EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0017910 (Gene tree)
Gene ID: -
Gene Symbol: Cwc25
Alias: 1300013D05Rik|Ccdc49|R75228
Full Name: CWC25 spliceosome-associated protein
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 21982 bases
Position: chr11:99074969-99096950
Accession: 1914730
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0030986	CWC25	PF12542.8	1.8e-19	1	1
MGP_SPRETEiJ_P0030988	CWC25	PF12542.8	3.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0030987	-	686	-	MGP_SPRETEiJ_P0030987	131 (aa)	-	-
MGP_SPRETEiJ_T0030986	-	3087	-	MGP_SPRETEiJ_P0030986	416 (aa)	-	-
MGP_SPRETEiJ_T0030985	-	2432	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0030988	-	1836	-	MGP_SPRETEiJ_P0030988	180 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0017910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0017910's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0017910	Cwc25	100	88.471	ENSG00000273559	CWC25	94	100.000	Homo_sapiens
MGP_SPRETEiJ_G0017910	Cwc25	100	85.412	ENSAMEG00000004292	CWC25	100	85.412	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0017910	Cwc25	79	73.944	ENSAPEG00000013237	cwc25	100	53.132	Amphiprion_percula
MGP_SPRETEiJ_G0017910	Cwc25	79	74.648	ENSATEG00000000799	cwc25	100	53.613	Anabas_testudineus
MGP_SPRETEiJ_G0017910	Cwc25	99	67.217	ENSAPLG00000003710	CWC25	99	67.217	Anas_platyrhynchos
MGP_SPRETEiJ_G0017910	Cwc25	79	90.845	ENSACAG00000013140	CWC25	100	65.707	Anolis_carolinensis
MGP_SPRETEiJ_G0017910	Cwc25	90	88.554	ENSANAG00000033550	CWC25	91	85.714	Aotus_nancymaae
MGP_SPRETEiJ_G0017910	Cwc25	79	73.427	ENSACLG00000009352	cwc25	100	54.779	Astatotilapia_calliptera
MGP_SPRETEiJ_G0017910	Cwc25	79	74.825	ENSAMXG00000035125	cwc25	99	50.358	Astyanax_mexicanus
MGP_SPRETEiJ_G0017910	Cwc25	100	88.000	ENSBTAG00000030591	CWC25	100	87.765	Bos_taurus
MGP_SPRETEiJ_G0017910	Cwc25	100	85.647	ENSCJAG00000008289	CWC25	100	85.647	Callithrix_jacchus
MGP_SPRETEiJ_G0017910	Cwc25	100	84.000	ENSCAFG00000016561	CWC25	100	84.000	Canis_familiaris
MGP_SPRETEiJ_G0017910	Cwc25	100	83.765	ENSCAFG00020023017	CWC25	100	83.765	Canis_lupus_dingo
MGP_SPRETEiJ_G0017910	Cwc25	100	87.529	ENSCHIG00000015063	CWC25	100	87.294	Capra_hircus
MGP_SPRETEiJ_G0017910	Cwc25	100	79.812	ENSTSYG00000011332	CWC25	100	76.526	Carlito_syrichta
MGP_SPRETEiJ_G0017910	Cwc25	99	75.534	ENSCAPG00000014542	CWC25	99	77.488	Cavia_aperea
MGP_SPRETEiJ_G0017910	Cwc25	100	77.197	ENSCPOG00000015127	CWC25	100	78.622	Cavia_porcellus
MGP_SPRETEiJ_G0017910	Cwc25	100	87.028	ENSCCAG00000028719	CWC25	100	87.028	Cebus_capucinus
MGP_SPRETEiJ_G0017910	Cwc25	100	82.670	ENSCATG00000040771	CWC25	100	83.059	Cercocebus_atys
MGP_SPRETEiJ_G0017910	Cwc25	84	95.395	ENSCLAG00000017102	CWC25	92	95.395	Chinchilla_lanigera
MGP_SPRETEiJ_G0017910	Cwc25	100	87.529	ENSCSAG00000002654	CWC25	100	87.059	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0017910	Cwc25	99	74.109	ENSCPBG00000027490	CWC25	88	71.394	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0017910	Cwc25	100	82.201	ENSCANG00000037099	CWC25	100	82.588	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0017910	Cwc25	100	93.556	ENSCGRG00001020785	Cwc25	100	93.556	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0017910	Cwc25	100	93.556	ENSCGRG00000005085	Cwc25	100	93.556	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0017910	Cwc25	79	74.648	ENSCVAG00000007828	cwc25	100	52.448	Cyprinodon_variegatus
MGP_SPRETEiJ_G0017910	Cwc25	79	74.126	ENSDARG00000003382	cwc25	100	50.812	Danio_rerio
MGP_SPRETEiJ_G0017910	Cwc25	100	86.854	ENSDNOG00000042410	CWC25	100	85.211	Dasypus_novemcinctus
MGP_SPRETEiJ_G0017910	Cwc25	100	88.389	ENSDORG00000003061	Cwc25	100	88.389	Dipodomys_ordii
MGP_SPRETEiJ_G0017910	Cwc25	79	42.593	FBgn0031452	Cwc25	54	42.553	Drosophila_melanogaster
MGP_SPRETEiJ_G0017910	Cwc25	95	57.310	ENSEBUG00000002947	cwc25	95	57.310	Eptatretus_burgeri
MGP_SPRETEiJ_G0017910	Cwc25	100	87.059	ENSEASG00005001871	CWC25	100	87.059	Equus_asinus_asinus
MGP_SPRETEiJ_G0017910	Cwc25	100	87.294	ENSECAG00000019122	CWC25	100	87.294	Equus_caballus
MGP_SPRETEiJ_G0017910	Cwc25	100	85.176	ENSFCAG00000028119	CWC25	100	85.176	Felis_catus
MGP_SPRETEiJ_G0017910	Cwc25	99	59.122	ENSFALG00000013293	CWC25	99	58.255	Ficedula_albicollis
MGP_SPRETEiJ_G0017910	Cwc25	79	95.775	ENSFDAG00000007745	CWC25	100	74.883	Fukomys_damarensis
MGP_SPRETEiJ_G0017910	Cwc25	79	69.718	ENSGMOG00000013001	cwc25	67	71.687	Gadus_morhua
MGP_SPRETEiJ_G0017910	Cwc25	100	73.176	ENSGALG00000001624	CWC25	100	70.476	Gallus_gallus
MGP_SPRETEiJ_G0017910	Cwc25	79	73.239	ENSGAFG00000007492	cwc25	100	51.522	Gambusia_affinis
MGP_SPRETEiJ_G0017910	Cwc25	100	74.707	ENSGAGG00000022972	CWC25	100	72.275	Gopherus_agassizii
MGP_SPRETEiJ_G0017910	Cwc25	100	88.000	ENSGGOG00000007083	CWC25	100	88.000	Gorilla_gorilla
MGP_SPRETEiJ_G0017910	Cwc25	79	72.727	ENSHBUG00000001392	cwc25	100	54.651	Haplochromis_burtoni
MGP_SPRETEiJ_G0017910	Cwc25	100	78.923	ENSHGLG00000014785	CWC25	100	77.283	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0017910	Cwc25	79	97.902	ENSHGLG00100017354	CWC25	100	76.047	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0017910	Cwc25	100	86.588	ENSSTOG00000014268	CWC25	100	87.294	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0017910	Cwc25	100	52.927	ENSKMAG00000015418	cwc25	99	53.738	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0017910	Cwc25	85	52.528	ENSLACG00000001743	CWC25	100	50.986	Latimeria_chalumnae
MGP_SPRETEiJ_G0017910	Cwc25	79	75.524	ENSLOCG00000013707	cwc25	58	64.876	Lepisosteus_oculatus
MGP_SPRETEiJ_G0017910	Cwc25	100	85.511	ENSLAFG00000002238	CWC25	100	85.511	Loxodonta_africana
MGP_SPRETEiJ_G0017910	Cwc25	85	86.150	ENSMFAG00000002357	CWC25	100	86.150	Macaca_fascicularis
MGP_SPRETEiJ_G0017910	Cwc25	85	86.150	ENSMMUG00000002944	CWC25	90	86.150	Macaca_mulatta
MGP_SPRETEiJ_G0017910	Cwc25	100	88.235	ENSMNEG00000033729	CWC25	100	88.235	Macaca_nemestrina
MGP_SPRETEiJ_G0017910	Cwc25	91	87.597	ENSMLEG00000033355	CWC25	99	87.597	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0017910	Cwc25	100	53.162	ENSMAMG00000005194	cwc25	100	51.628	Mastacembelus_armatus
MGP_SPRETEiJ_G0017910	Cwc25	79	73.427	ENSMZEG00005012421	cwc25	100	54.779	Maylandia_zebra
MGP_SPRETEiJ_G0017910	Cwc25	99	71.831	ENSMGAG00000005158	CWC25	99	69.596	Meleagris_gallopavo
MGP_SPRETEiJ_G0017910	Cwc25	100	88.706	ENSMICG00000003004	CWC25	100	88.706	Microcebus_murinus
MGP_SPRETEiJ_G0017910	Cwc25	100	92.840	ENSMOCG00000000224	Cwc25	100	92.840	Microtus_ochrogaster
MGP_SPRETEiJ_G0017910	Cwc25	100	79.529	ENSMODG00000012627	CWC25	100	80.235	Monodelphis_domestica
MGP_SPRETEiJ_G0017910	Cwc25	100	95.913	MGP_CAROLIEiJ_G0017064	Cwc25	100	95.913	Mus_caroli
MGP_SPRETEiJ_G0017910	Cwc25	100	99.279	ENSMUSG00000018541	Cwc25	100	99.279	Mus_musculus
MGP_SPRETEiJ_G0017910	Cwc25	100	94.484	MGP_PahariEiJ_G0018193	Cwc25	100	94.245	Mus_pahari
MGP_SPRETEiJ_G0017910	Cwc25	100	84.706	ENSMPUG00000015077	CWC25	100	84.235	Mustela_putorius_furo
MGP_SPRETEiJ_G0017910	Cwc25	79	99.301	ENSMLUG00000029248	-	98	98.802	Myotis_lucifugus
MGP_SPRETEiJ_G0017910	Cwc25	100	86.824	ENSMLUG00000029653	CWC25	100	87.059	Myotis_lucifugus
MGP_SPRETEiJ_G0017910	Cwc25	100	88.416	ENSNGAG00000007394	Cwc25	100	87.943	Nannospalax_galili
MGP_SPRETEiJ_G0017910	Cwc25	100	87.765	ENSNLEG00000000617	CWC25	100	87.765	Nomascus_leucogenys
MGP_SPRETEiJ_G0017910	Cwc25	99	80.668	ENSMEUG00000004156	CWC25	100	79.952	Notamacropus_eugenii
MGP_SPRETEiJ_G0017910	Cwc25	85	68.889	ENSOPRG00000001941	CWC25	100	68.333	Ochotona_princeps
MGP_SPRETEiJ_G0017910	Cwc25	100	77.990	ENSODEG00000017487	CWC25	100	78.095	Octodon_degus
MGP_SPRETEiJ_G0017910	Cwc25	79	73.427	ENSONIG00000003251	cwc25	100	55.220	Oreochromis_niloticus
MGP_SPRETEiJ_G0017910	Cwc25	79	93.662	ENSOANG00000001231	-	100	69.072	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0017910	Cwc25	100	85.647	ENSOCUG00000013906	CWC25	100	85.176	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0017910	Cwc25	100	51.415	ENSORLG00000018569	cwc25	100	52.830	Oryzias_latipes
MGP_SPRETEiJ_G0017910	Cwc25	100	51.064	ENSORLG00020012087	cwc25	100	53.191	Oryzias_latipes_hni
MGP_SPRETEiJ_G0017910	Cwc25	100	50.591	ENSORLG00015011062	cwc25	100	51.773	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0017910	Cwc25	79	71.329	ENSOMEG00000019365	cwc25	100	50.827	Oryzias_melastigma
MGP_SPRETEiJ_G0017910	Cwc25	79	99.301	ENSOGAG00000008785	CWC25	100	77.962	Otolemur_garnettii
MGP_SPRETEiJ_G0017910	Cwc25	100	87.294	ENSOARG00000009937	CWC25	100	87.059	Ovis_aries
MGP_SPRETEiJ_G0017910	Cwc25	100	88.471	ENSPPAG00000023487	CWC25	100	88.471	Pan_paniscus
MGP_SPRETEiJ_G0017910	Cwc25	100	85.412	ENSPPRG00000005029	CWC25	100	85.412	Panthera_pardus
MGP_SPRETEiJ_G0017910	Cwc25	100	85.412	ENSPTIG00000020264	CWC25	100	85.412	Panthera_tigris_altaica
MGP_SPRETEiJ_G0017910	Cwc25	100	88.235	ENSPTRG00000009077	CWC25	100	88.235	Pan_troglodytes
MGP_SPRETEiJ_G0017910	Cwc25	100	88.235	ENSPANG00000022017	CWC25	100	88.235	Papio_anubis
MGP_SPRETEiJ_G0017910	Cwc25	79	72.727	ENSPKIG00000007116	cwc25	100	49.882	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0017910	Cwc25	88	70.479	ENSPSIG00000011817	CWC25	99	65.860	Pelodiscus_sinensis
MGP_SPRETEiJ_G0017910	Cwc25	100	90.692	ENSPEMG00000000026	Cwc25	100	90.692	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0017910	Cwc25	100	80.000	ENSPCIG00000002943	CWC25	100	79.294	Phascolarctos_cinereus
MGP_SPRETEiJ_G0017910	Cwc25	79	73.944	ENSPFOG00000017152	cwc25	100	51.756	Poecilia_formosa
MGP_SPRETEiJ_G0017910	Cwc25	96	48.792	ENSPLAG00000004535	cwc25	100	49.878	Poecilia_latipinna
MGP_SPRETEiJ_G0017910	Cwc25	79	73.944	ENSPMEG00000023752	cwc25	100	51.756	Poecilia_mexicana
MGP_SPRETEiJ_G0017910	Cwc25	100	87.294	ENSPPYG00000008503	CWC25	100	87.294	Pongo_abelii
MGP_SPRETEiJ_G0017910	Cwc25	76	99.270	ENSPCAG00000000433	CWC25	100	77.546	Procavia_capensis
MGP_SPRETEiJ_G0017910	Cwc25	100	88.235	ENSPCOG00000023678	CWC25	100	88.235	Propithecus_coquereli
MGP_SPRETEiJ_G0017910	Cwc25	99	86.635	ENSPVAG00000002273	CWC25	100	86.158	Pteropus_vampyrus
MGP_SPRETEiJ_G0017910	Cwc25	100	94.231	ENSRNOG00000004091	Cwc25	100	93.510	Rattus_norvegicus
MGP_SPRETEiJ_G0017910	Cwc25	100	88.000	ENSRBIG00000033457	CWC25	100	88.000	Rhinopithecus_bieti
MGP_SPRETEiJ_G0017910	Cwc25	100	88.235	ENSRROG00000039968	CWC25	100	88.235	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0017910	Cwc25	50	36.364	YNL245C	-	54	35.417	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0017910	Cwc25	100	81.647	ENSSHAG00000017267	CWC25	100	81.176	Sarcophilus_harrisii
MGP_SPRETEiJ_G0017910	Cwc25	85	73.130	ENSSARG00000006871	CWC25	100	75.346	Sorex_araneus
MGP_SPRETEiJ_G0017910	Cwc25	100	72.897	ENSSPUG00000018024	CWC25	100	71.729	Sphenodon_punctatus
MGP_SPRETEiJ_G0017910	Cwc25	100	86.588	ENSSSCG00000021478	CWC25	100	86.824	Sus_scrofa
MGP_SPRETEiJ_G0017910	Cwc25	99	64.303	ENSTGUG00000003011	CWC25	100	64.303	Taeniopygia_guttata
MGP_SPRETEiJ_G0017910	Cwc25	100	51.395	ENSTRUG00000004650	cwc25	100	52.113	Takifugu_rubripes
MGP_SPRETEiJ_G0017910	Cwc25	76	99.270	ENSTBEG00000013187	CWC25	100	75.179	Tupaia_belangeri
MGP_SPRETEiJ_G0017910	Cwc25	99	87.112	ENSTTRG00000006662	CWC25	100	87.351	Tursiops_truncatus
MGP_SPRETEiJ_G0017910	Cwc25	100	85.176	ENSUAMG00000005592	CWC25	100	85.412	Ursus_americanus
MGP_SPRETEiJ_G0017910	Cwc25	100	84.941	ENSUMAG00000017097	CWC25	100	85.176	Ursus_maritimus
MGP_SPRETEiJ_G0017910	Cwc25	99	77.590	ENSVPAG00000005680	CWC25	100	77.590	Vicugna_pacos
MGP_SPRETEiJ_G0017910	Cwc25	100	83.765	ENSVVUG00000002182	CWC25	100	83.765	Vulpes_vulpes
MGP_SPRETEiJ_G0017910	Cwc25	76	85.401	ENSXETG00000023722	cwc25	100	61.353	Xenopus_tropicalis