EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0018058 (Gene tree)
Gene ID: -
Gene Symbol: Gm27029
Alias: -
Full Name: predicted gene%2C 27029
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 22633 bases
Position: chr11:103040844-103063476
Accession: 5504144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0031482	tRNA_SAD	PF07973.14	3.9e-09	1	1
MGP_SPRETEiJ_P0031480	tRNA_SAD	PF07973.14	4.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0031480	-	1912	-	MGP_SPRETEiJ_P0031480	525 (aa)	-	-
MGP_SPRETEiJ_T0031482	-	1869	-	MGP_SPRETEiJ_P0031482	543 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0018058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0018058's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0018058	Gm27029	76	99.750	MGP_SPRETEiJ_G0018059	Aarsd1	97	99.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0018058	Gm27029	100	90.286	ENSG00000108825	PTGES3L-AARSD1	100	93.939	Homo_sapiens
MGP_SPRETEiJ_G0018058	Gm27029	76	89.000	ENSG00000266967	AARSD1	100	90.000	Homo_sapiens
MGP_SPRETEiJ_G0018058	Gm27029	76	66.000	ENSAPOG00000006776	aarsd1	97	66.000	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0018058	Gm27029	100	90.476	ENSAMEG00000000205	-	93	90.556	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0018058	Gm27029	76	66.000	ENSACIG00000001519	aarsd1	97	66.000	Amphilophus_citrinellus
MGP_SPRETEiJ_G0018058	Gm27029	76	61.750	ENSAOCG00000014735	aarsd1	97	60.750	Amphiprion_ocellaris
MGP_SPRETEiJ_G0018058	Gm27029	76	65.500	ENSAPEG00000004670	aarsd1	97	65.500	Amphiprion_percula
MGP_SPRETEiJ_G0018058	Gm27029	76	61.845	ENSATEG00000014178	aarsd1	97	61.097	Anabas_testudineus
MGP_SPRETEiJ_G0018058	Gm27029	68	75.775	ENSAPLG00000004132	-	97	75.775	Anas_platyrhynchos
MGP_SPRETEiJ_G0018058	Gm27029	99	73.704	ENSACAG00000013559	-	99	73.704	Anolis_carolinensis
MGP_SPRETEiJ_G0018058	Gm27029	76	89.250	ENSANAG00000022313	-	97	89.250	Aotus_nancymaae
MGP_SPRETEiJ_G0018058	Gm27029	76	87.500	ENSANAG00000028981	-	98	87.500	Aotus_nancymaae
MGP_SPRETEiJ_G0018058	Gm27029	76	65.000	ENSACLG00000013655	aarsd1	97	58.105	Astatotilapia_calliptera
MGP_SPRETEiJ_G0018058	Gm27029	76	64.662	ENSAMXG00000031615	aarsd1	97	64.662	Astyanax_mexicanus
MGP_SPRETEiJ_G0018058	Gm27029	76	83.796	ENSBTAG00000015136	AARSD1	97	83.796	Bos_taurus
MGP_SPRETEiJ_G0018058	Gm27029	76	88.972	ENSCJAG00000013086	-	97	88.972	Callithrix_jacchus
MGP_SPRETEiJ_G0018058	Gm27029	100	92.381	ENSCAFG00000014638	-	93	92.265	Canis_familiaris
MGP_SPRETEiJ_G0018058	Gm27029	76	91.250	ENSCAFG00020013016	-	80	91.250	Canis_lupus_dingo
MGP_SPRETEiJ_G0018058	Gm27029	76	91.000	ENSCHIG00000006766	-	97	91.000	Capra_hircus
MGP_SPRETEiJ_G0018058	Gm27029	59	85.256	ENSTSYG00000034407	-	91	85.256	Carlito_syrichta
MGP_SPRETEiJ_G0018058	Gm27029	95	78.443	ENSCAPG00000014195	-	99	78.443	Cavia_aperea
MGP_SPRETEiJ_G0018058	Gm27029	76	80.702	ENSCPOG00000030193	-	97	80.702	Cavia_porcellus
MGP_SPRETEiJ_G0018058	Gm27029	76	89.000	ENSCCAG00000033455	-	97	89.000	Cebus_capucinus
MGP_SPRETEiJ_G0018058	Gm27029	100	90.095	ENSCATG00000023451	-	97	88.250	Cercocebus_atys
MGP_SPRETEiJ_G0018058	Gm27029	68	80.112	ENSCLAG00000016486	-	86	80.112	Chinchilla_lanigera
MGP_SPRETEiJ_G0018058	Gm27029	76	89.250	ENSCSAG00000003373	-	97	89.250	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0018058	Gm27029	100	81.333	ENSCHOG00000004531	-	100	81.333	Choloepus_hoffmanni
MGP_SPRETEiJ_G0018058	Gm27029	76	74.937	ENSCPBG00000016295	-	83	74.937	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0018058	Gm27029	74	51.786	ENSCING00000008962	-	97	51.786	Ciona_intestinalis
MGP_SPRETEiJ_G0018058	Gm27029	75	51.269	ENSCSAVG00000000488	-	96	51.269	Ciona_savignyi
MGP_SPRETEiJ_G0018058	Gm27029	100	85.333	ENSCANG00000041605	-	97	89.500	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0018058	Gm27029	76	96.250	ENSCGRG00001022384	-	97	96.250	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0018058	Gm27029	76	96.250	ENSCGRG00000015974	-	97	96.250	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0018058	Gm27029	76	64.750	ENSCSEG00000000523	aarsd1	97	64.750	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0018058	Gm27029	76	66.165	ENSCVAG00000018616	aarsd1	97	66.165	Cyprinodon_variegatus
MGP_SPRETEiJ_G0018058	Gm27029	76	63.250	ENSDARG00000015747	aarsd1	97	63.250	Danio_rerio
MGP_SPRETEiJ_G0018058	Gm27029	76	90.500	ENSDNOG00000040976	-	92	90.500	Dasypus_novemcinctus
MGP_SPRETEiJ_G0018058	Gm27029	100	91.048	ENSDORG00000016028	-	100	90.608	Dipodomys_ordii
MGP_SPRETEiJ_G0018058	Gm27029	74	44.335	FBgn0029664	CG10802	92	44.335	Drosophila_melanogaster
MGP_SPRETEiJ_G0018058	Gm27029	99	73.473	ENSETEG00000016031	-	100	73.473	Echinops_telfairi
MGP_SPRETEiJ_G0018058	Gm27029	70	58.311	ENSEBUG00000010336	aarsd1	98	58.311	Eptatretus_burgeri
MGP_SPRETEiJ_G0018058	Gm27029	76	91.000	ENSEASG00005010061	-	97	91.000	Equus_asinus_asinus
MGP_SPRETEiJ_G0018058	Gm27029	74	90.000	ENSECAG00000009275	-	88	89.944	Equus_caballus
MGP_SPRETEiJ_G0018058	Gm27029	100	86.476	ENSEEUG00000008897	-	100	86.476	Erinaceus_europaeus
MGP_SPRETEiJ_G0018058	Gm27029	75	66.162	ENSELUG00000007588	aarsd1	97	66.162	Esox_lucius
MGP_SPRETEiJ_G0018058	Gm27029	99	94.262	ENSFCAG00000038399	-	78	93.750	Felis_catus
MGP_SPRETEiJ_G0018058	Gm27029	99	69.188	ENSFALG00000000757	-	99	69.188	Ficedula_albicollis
MGP_SPRETEiJ_G0018058	Gm27029	75	64.899	ENSFHEG00000019252	aarsd1	97	64.899	Fundulus_heteroclitus
MGP_SPRETEiJ_G0018058	Gm27029	98	57.143	ENSGMOG00000013229	aarsd1	98	57.143	Gadus_morhua
MGP_SPRETEiJ_G0018058	Gm27029	76	72.613	ENSGALG00000002880	AARSD1	97	72.613	Gallus_gallus
MGP_SPRETEiJ_G0018058	Gm27029	76	62.189	ENSGAFG00000011085	aarsd1	97	62.000	Gambusia_affinis
MGP_SPRETEiJ_G0018058	Gm27029	98	61.434	ENSGACG00000009815	aarsd1	95	68.718	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0018058	Gm27029	76	75.188	ENSGAGG00000008103	-	97	75.188	Gopherus_agassizii
MGP_SPRETEiJ_G0018058	Gm27029	100	84.762	ENSGGOG00000006250	PTGES3L-AARSD1	97	89.250	Gorilla_gorilla
MGP_SPRETEiJ_G0018058	Gm27029	76	65.250	ENSHBUG00000022391	aarsd1	97	65.250	Haplochromis_burtoni
MGP_SPRETEiJ_G0018058	Gm27029	75	80.556	ENSHGLG00000010802	-	94	80.556	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0018058	Gm27029	66	82.370	ENSHGLG00100000638	-	96	82.370	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0018058	Gm27029	76	65.750	ENSHCOG00000013491	aarsd1	97	65.750	Hippocampus_comes
MGP_SPRETEiJ_G0018058	Gm27029	76	64.250	ENSIPUG00000010672	aarsd1	97	64.250	Ictalurus_punctatus
MGP_SPRETEiJ_G0018058	Gm27029	74	73.077	ENSSTOG00000029510	-	94	73.077	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0018058	Gm27029	76	91.250	ENSSTOG00000000481	-	97	91.250	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0018058	Gm27029	76	90.750	ENSJJAG00000011149	-	97	90.750	Jaculus_jaculus
MGP_SPRETEiJ_G0018058	Gm27029	76	65.250	ENSKMAG00000009612	aarsd1	97	65.250	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0018058	Gm27029	76	66.250	ENSLBEG00000008445	aarsd1	97	66.250	Labrus_bergylta
MGP_SPRETEiJ_G0018058	Gm27029	100	68.190	ENSLACG00000006926	aarsd1	99	68.392	Latimeria_chalumnae
MGP_SPRETEiJ_G0018058	Gm27029	100	64.773	ENSLOCG00000012212	aarsd1	97	68.750	Lepisosteus_oculatus
MGP_SPRETEiJ_G0018058	Gm27029	100	90.095	ENSLAFG00000003022	-	100	89.871	Loxodonta_africana
MGP_SPRETEiJ_G0018058	Gm27029	100	90.286	ENSMFAG00000034389	-	97	88.500	Macaca_fascicularis
MGP_SPRETEiJ_G0018058	Gm27029	100	90.286	ENSMMUG00000014123	-	97	88.500	Macaca_mulatta
MGP_SPRETEiJ_G0018058	Gm27029	100	89.524	ENSMNEG00000037015	-	97	87.750	Macaca_nemestrina
MGP_SPRETEiJ_G0018058	Gm27029	100	90.286	ENSMLEG00000038627	-	97	88.500	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0018058	Gm27029	76	65.750	ENSMAMG00000007918	aarsd1	97	65.750	Mastacembelus_armatus
MGP_SPRETEiJ_G0018058	Gm27029	76	64.020	ENSMZEG00005009412	aarsd1	97	64.020	Maylandia_zebra
MGP_SPRETEiJ_G0018058	Gm27029	99	64.630	ENSMGAG00000004245	-	99	64.630	Meleagris_gallopavo
MGP_SPRETEiJ_G0018058	Gm27029	76	95.750	ENSMAUG00000022119	-	97	95.750	Mesocricetus_auratus
MGP_SPRETEiJ_G0018058	Gm27029	76	79.250	ENSMICG00000014185	-	97	79.250	Microcebus_murinus
MGP_SPRETEiJ_G0018058	Gm27029	100	93.002	ENSMOCG00000008732	-	100	93.002	Microtus_ochrogaster
MGP_SPRETEiJ_G0018058	Gm27029	75	63.520	ENSMMOG00000002681	aarsd1	95	63.520	Mola_mola
MGP_SPRETEiJ_G0018058	Gm27029	99	90.984	ENSMODG00000015109	-	80	90.972	Monodelphis_domestica
MGP_SPRETEiJ_G0018058	Gm27029	76	64.250	ENSMALG00000004123	aarsd1	97	64.250	Monopterus_albus
MGP_SPRETEiJ_G0018058	Gm27029	100	98.527	MGP_CAROLIEiJ_G0017215	Gm27029	100	98.527	Mus_caroli
MGP_SPRETEiJ_G0018058	Gm27029	76	98.000	MGP_CAROLIEiJ_G0017216	Aarsd1	97	98.000	Mus_caroli
MGP_SPRETEiJ_G0018058	Gm27029	100	99.079	ENSMUSG00000097239	Gm27029	100	99.079	Mus_musculus
MGP_SPRETEiJ_G0018058	Gm27029	76	98.750	ENSMUSG00000075528	Aarsd1	97	98.750	Mus_musculus
MGP_SPRETEiJ_G0018058	Gm27029	100	96.571	MGP_PahariEiJ_G0018345	-	100	96.571	Mus_pahari
MGP_SPRETEiJ_G0018058	Gm27029	76	96.000	MGP_PahariEiJ_G0018346	-	97	96.000	Mus_pahari
MGP_SPRETEiJ_G0018058	Gm27029	76	90.750	ENSMPUG00000009956	-	89	90.750	Mustela_putorius_furo
MGP_SPRETEiJ_G0018058	Gm27029	76	86.717	ENSMLUG00000024369	-	97	86.717	Myotis_lucifugus
MGP_SPRETEiJ_G0018058	Gm27029	76	91.750	ENSNGAG00000010786	-	97	91.750	Nannospalax_galili
MGP_SPRETEiJ_G0018058	Gm27029	76	61.500	ENSNBRG00000021624	aarsd1	97	61.500	Neolamprologus_brichardi
MGP_SPRETEiJ_G0018058	Gm27029	100	83.619	ENSNLEG00000011890	-	97	88.750	Nomascus_leucogenys
MGP_SPRETEiJ_G0018058	Gm27029	100	71.048	ENSMEUG00000010450	-	100	71.048	Notamacropus_eugenii
MGP_SPRETEiJ_G0018058	Gm27029	100	85.143	ENSOPRG00000012708	-	100	85.143	Ochotona_princeps
MGP_SPRETEiJ_G0018058	Gm27029	99	83.579	ENSODEG00000018082	-	99	83.579	Octodon_degus
MGP_SPRETEiJ_G0018058	Gm27029	100	58.144	ENSONIG00000019893	aarsd1	97	64.250	Oreochromis_niloticus
MGP_SPRETEiJ_G0018058	Gm27029	54	57.053	ENSOANG00000013149	-	72	71.053	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0018058	Gm27029	76	89.500	ENSOCUG00000009259	-	97	89.500	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0018058	Gm27029	74	66.923	ENSORLG00000022752	aarsd1	94	66.923	Oryzias_latipes
MGP_SPRETEiJ_G0018058	Gm27029	76	64.500	ENSORLG00020021477	aarsd1	97	64.500	Oryzias_latipes_hni
MGP_SPRETEiJ_G0018058	Gm27029	76	64.500	ENSORLG00015019664	aarsd1	94	65.897	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0018058	Gm27029	61	65.625	ENSOMEG00000000122	aarsd1	85	65.625	Oryzias_melastigma
MGP_SPRETEiJ_G0018058	Gm27029	76	92.500	ENSOGAG00000003934	-	97	92.500	Otolemur_garnettii
MGP_SPRETEiJ_G0018058	Gm27029	100	91.619	ENSOARG00000004172	-	97	91.000	Ovis_aries
MGP_SPRETEiJ_G0018058	Gm27029	100	90.476	ENSPPAG00000032539	-	97	89.250	Pan_paniscus
MGP_SPRETEiJ_G0018058	Gm27029	76	91.500	ENSPPRG00000013962	-	97	91.500	Panthera_pardus
MGP_SPRETEiJ_G0018058	Gm27029	78	89.976	ENSPTIG00000012989	-	78	89.976	Panthera_tigris_altaica
MGP_SPRETEiJ_G0018058	Gm27029	100	90.667	ENSPTRG00000009230	-	97	89.500	Pan_troglodytes
MGP_SPRETEiJ_G0018058	Gm27029	100	90.476	ENSPANG00000021379	-	97	88.750	Papio_anubis
MGP_SPRETEiJ_G0018058	Gm27029	76	67.250	ENSPKIG00000001834	aarsd1	97	67.250	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0018058	Gm27029	54	74.377	ENSPSIG00000004931	-	100	74.377	Pelodiscus_sinensis
MGP_SPRETEiJ_G0018058	Gm27029	100	96.571	ENSPEMG00000018495	-	100	96.317	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0018058	Gm27029	76	63.000	ENSPMAG00000002529	aarsd1	97	63.000	Petromyzon_marinus
MGP_SPRETEiJ_G0018058	Gm27029	76	79.353	ENSPCIG00000021490	-	97	79.353	Phascolarctos_cinereus
MGP_SPRETEiJ_G0018058	Gm27029	100	58.144	ENSPFOG00000014083	aarsd1	97	64.750	Poecilia_formosa
MGP_SPRETEiJ_G0018058	Gm27029	76	64.750	ENSPLAG00000023398	aarsd1	97	64.750	Poecilia_latipinna
MGP_SPRETEiJ_G0018058	Gm27029	76	62.594	ENSPMEG00000005191	aarsd1	97	62.594	Poecilia_mexicana
MGP_SPRETEiJ_G0018058	Gm27029	76	64.500	ENSPREG00000004827	aarsd1	97	64.500	Poecilia_reticulata
MGP_SPRETEiJ_G0018058	Gm27029	51	89.888	ENSPPYG00000029909	-	100	89.888	Pongo_abelii
MGP_SPRETEiJ_G0018058	Gm27029	91	87.917	ENSPCAG00000013129	-	100	87.917	Procavia_capensis
MGP_SPRETEiJ_G0018058	Gm27029	76	92.500	ENSPCOG00000014853	-	97	92.500	Propithecus_coquereli
MGP_SPRETEiJ_G0018058	Gm27029	100	88.190	ENSPVAG00000008812	-	100	88.190	Pteropus_vampyrus
MGP_SPRETEiJ_G0018058	Gm27029	76	64.020	ENSPNYG00000019048	aarsd1	97	64.020	Pundamilia_nyererei
MGP_SPRETEiJ_G0018058	Gm27029	76	64.500	ENSPNAG00000000407	aarsd1	97	64.500	Pygocentrus_nattereri
MGP_SPRETEiJ_G0018058	Gm27029	76	95.250	ENSRNOG00000020658	Aarsd1	97	95.250	Rattus_norvegicus
MGP_SPRETEiJ_G0018058	Gm27029	76	90.000	ENSRBIG00000040598	-	93	90.000	Rhinopithecus_bieti
MGP_SPRETEiJ_G0018058	Gm27029	100	90.476	ENSRROG00000030505	-	97	89.000	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0018058	Gm27029	68	89.045	ENSSBOG00000025962	-	97	89.045	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0018058	Gm27029	100	82.967	ENSSHAG00000012128	-	100	82.967	Sarcophilus_harrisii
MGP_SPRETEiJ_G0018058	Gm27029	75	67.857	ENSSFOG00015008880	aarsd1	96	67.857	Scleropages_formosus
MGP_SPRETEiJ_G0018058	Gm27029	74	65.897	ENSSMAG00000011081	aarsd1	94	65.897	Scophthalmus_maximus
MGP_SPRETEiJ_G0018058	Gm27029	76	66.000	ENSSDUG00000003913	aarsd1	97	66.000	Seriola_dumerili
MGP_SPRETEiJ_G0018058	Gm27029	76	65.750	ENSSLDG00000001645	aarsd1	97	65.750	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0018058	Gm27029	76	72.030	ENSSPUG00000004592	-	97	72.030	Sphenodon_punctatus
MGP_SPRETEiJ_G0018058	Gm27029	76	65.750	ENSSPAG00000018029	aarsd1	97	65.750	Stegastes_partitus
MGP_SPRETEiJ_G0018058	Gm27029	76	90.500	ENSSSCG00000037979	-	97	90.500	Sus_scrofa
MGP_SPRETEiJ_G0018058	Gm27029	75	72.980	ENSTGUG00000002837	-	99	72.980	Taeniopygia_guttata
MGP_SPRETEiJ_G0018058	Gm27029	76	64.500	ENSTRUG00000016572	aarsd1	97	64.500	Takifugu_rubripes
MGP_SPRETEiJ_G0018058	Gm27029	100	58.034	ENSTNIG00000012859	aarsd1	100	58.034	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0018058	Gm27029	54	79.078	ENSTBEG00000001124	-	100	78.369	Tupaia_belangeri
MGP_SPRETEiJ_G0018058	Gm27029	94	91.075	ENSTTRG00000011737	-	100	91.075	Tursiops_truncatus
MGP_SPRETEiJ_G0018058	Gm27029	76	90.250	ENSUAMG00000013129	-	97	90.250	Ursus_americanus
MGP_SPRETEiJ_G0018058	Gm27029	76	90.000	ENSUMAG00000025067	-	97	90.000	Ursus_maritimus
MGP_SPRETEiJ_G0018058	Gm27029	87	90.780	ENSVPAG00000002571	-	87	90.780	Vicugna_pacos
MGP_SPRETEiJ_G0018058	Gm27029	76	91.000	ENSVVUG00000023939	-	97	91.000	Vulpes_vulpes
MGP_SPRETEiJ_G0018058	Gm27029	75	60.748	ENSXETG00000013644	aarsd1	96	60.606	Xenopus_tropicalis
MGP_SPRETEiJ_G0018058	Gm27029	76	62.344	ENSXCOG00000017893	aarsd1	97	62.250	Xiphophorus_couchianus
MGP_SPRETEiJ_G0018058	Gm27029	76	63.750	ENSXMAG00000016266	aarsd1	97	63.750	Xiphophorus_maculatus