola_mola
MGP_SPRETEiJ_G0017790Srsf19298.919ENSMODG00000014781-6398.919Monodelphis_domestica
MGP_SPRETEiJ_G0017790Srsf19091.160ENSMALG00000017129-7588.601Monopterus_albus
MGP_SPRETEiJ_G0017790Srsf19276.630ENSMALG00000007763-7979.695Monopterus_albus
MGP_SPRETEiJ_G0017790Srsf1100100.000MGP_CAROLIEiJ_G0016943Srsf1100100.000Mus_caroli
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSMUSG00000018379Srsf1100100.000Mus_musculus
MGP_SPRETEiJ_G0017790Srsf1100100.000MGP_PahariEiJ_G0018074Srsf1100100.000Mus_pahari
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSMPUG00000015369SRSF1100100.000Mustela_putorius_furo
MGP_SPRETEiJ_G0017790Srsf19287.500ENSMLUG00000023995-10090.323Myotis_lucifugus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSMLUG00000011040SRSF1100100.000Myotis_lucifugus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSNGAG00000011395Srsf1100100.000Nannospalax_galili
MGP_SPRETEiJ_G0017790Srsf110079.839ENSNBRG00000008041srsf1b8082.741Neolamprologus_brichardi
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSNLEG00000008088-100100.000Nomascus_leucogenys
MGP_SPRETEiJ_G0017790Srsf16398.425ENSMEUG00000002783-10098.425Notamacropus_eugenii
MGP_SPRETEiJ_G0017790Srsf189100.000ENSOPRG00000001234-100100.000Ochotona_princeps
MGP_SPRETEiJ_G0017790Srsf110099.597ENSODEG00000011481-10099.597Octodon_degus
MGP_SPRETEiJ_G0017790Srsf19090.055ENSONIG00000013160-9884.774Oreochromis_niloticus
MGP_SPRETEiJ_G0017790Srsf19690.717ENSONIG00000004860-8190.863Oreochromis_niloticus
MGP_SPRETEiJ_G0017790Srsf110070.238ENSOCUG00000010894-7771.795Oryctolagus_cuniculus
MGP_SPRETEiJ_G0017790Srsf19091.713ENSORLG00000004580srsf1a9885.185Oryzias_latipes
MGP_SPRETEiJ_G0017790Srsf19091.713ENSORLG00020009456srsf1a9885.185Oryzias_latipes_hni
MGP_SPRETEiJ_G0017790Srsf19092.222ENSORLG00015014384srsf1a9884.774Oryzias_latipes_hsok
MGP_SPRETEiJ_G0017790Srsf18190.798ENSOMEG00000004106srsf1a9282.743Oryzias_melastigma
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSOGAG00000025950-100100.000Otolemur_garnettii
MGP_SPRETEiJ_G0017790Srsf110095.161ENSOARG00000008323SRSF110095.161Ovis_aries
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSPPAG00000043403-100100.000Pan_paniscus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSPPRG00000004238-100100.000Panthera_pardus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSPTRG00000049077SRSF1100100.000Pan_troglodytes
MGP_SPRETEiJ_G0017790Srsf110077.075ENSPANG00000030275-10076.680Papio_anubis
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSPANG00000022305-100100.000Papio_anubis
MGP_SPRETEiJ_G0017790Srsf110095.968ENSPKIG00000012857srsf1b10095.968Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0017790Srsf19995.102ENSPKIG00000007204srsf1a9995.102Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0017790Srsf18996.774ENSPSIG00000009000-10092.000Pelodiscus_sinensis
MGP_SPRETEiJ_G0017790Srsf19487.113ENSPMGG00000013112-9985.654Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0017790Srsf19684.937ENSPMGG00000005467-9985.470Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSPEMG00000021416Srsf1100100.000Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0017790Srsf110099.197ENSPCIG00000006076-10099.197Phascolarctos_cinereus
MGP_SPRETEiJ_G0017790Srsf19189.617ENSPFOG00000018325-8685.714Poecilia_formosa
MGP_SPRETEiJ_G0017790Srsf19189.617ENSPLAG00000008416srsf1b9885.714Poecilia_latipinna
MGP_SPRETEiJ_G0017790Srsf16189.431ENSPMEG00000020607-9887.805Poecilia_mexicana
MGP_SPRETEiJ_G0017790Srsf16189.431ENSPMEG00000014312-9887.805Poecilia_mexicana
MGP_SPRETEiJ_G0017790Srsf19189.617ENSPMEG00000002388-9885.714Poecilia_mexicana
MGP_SPRETEiJ_G0017790Srsf19191.758ENSPREG00000009667srsf1a9885.185Poecilia_reticulata
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSPPYG00000008240SRSF1100100.000Pongo_abelii
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSPCAG00000005199SRSF1100100.000Procavia_capensis
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSPCOG00000023654-100100.000Propithecus_coquereli
MGP_SPRETEiJ_G0017790Srsf19772.500ENSPCOG00000025736-9576.531Propithecus_coquereli
MGP_SPRETEiJ_G0017790Srsf175100.000ENSPVAG00000000519-75100.000Pteropus_vampyrus
MGP_SPRETEiJ_G0017790Srsf19493.162ENSPNAG00000022241srsf1a9890.947Pygocentrus_nattereri
MGP_SPRETEiJ_G0017790Srsf110094.355ENSPNAG00000014601srsf1b10094.355Pygocentrus_nattereri
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSRNOG00000050323Srsf1100100.000Rattus_norvegicus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSRBIG00000034445-100100.000Rhinopithecus_bieti
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSRROG00000041506-100100.000Rhinopithecus_roxellana
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSSBOG00000025377-100100.000Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0017790Srsf110099.197ENSSHAG00000002552-10099.197Sarcophilus_harrisii
MGP_SPRETEiJ_G0017790Srsf19996.356ENSSFOG00015004800srsf1a9996.356Scleropages_formosus
MGP_SPRETEiJ_G0017790Srsf19487.083ENSSMAG00000009719-10086.275Scophthalmus_maximus
MGP_SPRETEiJ_G0017790Srsf19090.055ENSSMAG00000007018-9883.128Scophthalmus_maximus
MGP_SPRETEiJ_G0017790Srsf110076.494ENSSDUG00000003929-9977.510Seriola_dumerili
MGP_SPRETEiJ_G0017790Srsf19090.608ENSSDUG00000011303-9884.362Seriola_dumerili
MGP_SPRETEiJ_G0017790Srsf19090.608ENSSLDG00000010543-9884.362Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0017790Srsf19283.243ENSSLDG00000016868-9982.661Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0017790Srsf19582.812ENSSLDG00000016895-9976.113Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0017790Srsf192100.000ENSSARG00000010949-63100.000Sorex_araneus
MGP_SPRETEiJ_G0017790Srsf110098.814ENSSPUG00000000804-10098.814Sphenodon_punctatus
MGP_SPRETEiJ_G0017790Srsf19090.608ENSSPAG00000022562-9885.597Stegastes_partitus
MGP_SPRETEiJ_G0017790Srsf19287.755ENSSPAG00000014152-9984.556Stegastes_partitus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSSSCG00000017626-100100.000Sus_scrofa
MGP_SPRETEiJ_G0017790Srsf18996.774ENSTGUG00000008416-10098.370Taeniopygia_guttata
MGP_SPRETEiJ_G0017790Srsf19091.160ENSTRUG00000003691srsf1a9884.362Takifugu_rubripes
MGP_SPRETEiJ_G0017790Srsf19091.160ENSTNIG00000016223srsf1a9884.362Tetraodon_nigroviridis
MGP_SPRETEiJ_G0017790Srsf19298.370ENSTBEG00000015378-6398.370Tupaia_belangeri
MGP_SPRETEiJ_G0017790Srsf189100.000ENSTTRG00000007310SRSF1100100.000Tursiops_truncatus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSUAMG00000009858SRSF1100100.000Ursus_americanus
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSUMAG00000000455-100100.000Ursus_maritimus
MGP_SPRETEiJ_G0017790Srsf110099.597ENSVPAG00000010094SRSF110099.597Vicugna_pacos
MGP_SPRETEiJ_G0017790Srsf1100100.000ENSVVUG00000011882-100100.000Vulpes_vulpes
MGP_SPRETEiJ_G0017790Srsf110095.968ENSXETG00000008954srsf110091.386Xenopus_tropicalis
MGP_SPRETEiJ_G0017790Srsf19091.713ENSXMAG00000011766srsf1a9885.185Xiphophorus_maculatus

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