EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0017795 (Gene tree)
Gene ID
-
Gene Symbol
Msi2
Alias
Musashi2|msi2h
Full Name
musashi RNA-binding protein 2
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Minus strand
Length
386566 bases
Position
chr11:88993820-89380385
Accession
1923876
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0030544RRM_1PF00076.226.3e-3412
MGP_SPRETEiJ_P0030544RRM_1PF00076.226.3e-3422
MGP_SPRETEiJ_P0030545RRM_1PF00076.226.6e-3412
MGP_SPRETEiJ_P0030545RRM_1PF00076.226.6e-3422
MGP_SPRETEiJ_P0030548RRM_1PF00076.223.9e-2211
MGP_SPRETEiJ_P0030549RRM_1PF00076.223.9e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0030549-668-MGP_SPRETEiJ_P0030549158 (aa)--
MGP_SPRETEiJ_T0030548-405-MGP_SPRETEiJ_P0030548113 (aa)-UPI00004C9D67
MGP_SPRETEiJ_T0030547-2507--- (aa)--
MGP_SPRETEiJ_T0030546-1751--- (aa)--
MGP_SPRETEiJ_T0030545-1824-MGP_SPRETEiJ_P0030545346 (aa)-UPI00000285CD
MGP_SPRETEiJ_T0030544-6340-MGP_SPRETEiJ_P0030544328 (aa)-UPI00000E8884
MGP_SPRETEiJ_T0030550-627--- (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0017795's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0017795's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0017795Msi27031.250MGP_SPRETEiJ_G0027124Elavl27232.632
MGP_SPRETEiJ_G0017795Msi26033.824MGP_SPRETEiJ_G0018840Slirp7033.824
MGP_SPRETEiJ_G0017795Msi210090.323MGP_SPRETEiJ_G0028624Msi19975.665
MGP_SPRETEiJ_G0017795Msi210053.982MGP_SPRETEiJ_G0028443Hnrnpd10072.000
MGP_SPRETEiJ_G0017795Msi210054.867MGP_SPRETEiJ_G0028445Hnrnpdl7841.634
MGP_SPRETEiJ_G0017795Msi29942.400MGP_SPRETEiJ_G0016392Dazap19249.462
MGP_SPRETEiJ_G0017795Msi26141.429MGP_SPRETEiJ_G0016386Cirbp8843.243
MGP_SPRETEiJ_G0017795Msi28633.562MGP_SPRETEiJ_G0025665Rbm387038.095
MGP_SPRETEiJ_G0017795Msi210035.398MGP_SPRETEiJ_G0027798Tardbp7934.351
MGP_SPRETEiJ_G0017795Msi28430.208MGP_SPRETEiJ_G0027258Elavl47830.088
MGP_SPRETEiJ_G0017795Msi26142.857MGP_SPRETEiJ_G0034063Rbm38243.243
MGP_SPRETEiJ_G0017795Msi29941.228MGP_SPRETEiJ_G0019473Hnrnpa05941.989
MGP_SPRETEiJ_G0017795Msi26142.857MGP_SPRETEiJ_G0034253Rbmx8845.205
MGP_SPRETEiJ_G0017795Msi210052.212MGP_SPRETEiJ_G0017155Hnrnpab6752.000
MGP_SPRETEiJ_G0017795Msi210044.348MGP_SPRETEiJ_G0029379Hnrnpa2b16448.193
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0017795Msi2100100.000ENSG00000153944MSI2100100.000Homo_sapiens
MGP_SPRETEiJ_G0017795Msi210096.460ENSAPOG00000001658msi2a10087.805Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSAMEG00000002697MSI299100.000Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0017795Msi210088.182ENSACIG00000009475msi2a10074.490Amphilophus_citrinellus
MGP_SPRETEiJ_G0017795Msi29788.182ENSAOCG00000014822msi2a6976.000Amphiprion_ocellaris
MGP_SPRETEiJ_G0017795Msi210096.460ENSAPEG00000007706msi2a10087.805Amphiprion_percula
MGP_SPRETEiJ_G0017795Msi210096.460ENSATEG00000010498msi2a10087.805Anabas_testudineus
MGP_SPRETEiJ_G0017795Msi210094.118ENSATEG00000003301-10093.165Anabas_testudineus
MGP_SPRETEiJ_G0017795Msi210098.667ENSACAG00000005452MSI27495.455Anolis_carolinensis
MGP_SPRETEiJ_G0017795Msi2100100.000ENSANAG00000037827MSI210099.695Aotus_nancymaae
MGP_SPRETEiJ_G0017795Msi210096.460ENSACLG00000007752msi2a10087.500Astatotilapia_calliptera
MGP_SPRETEiJ_G0017795Msi210098.230ENSAMXG00000032796msi2a10091.489Astyanax_mexicanus
MGP_SPRETEiJ_G0017795Msi210099.115ENSAMXG00000010474msi2b9596.091Astyanax_mexicanus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSBTAG00000004406MSI29799.674Bos_taurus
MGP_SPRETEiJ_G0017795Msi210070.796WBGene00003423msi-17660.643Caenorhabditis_elegans
MGP_SPRETEiJ_G0017795Msi2100100.000ENSCJAG00000013998MSI210099.695Callithrix_jacchus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSCAFG00020025620MSI28198.746Canis_lupus_dingo
MGP_SPRETEiJ_G0017795Msi2100100.000ENSCHIG00000016580MSI210098.780Capra_hircus
MGP_SPRETEiJ_G0017795Msi29495.390ENSCPOG00000034042MSI29995.390Cavia_porcellus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSCCAG00000033927MSI210099.695Cebus_capucinus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSCATG00000040879MSI210098.476Cercocebus_atys
MGP_SPRETEiJ_G0017795Msi2100100.000ENSCLAG00000014325MSI210099.711Chinchilla_lanigera
MGP_SPRETEiJ_G0017795Msi2100100.000ENSCSAG00000005633MSI210099.695Chlorocebus_sabaeus
MGP_SPRETEiJ_G0017795Msi210080.000ENSCHOG00000008660MSI283100.000Choloepus_hoffmanni
MGP_SPRETEiJ_G0017795Msi210098.649ENSCPBG00000009942MSI29693.688Chrysemys_picta_bellii
MGP_SPRETEiJ_G0017795Msi210080.645ENSCING00000018579-9753.125Ciona_intestinalis
MGP_SPRETEiJ_G0017795Msi210065.574ENSCSAVG00000010397-7265.517Ciona_savignyi
MGP_SPRETEiJ_G0017795Msi2100100.000ENSCANG00000036414MSI2100100.000Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSCGRG00001013330Msi210099.696Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0017795Msi2100100.000ENSCGRG00000003141Msi210099.693Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0017795Msi210092.920ENSCSEG00000003266-10079.573Cynoglossus_semilaevis
MGP_SPRETEiJ_G0017795Msi27875.258ENSCSEG00000013557msi2a8373.711Cynoglossus_semilaevis
MGP_SPRETEiJ_G0017795Msi210092.920ENSCSEG00000013549msi2a10073.370Cynoglossus_semilaevis
MGP_SPRETEiJ_G0017795Msi210096.460ENSCVAG00000017075msi2a10087.179Cyprinodon_variegatus
MGP_SPRETEiJ_G0017795Msi210098.230ENSDARG00000032614msi2b10098.020Danio_rerio
MGP_SPRETEiJ_G0017795Msi210094.690ENSDARG00000033901msi2a10079.381Danio_rerio
MGP_SPRETEiJ_G0017795Msi2100100.000ENSDNOG00000014501MSI2100100.000Dasypus_novemcinctus
MGP_SPRETEiJ_G0017795Msi27888.832ENSDORG00000005394Msi28487.817Dipodomys_ordii
MGP_SPRETEiJ_G0017795Msi2100100.000ENSDORG00000028440-100100.000Dipodomys_ordii
MGP_SPRETEiJ_G0017795Msi29986.667FBgn0260943Rbp68868.750Drosophila_melanogaster
MGP_SPRETEiJ_G0017795Msi2100100.000ENSETEG00000012450-6476.316Echinops_telfairi
MGP_SPRETEiJ_G0017795Msi28990.099ENSEBUG00000006732msi2a8768.489Eptatretus_burgeri
MGP_SPRETEiJ_G0017795Msi2100100.000ENSEASG00005002965MSI29789.143Equus_asinus_asinus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSECAG00000011435MSI210097.175Equus_caballus
MGP_SPRETEiJ_G0017795Msi28285.375ENSEEUG00000007810MSI210085.375Erinaceus_europaeus
MGP_SPRETEiJ_G0017795Msi210098.230ENSELUG00000011747msi2a10089.024Esox_lucius
MGP_SPRETEiJ_G0017795Msi210097.345ENSELUG00000001361msi2b10087.143Esox_lucius
MGP_SPRETEiJ_G0017795Msi29687.156ENSFCAG00000033787-9271.930Felis_catus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSFCAG00000041686MSI210099.695Felis_catus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSFDAG00000016118MSI2100100.000Fukomys_damarensis
MGP_SPRETEiJ_G0017795Msi210096.460ENSFHEG00000000084msi2a9692.763Fundulus_heteroclitus
MGP_SPRETEiJ_G0017795Msi27396.341ENSGMOG00000007596-10092.308Gadus_morhua
MGP_SPRETEiJ_G0017795Msi210098.230ENSGALG00000005567MSI210096.243Gallus_gallus
MGP_SPRETEiJ_G0017795Msi210096.460ENSGAFG00000006974msi2a9093.377Gambusia_affinis
MGP_SPRETEiJ_G0017795Msi210098.947ENSGAGG00000016542MSI210096.053Gopherus_agassizii
MGP_SPRETEiJ_G0017795Msi2100100.000ENSGGOG00000013182MSI2100100.000Gorilla_gorilla
MGP_SPRETEiJ_G0017795Msi210096.460ENSHBUG00000020800msi2a10087.500Haplochromis_burtoni
MGP_SPRETEiJ_G0017795Msi210090.751ENSHGLG00000012444MSI210090.751Heterocephalus_glaber_female
MGP_SPRETEiJ_G0017795Msi2100100.000ENSHGLG00100004028-87100.000Heterocephalus_glaber_male
MGP_SPRETEiJ_G0017795Msi276100.000ENSHGLG00100003744MSI2100100.000Heterocephalus_glaber_male
MGP_SPRETEiJ_G0017795Msi210095.575ENSHCOG00000000266msi2a9784.795Hippocampus_comes
MGP_SPRETEiJ_G0017795Msi210086.275ENSHCOG00000017241-7781.557Hippocampus_comes
MGP_SPRETEiJ_G0017795Msi210099.115ENSIPUG00000003732msi2b9294.286Ictalurus_punctatus
MGP_SPRETEiJ_G0017795Msi210096.460ENSIPUG00000021097msi2a10086.890Ictalurus_punctatus
MGP_SPRETEiJ_G0017795Msi29495.390ENSSTOG00000007884MSI29995.390Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSJJAG00000009467-100100.000Jaculus_jaculus
MGP_SPRETEiJ_G0017795Msi27688.889ENSJJAG00000006292-10088.406Jaculus_jaculus
MGP_SPRETEiJ_G0017795Msi210095.575ENSKMAG00000009494msi2a9691.401Kryptolebias_marmoratus
MGP_SPRETEiJ_G0017795Msi210083.529ENSLBEG00000026223-10068.915Labrus_bergylta
MGP_SPRETEiJ_G0017795Msi210096.460ENSLBEG00000007061msi2a10087.805Labrus_bergylta
MGP_SPRETEiJ_G0017795Msi27396.386ENSLACG00000016798MSI29892.308Latimeria_chalumnae
MGP_SPRETEiJ_G0017795Msi210098.230ENSLOCG00000004675msi2b10083.740Lepisosteus_oculatus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSMFAG00000003775MSI2100100.000Macaca_fascicularis
MGP_SPRETEiJ_G0017795Msi2100100.000ENSMMUG00000002069MSI2100100.000Macaca_mulatta
MGP_SPRETEiJ_G0017795Msi2100100.000ENSMNEG00000045275MSI210099.695Macaca_nemestrina
MGP_SPRETEiJ_G0017795Msi2100100.000ENSMLEG00000033888MSI2100100.000Mandrillus_leucophaeus
MGP_SPRETEiJ_G0017795Msi210096.460ENSMAMG00000010503msi2a10086.280Mastacembelus_armatus
MGP_SPRETEiJ_G0017795Msi210095.575ENSMAMG00000002488-9992.053Mastacembelus_armatus
MGP_SPRETEiJ_G0017795Msi210096.460ENSMZEG00005007676msi2a10092.073Maylandia_zebra
MGP_SPRETEiJ_G0017795Msi2100100.000ENSMAUG00000003862Msi210099.712Mesocricetus_auratus
MGP_SPRETEiJ_G0017795Msi210086.726ENSMICG00000032913-10079.279Microcebus_murinus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSMICG00000013598-10099.695Microcebus_murinus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSMOCG00000005820Msi2100100.000Microtus_ochrogaster
MGP_SPRETEiJ_G0017795Msi210094.690ENSMMOG00000008348msi2a9184.858Mola_mola
MGP_SPRETEiJ_G0017795Msi27698.551ENSMODG00000014790MSI210098.551Monodelphis_domestica
MGP_SPRETEiJ_G0017795Msi210096.460ENSMALG00000000071msi2a10092.810Monopterus_albus
MGP_SPRETEiJ_G0017795Msi2100100.000MGP_CAROLIEiJ_G0016948Msi2100100.000Mus_caroli
MGP_SPRETEiJ_G0017795Msi2100100.000ENSMUSG00000069769Msi2100100.000Mus_musculus
MGP_SPRETEiJ_G0017795Msi2100100.000MGP_PahariEiJ_G0018079Msi2100100.000Mus_pahari
MGP_SPRETEiJ_G0017795Msi2100100.000ENSMPUG00000015377MSI297100.000Mustela_putorius_furo
MGP_SPRETEiJ_G0017795Msi210099.115ENSMLUG00000007865MSI29799.674Myotis_lucifugus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSNGAG00000017807Msi2100100.000Nannospalax_galili
MGP_SPRETEiJ_G0017795Msi210096.460ENSNBRG00000014596msi2a10087.500Neolamprologus_brichardi
MGP_SPRETEiJ_G0017795Msi2100100.000ENSNLEG00000008059MSI2100100.000Nomascus_leucogenys
MGP_SPRETEiJ_G0017795Msi299100.000ENSOPRG00000000872-6488.816Ochotona_princeps
MGP_SPRETEiJ_G0017795Msi2100100.000ENSODEG00000011974MSI210099.711Octodon_degus
MGP_SPRETEiJ_G0017795Msi210096.460ENSONIG00000001972msi2a8493.377Oreochromis_niloticus
MGP_SPRETEiJ_G0017795Msi210099.115ENSOANG00000005667MSI27795.745Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSOCUG00000010440MSI297100.000Oryctolagus_cuniculus
MGP_SPRETEiJ_G0017795Msi210096.460ENSORLG00000009671msi2a9592.357Oryzias_latipes
MGP_SPRETEiJ_G0017795Msi210096.460ENSORLG00020021556msi2a9493.151Oryzias_latipes_hni
MGP_SPRETEiJ_G0017795Msi210096.460ENSORLG00015004592msi2a9592.357Oryzias_latipes_hsok
MGP_SPRETEiJ_G0017795Msi210096.460ENSOMEG00000000146msi2a9891.694Oryzias_melastigma
MGP_SPRETEiJ_G0017795Msi2100100.000ENSOGAG00000005621MSI29995.440Otolemur_garnettii
MGP_SPRETEiJ_G0017795Msi2100100.000ENSPPAG00000037697MSI2100100.000Pan_paniscus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSPPRG00000001848MSI294100.000Panthera_pardus
MGP_SPRETEiJ_G0017795Msi210079.817ENSPTIG00000021873-9278.512Panthera_tigris_altaica
MGP_SPRETEiJ_G0017795Msi2100100.000ENSPTIG00000021678MSI296100.000Panthera_tigris_altaica
MGP_SPRETEiJ_G0017795Msi2100100.000ENSPTRG00000009437MSI2100100.000Pan_troglodytes
MGP_SPRETEiJ_G0017795Msi2100100.000ENSPANG00000022319MSI210099.695Papio_anubis
MGP_SPRETEiJ_G0017795Msi26195.652ENSPKIG00000017107-8191.209Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0017795Msi210095.575ENSPKIG00000007038-9685.758Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0017795Msi210099.115ENSPSIG00000008618MSI28796.269Pelodiscus_sinensis
MGP_SPRETEiJ_G0017795Msi210088.182ENSPMGG00000005888msi2a10087.195Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSPEMG00000021793-100100.000Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0017795Msi210099.115ENSPCIG00000006063MSI210095.198Phascolarctos_cinereus
MGP_SPRETEiJ_G0017795Msi27393.976ENSPFOG00000019337MSI29290.476Poecilia_formosa
MGP_SPRETEiJ_G0017795Msi210096.460ENSPLAG00000000436msi2a7690.141Poecilia_latipinna
MGP_SPRETEiJ_G0017795Msi29788.182ENSPMEG00000013247msi2a8079.021Poecilia_mexicana
MGP_SPRETEiJ_G0017795Msi210096.460ENSPREG00000000881msi2a9985.366Poecilia_reticulata
MGP_SPRETEiJ_G0017795Msi2100100.000ENSPPYG00000008244-10096.639Pongo_abelii
MGP_SPRETEiJ_G0017795Msi27370.588ENSPCAG00000010552MSI210070.588Procavia_capensis
MGP_SPRETEiJ_G0017795Msi2100100.000ENSPCOG00000019195-9399.237Propithecus_coquereli
MGP_SPRETEiJ_G0017795Msi2100100.000ENSPVAG00000017053MSI210090.785Pteropus_vampyrus
MGP_SPRETEiJ_G0017795Msi210096.460ENSPNYG00000018393msi2a10092.073Pundamilia_nyererei
MGP_SPRETEiJ_G0017795Msi210097.345ENSPNAG00000014957msi2a10091.793Pygocentrus_nattereri
MGP_SPRETEiJ_G0017795Msi210099.115ENSPNAG00000000844msi2b10088.450Pygocentrus_nattereri
MGP_SPRETEiJ_G0017795Msi2100100.000ENSRNOG00000025338Msi2100100.000Rattus_norvegicus
MGP_SPRETEiJ_G0017795Msi25881.319ENSRBIG00000032064-8481.319Rhinopithecus_bieti
MGP_SPRETEiJ_G0017795Msi2100100.000ENSRROG00000034421-9299.130Rhinopithecus_roxellana
MGP_SPRETEiJ_G0017795Msi2100100.000ENSSBOG00000026425MSI2100100.000Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0017795Msi210099.115ENSSHAG00000008672MSI210098.765Sarcophilus_harrisii
MGP_SPRETEiJ_G0017795Msi210092.035ENSSFOG00015021687-9787.948Scleropages_formosus
MGP_SPRETEiJ_G0017795Msi29682.041ENSSFOG00015012168msi2b8282.041Scleropages_formosus
MGP_SPRETEiJ_G0017795Msi210096.460ENSSMAG00000018484msi2a10087.805Scophthalmus_maximus
MGP_SPRETEiJ_G0017795Msi210096.460ENSSDUG00000014507msi2a10087.805Seriola_dumerili
MGP_SPRETEiJ_G0017795Msi210094.690ENSSDUG00000021968-9991.391Seriola_dumerili
MGP_SPRETEiJ_G0017795Msi210096.460ENSSLDG00000017172msi2a10087.805Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0017795Msi25291.525ENSSLDG00000021332-6874.725Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0017795Msi210098.230ENSSPUG00000000913-9493.671Sphenodon_punctatus
MGP_SPRETEiJ_G0017795Msi210096.460ENSSPAG00000017793msi2a9685.714Stegastes_partitus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSSSCG00000038505MSI210099.695Sus_scrofa
MGP_SPRETEiJ_G0017795Msi27699.034ENSTGUG00000008452MSI210099.034Taeniopygia_guttata
MGP_SPRETEiJ_G0017795Msi210096.460ENSTRUG00000021248msi2a10086.567Takifugu_rubripes
MGP_SPRETEiJ_G0017795Msi210084.071ENSTBEG00000001241MSI27382.231Tupaia_belangeri
MGP_SPRETEiJ_G0017795Msi2100100.000ENSTTRG00000002189MSI210090.756Tursiops_truncatus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSUAMG00000000700MSI297100.000Ursus_americanus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSUMAG00000000505MSI29592.075Ursus_maritimus
MGP_SPRETEiJ_G0017795Msi2100100.000ENSVPAG00000006837-6284.615Vicugna_pacos
MGP_SPRETEiJ_G0017795Msi2100100.000ENSVVUG00000011783MSI210099.711Vulpes_vulpes
MGP_SPRETEiJ_G0017795Msi210094.690ENSXCOG00000006113msi2a10077.979Xiphophorus_couchianus
MGP_SPRETEiJ_G0017795Msi210096.460ENSXMAG00000000608msi2a10087.179Xiphophorus_maculatus

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