EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0017917 (Gene tree)
Gene ID: -
Gene Symbol: Arl5c
Alias: Arl12
Full Name: ADP-ribosylation factor-like 5C
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 8561 bases
Position: chr11:99342795-99351355
Accession: 3028577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0031020	MMR_HSR1	PF01926.23	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0031021	-	715	-	MGP_SPRETEiJ_P0031021	98 (aa)	-	UPI00001E6522
MGP_SPRETEiJ_T0031020	-	1592	-	MGP_SPRETEiJ_P0031020	179 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0017917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0017917's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0017917	Arl5c	99	39.665	MGP_SPRETEiJ_G0023960	Arl3	98	39.665
MGP_SPRETEiJ_G0017917	Arl5c	88	41.772	MGP_SPRETEiJ_G0023508	Arl2	86	41.772
MGP_SPRETEiJ_G0017917	Arl5c	88	37.500	MGP_SPRETEiJ_G0026008	Arl14	83	37.500
MGP_SPRETEiJ_G0017917	Arl5c	98	72.000	MGP_SPRETEiJ_G0024478	Arl5a	98	72.000
MGP_SPRETEiJ_G0017917	Arl5c	98	37.569	MGP_SPRETEiJ_G0021760	Arl6	97	37.569
MGP_SPRETEiJ_G0017917	Arl5c	98	44.886	MGP_SPRETEiJ_G0018131	Arf2	97	44.886
MGP_SPRETEiJ_G0017917	Arl5c	86	36.250	MGP_SPRETEiJ_G0018070	Arl4d	80	36.250
MGP_SPRETEiJ_G0017917	Arl5c	98	44.318	MGP_SPRETEiJ_G0021141	Arf3	97	44.318
MGP_SPRETEiJ_G0017917	Arl5c	98	73.714	MGP_SPRETEiJ_G0024113	Arl5b	97	73.714
MGP_SPRETEiJ_G0017917	Arl5c	96	42.775	MGP_SPRETEiJ_G0029156	Arf5	96	42.775
MGP_SPRETEiJ_G0017917	Arl5c	63	31.667	MGP_SPRETEiJ_G0018231	Rab37	55	31.667
MGP_SPRETEiJ_G0017917	Arl5c	89	45.283	MGP_SPRETEiJ_G0016530	Arl1	96	43.931
MGP_SPRETEiJ_G0017917	Arl5c	87	39.744	MGP_SPRETEiJ_G0020274	Arl11	89	39.744
MGP_SPRETEiJ_G0017917	Arl5c	63	31.579	MGP_SPRETEiJ_G0019417	Arl10	55	31.579
MGP_SPRETEiJ_G0017917	Arl5c	72	32.353	MGP_SPRETEiJ_G0033731	Srprb	51	32.353
MGP_SPRETEiJ_G0017917	Arl5c	84	41.509	MGP_SPRETEiJ_G0015206	Arl4c	82	41.509
MGP_SPRETEiJ_G0017917	Arl5c	87	39.506	MGP_SPRETEiJ_G0018557	Arl4a	81	39.506
MGP_SPRETEiJ_G0017917	Arl5c	96	37.705	MGP_SPRETEiJ_G0025731	Arfrp1	93	40.708

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0017917	Arl5c	100	84.358	ENSAMEG00000004195	ARL5C	99	84.358	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0017917	Arl5c	99	79.775	ENSACAG00000003879	-	99	79.775	Anolis_carolinensis
MGP_SPRETEiJ_G0017917	Arl5c	100	88.268	ENSCAFG00000016525	ARL5C	100	88.268	Canis_familiaris
MGP_SPRETEiJ_G0017917	Arl5c	100	88.268	ENSCHIG00000008208	ARL5C	100	88.268	Capra_hircus
MGP_SPRETEiJ_G0017917	Arl5c	59	86.792	ENSCHOG00000013232	-	100	86.792	Choloepus_hoffmanni
MGP_SPRETEiJ_G0017917	Arl5c	99	87.571	ENSCGRG00001000695	Arl5c	99	87.571	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0017917	Arl5c	99	88.136	ENSCGRG00000007376	Arl5c	99	88.136	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0017917	Arl5c	100	88.827	ENSDNOG00000019741	ARL5C	100	88.827	Dasypus_novemcinctus
MGP_SPRETEiJ_G0017917	Arl5c	100	86.592	ENSDORG00000016304	Arl5c	100	86.592	Dipodomys_ordii
MGP_SPRETEiJ_G0017917	Arl5c	93	87.349	ENSEASG00005001922	ARL5C	77	87.349	Equus_asinus_asinus
MGP_SPRETEiJ_G0017917	Arl5c	100	88.268	ENSECAG00000009024	ARL5C	100	88.268	Equus_caballus
MGP_SPRETEiJ_G0017917	Arl5c	100	88.268	ENSFCAG00000009962	ARL5C	100	88.268	Felis_catus
MGP_SPRETEiJ_G0017917	Arl5c	100	92.179	ENSSTOG00000011104	ARL5C	100	92.179	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0017917	Arl5c	100	78.212	ENSLACG00000015332	ARL5C	100	78.212	Latimeria_chalumnae
MGP_SPRETEiJ_G0017917	Arl5c	100	90.503	ENSLAFG00000018248	ARL5C	99	90.503	Loxodonta_africana
MGP_SPRETEiJ_G0017917	Arl5c	99	83.708	ENSMAUG00000012845	Arl5c	88	83.708	Mesocricetus_auratus
MGP_SPRETEiJ_G0017917	Arl5c	100	88.827	ENSMICG00000002661	ARL5C	100	88.827	Microcebus_murinus
MGP_SPRETEiJ_G0017917	Arl5c	100	84.358	ENSMOCG00000000234	Arl5c	100	84.358	Microtus_ochrogaster
MGP_SPRETEiJ_G0017917	Arl5c	100	98.324	MGP_CAROLIEiJ_G0017071	Arl5c	100	98.324	Mus_caroli
MGP_SPRETEiJ_G0017917	Arl5c	100	98.883	ENSMUSG00000038352	Arl5c	100	98.883	Mus_musculus
MGP_SPRETEiJ_G0017917	Arl5c	100	96.648	MGP_PahariEiJ_G0018200	Arl5c	100	96.648	Mus_pahari
MGP_SPRETEiJ_G0017917	Arl5c	100	88.268	ENSMLUG00000030149	ARL5C	99	88.268	Myotis_lucifugus
MGP_SPRETEiJ_G0017917	Arl5c	100	86.034	ENSOGAG00000005894	ARL5C	100	86.034	Otolemur_garnettii
MGP_SPRETEiJ_G0017917	Arl5c	100	88.827	ENSOARG00000010377	ARL5C	99	88.827	Ovis_aries
MGP_SPRETEiJ_G0017917	Arl5c	100	88.268	ENSPPRG00000000975	ARL5C	100	88.268	Panthera_pardus
MGP_SPRETEiJ_G0017917	Arl5c	100	87.709	ENSPTIG00000017487	ARL5C	100	87.709	Panthera_tigris_altaica
MGP_SPRETEiJ_G0017917	Arl5c	99	94.915	ENSPEMG00000008932	Arl5c	99	94.915	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0017917	Arl5c	100	89.944	ENSPCOG00000028489	ARL5C	100	89.944	Propithecus_coquereli
MGP_SPRETEiJ_G0017917	Arl5c	94	88.690	ENSPVAG00000008495	ARL5C	99	88.690	Pteropus_vampyrus
MGP_SPRETEiJ_G0017917	Arl5c	100	93.855	ENSRNOG00000036880	Arl5c	100	93.855	Rattus_norvegicus
MGP_SPRETEiJ_G0017917	Arl5c	98	76.705	ENSSBOG00000021022	ARL5C	100	76.705	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0017917	Arl5c	96	79.532	ENSSPUG00000007555	ARL5C	100	81.595	Sphenodon_punctatus
MGP_SPRETEiJ_G0017917	Arl5c	100	87.709	ENSTBEG00000007274	ARL5C	100	87.709	Tupaia_belangeri
MGP_SPRETEiJ_G0017917	Arl5c	100	87.151	ENSUAMG00000012299	ARL5C	100	87.151	Ursus_americanus
MGP_SPRETEiJ_G0017917	Arl5c	100	87.709	ENSUMAG00000017197	ARL5C	100	87.709	Ursus_maritimus
MGP_SPRETEiJ_G0017917	Arl5c	100	75.978	ENSXETG00000023713	arl5c	92	75.978	Xenopus_tropicalis