EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0017943 (Gene tree)
Gene ID: -
Gene Symbol: Casc3
Alias: Btz|Mln51
Full Name: cancer susceptibility candidate 3
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 32188 bases
Position: chr11:100264820-100297007
Accession: 2179723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0031135	Btz	PF09405.10	2e-23	1	1
MGP_SPRETEiJ_P0031136	Btz	PF09405.10	2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0031135	-	3940	-	MGP_SPRETEiJ_P0031135	698 (aa)	-	-
MGP_SPRETEiJ_T0031137	-	368	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0031136	-	3718	-	MGP_SPRETEiJ_P0031136	698 (aa)	-	-
MGP_SPRETEiJ_T0031138	-	605	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0017943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0017943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0017943	Casc3	100	89.189	ENSG00000108349	CASC3	100	90.185	Homo_sapiens
MGP_SPRETEiJ_G0017943	Casc3	100	90.612	ENSAMEG00000007764	CASC3	100	91.038	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0017943	Casc3	78	51.878	ENSACIG00000000720	casc3	83	51.852	Amphilophus_citrinellus
MGP_SPRETEiJ_G0017943	Casc3	75	54.369	ENSAOCG00000016676	casc3	61	62.147	Amphiprion_ocellaris
MGP_SPRETEiJ_G0017943	Casc3	75	54.369	ENSAPEG00000006787	casc3	61	62.147	Amphiprion_percula
MGP_SPRETEiJ_G0017943	Casc3	74	56.369	ENSATEG00000017196	casc3	70	54.762	Anabas_testudineus
MGP_SPRETEiJ_G0017943	Casc3	91	70.370	ENSACAG00000002674	CASC3	86	71.632	Anolis_carolinensis
MGP_SPRETEiJ_G0017943	Casc3	99	79.161	ENSANAG00000034820	-	99	78.684	Aotus_nancymaae
MGP_SPRETEiJ_G0017943	Casc3	65	95.238	ENSANAG00000031954	-	100	95.238	Aotus_nancymaae
MGP_SPRETEiJ_G0017943	Casc3	100	90.185	ENSBTAG00000006250	CASC3	100	90.185	Bos_taurus
MGP_SPRETEiJ_G0017943	Casc3	100	88.193	ENSCJAG00000016032	CASC3	100	88.620	Callithrix_jacchus
MGP_SPRETEiJ_G0017943	Casc3	100	90.043	ENSCAFG00000016141	CASC3	100	91.038	Canis_familiaris
MGP_SPRETEiJ_G0017943	Casc3	100	89.205	ENSCAFG00020018882	CASC3	100	91.419	Canis_lupus_dingo
MGP_SPRETEiJ_G0017943	Casc3	100	89.189	ENSCHIG00000006338	CASC3	100	89.189	Capra_hircus
MGP_SPRETEiJ_G0017943	Casc3	100	81.935	ENSTSYG00000002975	CASC3	89	91.653	Carlito_syrichta
MGP_SPRETEiJ_G0017943	Casc3	88	85.227	ENSCAPG00000010514	CASC3	100	87.013	Cavia_aperea
MGP_SPRETEiJ_G0017943	Casc3	100	84.615	ENSCPOG00000015139	CASC3	100	86.040	Cavia_porcellus
MGP_SPRETEiJ_G0017943	Casc3	100	86.506	ENSCCAG00000033620	CASC3	100	89.773	Cebus_capucinus
MGP_SPRETEiJ_G0017943	Casc3	100	90.199	ENSCATG00000033593	CASC3	100	90.767	Cercocebus_atys
MGP_SPRETEiJ_G0017943	Casc3	100	86.895	ENSCLAG00000013730	CASC3	100	87.607	Chinchilla_lanigera
MGP_SPRETEiJ_G0017943	Casc3	100	90.199	ENSCSAG00000002777	CASC3	100	90.767	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0017943	Casc3	99	71.328	ENSCPBG00000004750	CASC3	99	72.650	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0017943	Casc3	100	90.057	ENSCANG00000008814	CASC3	100	90.625	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0017943	Casc3	100	94.009	ENSCGRG00001014706	Casc3	100	94.294	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0017943	Casc3	100	86.591	ENSCGRG00000001952	Casc3	96	94.051	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0017943	Casc3	82	52.848	ENSCSEG00000010047	casc3	77	52.050	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0017943	Casc3	85	58.154	ENSDARG00000029911	casc3	72	59.414	Danio_rerio
MGP_SPRETEiJ_G0017943	Casc3	100	89.616	ENSDNOG00000017249	CASC3	96	90.043	Dasypus_novemcinctus
MGP_SPRETEiJ_G0017943	Casc3	100	82.504	ENSETEG00000013720	CASC3	100	82.646	Echinops_telfairi
MGP_SPRETEiJ_G0017943	Casc3	88	37.298	ENSEBUG00000010654	casc3	88	36.254	Eptatretus_burgeri
MGP_SPRETEiJ_G0017943	Casc3	100	89.220	ENSEASG00005002909	CASC3	100	91.830	Equus_asinus_asinus
MGP_SPRETEiJ_G0017943	Casc3	100	90.327	ENSECAG00000019947	CASC3	88	90.754	Equus_caballus
MGP_SPRETEiJ_G0017943	Casc3	73	83.594	ENSEEUG00000014253	CASC3	100	84.375	Erinaceus_europaeus
MGP_SPRETEiJ_G0017943	Casc3	100	91.038	ENSFCAG00000014998	CASC3	100	91.465	Felis_catus
MGP_SPRETEiJ_G0017943	Casc3	88	71.003	ENSFALG00000000412	CASC3	98	71.496	Ficedula_albicollis
MGP_SPRETEiJ_G0017943	Casc3	93	83.714	ENSFDAG00000020696	CASC3	100	84.018	Fukomys_damarensis
MGP_SPRETEiJ_G0017943	Casc3	74	55.507	ENSFHEG00000015793	casc3	72	56.000	Fundulus_heteroclitus
MGP_SPRETEiJ_G0017943	Casc3	90	74.209	ENSGALG00000031813	CASC3	99	69.385	Gallus_gallus
MGP_SPRETEiJ_G0017943	Casc3	73	52.419	ENSGAFG00000017148	casc3	54	61.850	Gambusia_affinis
MGP_SPRETEiJ_G0017943	Casc3	89	73.768	ENSGAGG00000008432	CASC3	94	75.845	Gopherus_agassizii
MGP_SPRETEiJ_G0017943	Casc3	100	89.189	ENSGGOG00000005067	CASC3	100	90.043	Gorilla_gorilla
MGP_SPRETEiJ_G0017943	Casc3	100	87.198	ENSHGLG00000012117	CASC3	100	87.482	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0017943	Casc3	89	86.901	ENSHGLG00100002268	CASC3	99	87.319	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0017943	Casc3	100	90.185	ENSSTOG00000006374	CASC3	100	90.754	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0017943	Casc3	100	87.358	ENSJJAG00000023525	Casc3	100	89.347	Jaculus_jaculus
MGP_SPRETEiJ_G0017943	Casc3	66	63.866	ENSKMAG00000019507	casc3	81	49.648	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0017943	Casc3	83	47.980	ENSLBEG00000005435	casc3	66	61.236	Labrus_bergylta
MGP_SPRETEiJ_G0017943	Casc3	87	59.019	ENSLACG00000013200	CASC3	89	58.679	Latimeria_chalumnae
MGP_SPRETEiJ_G0017943	Casc3	69	73.913	ENSLOCG00000013518	casc3	65	71.014	Lepisosteus_oculatus
MGP_SPRETEiJ_G0017943	Casc3	100	88.336	ENSLAFG00000000606	CASC3	100	89.189	Loxodonta_africana
MGP_SPRETEiJ_G0017943	Casc3	100	90.199	ENSMFAG00000041496	CASC3	100	90.767	Macaca_fascicularis
MGP_SPRETEiJ_G0017943	Casc3	100	90.199	ENSMMUG00000045187	CASC3	100	90.767	Macaca_mulatta
MGP_SPRETEiJ_G0017943	Casc3	89	90.112	ENSMLEG00000029049	CASC3	98	90.705	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0017943	Casc3	75	54.510	ENSMAMG00000005235	casc3	74	56.838	Mastacembelus_armatus
MGP_SPRETEiJ_G0017943	Casc3	86	72.817	ENSMGAG00000013247	CASC3	99	71.498	Meleagris_gallopavo
MGP_SPRETEiJ_G0017943	Casc3	71	93.800	ENSMAUG00000006023	Casc3	80	93.426	Mesocricetus_auratus
MGP_SPRETEiJ_G0017943	Casc3	100	88.620	ENSMICG00000003321	CASC3	100	90.327	Microcebus_murinus
MGP_SPRETEiJ_G0017943	Casc3	100	94.009	ENSMOCG00000013644	Casc3	100	93.295	Microtus_ochrogaster
MGP_SPRETEiJ_G0017943	Casc3	100	76.638	ENSMODG00000013044	CASC3	92	78.632	Monodelphis_domestica
MGP_SPRETEiJ_G0017943	Casc3	78	47.849	ENSMALG00000019771	casc3	83	49.458	Monopterus_albus
MGP_SPRETEiJ_G0017943	Casc3	100	98.997	MGP_CAROLIEiJ_G0017099	Casc3	100	98.997	Mus_caroli
MGP_SPRETEiJ_G0017943	Casc3	100	99.427	ENSMUSG00000078676	Casc3	100	99.427	Mus_musculus
MGP_SPRETEiJ_G0017943	Casc3	100	89.900	ENSMPUG00000014903	CASC3	100	90.327	Mustela_putorius_furo
MGP_SPRETEiJ_G0017943	Casc3	100	86.364	ENSMLUG00000010520	CASC3	100	89.347	Myotis_lucifugus
MGP_SPRETEiJ_G0017943	Casc3	100	90.571	ENSNGAG00000023121	Casc3	100	91.571	Nannospalax_galili
MGP_SPRETEiJ_G0017943	Casc3	100	89.047	ENSNLEG00000001598	CASC3	100	89.900	Nomascus_leucogenys
MGP_SPRETEiJ_G0017943	Casc3	60	70.755	ENSMEUG00000015662	CASC3	100	71.975	Notamacropus_eugenii
MGP_SPRETEiJ_G0017943	Casc3	73	84.086	ENSOPRG00000007240	-	75	85.686	Ochotona_princeps
MGP_SPRETEiJ_G0017943	Casc3	100	85.694	ENSODEG00000017858	CASC3	100	87.394	Octodon_degus
MGP_SPRETEiJ_G0017943	Casc3	79	52.439	ENSOANG00000003499	-	95	53.240	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0017943	Casc3	100	90.741	ENSOCUG00000002954	CASC3	100	90.883	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0017943	Casc3	99	89.270	ENSOGAG00000034486	CASC3	98	90.272	Otolemur_garnettii
MGP_SPRETEiJ_G0017943	Casc3	100	90.469	ENSOARG00000013239	CASC3	100	90.469	Ovis_aries
MGP_SPRETEiJ_G0017943	Casc3	100	89.189	ENSPPAG00000035069	CASC3	100	90.185	Pan_paniscus
MGP_SPRETEiJ_G0017943	Casc3	100	90.896	ENSPPRG00000023670	CASC3	100	91.323	Panthera_pardus
MGP_SPRETEiJ_G0017943	Casc3	91	90.424	ENSPTIG00000010891	CASC3	91	90.895	Panthera_tigris_altaica
MGP_SPRETEiJ_G0017943	Casc3	100	89.915	ENSPANG00000021708	CASC3	100	90.483	Papio_anubis
MGP_SPRETEiJ_G0017943	Casc3	99	47.727	ENSPKIG00000023186	casc3	98	46.582	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0017943	Casc3	100	94.857	ENSPEMG00000009774	Casc3	100	94.857	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0017943	Casc3	100	79.659	ENSPCIG00000025678	CASC3	100	80.939	Phascolarctos_cinereus
MGP_SPRETEiJ_G0017943	Casc3	89	49.687	ENSPFOG00000017632	casc3	92	49.452	Poecilia_formosa
MGP_SPRETEiJ_G0017943	Casc3	86	53.755	ENSPLAG00000005268	casc3	80	53.876	Poecilia_latipinna
MGP_SPRETEiJ_G0017943	Casc3	68	47.571	ENSPMEG00000010299	casc3	73	49.446	Poecilia_mexicana
MGP_SPRETEiJ_G0017943	Casc3	65	66.429	ENSPREG00000011856	casc3	82	51.526	Poecilia_reticulata
MGP_SPRETEiJ_G0017943	Casc3	100	88.905	ENSPPYG00000008467	CASC3	100	90.327	Pongo_abelii
MGP_SPRETEiJ_G0017943	Casc3	100	86.486	ENSPCOG00000008183	CASC3	100	88.762	Propithecus_coquereli
MGP_SPRETEiJ_G0017943	Casc3	100	87.767	ENSPVAG00000008556	CASC3	100	90.043	Pteropus_vampyrus
MGP_SPRETEiJ_G0017943	Casc3	91	98.328	ENSRNOG00000009716	Casc3	100	98.328	Rattus_norvegicus
MGP_SPRETEiJ_G0017943	Casc3	100	90.341	ENSRBIG00000033289	CASC3	100	89.773	Rhinopithecus_bieti
MGP_SPRETEiJ_G0017943	Casc3	100	90.341	ENSRROG00000022337	CASC3	100	90.909	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0017943	Casc3	88	87.864	ENSSBOG00000031406	CASC3	98	89.806	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0017943	Casc3	89	82.775	ENSSHAG00000013338	CASC3	99	82.692	Sarcophilus_harrisii
MGP_SPRETEiJ_G0017943	Casc3	66	68.750	ENSSMAG00000016096	casc3	64	65.806	Scophthalmus_maximus
MGP_SPRETEiJ_G0017943	Casc3	85	77.946	ENSSARG00000010378	CASC3	98	77.946	Sorex_araneus
MGP_SPRETEiJ_G0017943	Casc3	89	89.297	ENSSSCG00000017477	CASC3	98	89.888	Sus_scrofa
MGP_SPRETEiJ_G0017943	Casc3	74	72.000	ENSTGUG00000002300	CASC3	99	72.000	Taeniopygia_guttata
MGP_SPRETEiJ_G0017943	Casc3	72	57.080	ENSTRUG00000000673	casc3	76	52.997	Takifugu_rubripes
MGP_SPRETEiJ_G0017943	Casc3	66	91.981	ENSTBEG00000017459	CASC3	67	91.981	Tupaia_belangeri
MGP_SPRETEiJ_G0017943	Casc3	86	79.402	ENSTTRG00000016896	CASC3	98	79.966	Tursiops_truncatus
MGP_SPRETEiJ_G0017943	Casc3	100	89.631	ENSUAMG00000015116	CASC3	100	91.475	Ursus_americanus
MGP_SPRETEiJ_G0017943	Casc3	89	89.617	ENSUMAG00000017697	CASC3	100	92.784	Ursus_maritimus
MGP_SPRETEiJ_G0017943	Casc3	76	95.798	ENSVPAG00000000799	CASC3	75	95.798	Vicugna_pacos
MGP_SPRETEiJ_G0017943	Casc3	100	90.043	ENSVVUG00000000997	CASC3	100	91.038	Vulpes_vulpes
MGP_SPRETEiJ_G0017943	Casc3	89	60.883	ENSXETG00000024395	casc3	89	61.280	Xenopus_tropicalis
MGP_SPRETEiJ_G0017943	Casc3	68	66.038	ENSXMAG00000013937	casc3	61	62.857	Xiphophorus_maculatus