EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0018069 (Gene tree)
Gene ID: -
Gene Symbol: Rdm1
Alias: 2410008M22Rik|Rad52b
Full Name: RAD52 motif 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 9627 bases
Position: chr11:103303891-103313517
Accession: 1913849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0031536	RRM_1	PF00076.22	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0031539	-	463	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0031538	-	963	-	MGP_SPRETEiJ_P0031538	126 (aa)	-	-
MGP_SPRETEiJ_T0031535	-	434	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0031537	-	804	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0031536	-	1124	-	MGP_SPRETEiJ_P0031536	281 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0018069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0018069's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0018069	Rdm1	99	71.731	ENSG00000278023	RDM1	97	81.203	Homo_sapiens
MGP_SPRETEiJ_G0018069	Rdm1	88	32.806	ENSAPEG00000008929	zgc:103564	92	33.068	Amphiprion_percula
MGP_SPRETEiJ_G0018069	Rdm1	86	52.245	ENSAPLG00000004384	RDM1	94	51.837	Anas_platyrhynchos
MGP_SPRETEiJ_G0018069	Rdm1	97	45.714	ENSACAG00000012989	-	100	45.714	Anolis_carolinensis
MGP_SPRETEiJ_G0018069	Rdm1	99	72.085	ENSANAG00000032752	RDM1	96	80.451	Aotus_nancymaae
MGP_SPRETEiJ_G0018069	Rdm1	99	70.775	ENSBTAG00000000030	RDM1	99	70.775	Bos_taurus
MGP_SPRETEiJ_G0018069	Rdm1	89	74.603	ENSCJAG00000015031	RDM1	96	82.707	Callithrix_jacchus
MGP_SPRETEiJ_G0018069	Rdm1	88	66.016	ENSCAFG00000015160	-	99	65.882	Canis_familiaris
MGP_SPRETEiJ_G0018069	Rdm1	99	71.530	ENSCHIG00000020607	RDM1	99	71.530	Capra_hircus
MGP_SPRETEiJ_G0018069	Rdm1	99	66.667	ENSCPOG00000001495	-	98	66.667	Cavia_porcellus
MGP_SPRETEiJ_G0018069	Rdm1	96	72.059	ENSCCAG00000035763	RDM1	96	81.203	Cebus_capucinus
MGP_SPRETEiJ_G0018069	Rdm1	99	73.498	ENSCATG00000044451	RDM1	96	82.707	Cercocebus_atys
MGP_SPRETEiJ_G0018069	Rdm1	93	71.698	ENSCSAG00000006209	RDM1	99	71.698	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0018069	Rdm1	80	51.528	ENSCPBG00000009105	RDM1	97	49.804	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0018069	Rdm1	99	72.085	ENSCANG00000041322	RDM1	95	79.130	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0018069	Rdm1	96	83.643	ENSCGRG00001015927	Rdm1	99	83.214	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0018069	Rdm1	89	32.806	ENSCVAG00000001956	zgc:103564	89	32.927	Cyprinodon_variegatus
MGP_SPRETEiJ_G0018069	Rdm1	87	74.597	ENSDNOG00000045224	-	92	74.597	Dasypus_novemcinctus
MGP_SPRETEiJ_G0018069	Rdm1	70	70.588	ENSEASG00005010554	RDM1	71	70.588	Equus_asinus_asinus
MGP_SPRETEiJ_G0018069	Rdm1	90	71.863	ENSECAG00000022182	RDM1	90	72.727	Equus_caballus
MGP_SPRETEiJ_G0018069	Rdm1	87	70.040	ENSEEUG00000006127	RDM1	98	70.040	Erinaceus_europaeus
MGP_SPRETEiJ_G0018069	Rdm1	80	74.890	ENSFCAG00000043429	RDM1	96	82.707	Felis_catus
MGP_SPRETEiJ_G0018069	Rdm1	97	52.174	ENSGALG00000000243	RDM1	97	52.174	Gallus_gallus
MGP_SPRETEiJ_G0018069	Rdm1	86	52.209	ENSGAGG00000000293	-	78	52.209	Gopherus_agassizii
MGP_SPRETEiJ_G0018069	Rdm1	99	72.438	ENSGGOG00000010584	RDM1	96	81.203	Gorilla_gorilla
MGP_SPRETEiJ_G0018069	Rdm1	98	33.333	ENSHCOG00000002518	-	89	35.081	Hippocampus_comes
MGP_SPRETEiJ_G0018069	Rdm1	98	74.194	ENSSTOG00000022491	RDM1	98	74.194	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0018069	Rdm1	99	70.213	ENSLAFG00000029300	RDM1	99	70.213	Loxodonta_africana
MGP_SPRETEiJ_G0018069	Rdm1	99	73.145	ENSMFAG00000032968	RDM1	96	82.707	Macaca_fascicularis
MGP_SPRETEiJ_G0018069	Rdm1	99	73.498	ENSMMUG00000006847	RDM1	95	80.000	Macaca_mulatta
MGP_SPRETEiJ_G0018069	Rdm1	99	73.145	ENSMNEG00000039977	RDM1	96	82.707	Macaca_nemestrina
MGP_SPRETEiJ_G0018069	Rdm1	99	73.498	ENSMLEG00000041158	RDM1	95	80.000	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0018069	Rdm1	91	49.612	ENSMGAG00000008774	RDM1	96	51.653	Meleagris_gallopavo
MGP_SPRETEiJ_G0018069	Rdm1	100	83.274	ENSMAUG00000018559	Rdm1	100	83.274	Mesocricetus_auratus
MGP_SPRETEiJ_G0018069	Rdm1	99	73.852	ENSMICG00000038651	RDM1	99	73.852	Microcebus_murinus
MGP_SPRETEiJ_G0018069	Rdm1	97	79.487	ENSMOCG00000015095	Rdm1	99	78.388	Microtus_ochrogaster
MGP_SPRETEiJ_G0018069	Rdm1	97	60.870	ENSMODG00000011101	RDM1	100	60.870	Monodelphis_domestica
MGP_SPRETEiJ_G0018069	Rdm1	100	96.441	MGP_CAROLIEiJ_G0017226	Rdm1	100	96.441	Mus_caroli
MGP_SPRETEiJ_G0018069	Rdm1	100	97.153	ENSMUSG00000010362	Rdm1	100	97.153	Mus_musculus
MGP_SPRETEiJ_G0018069	Rdm1	100	94.306	MGP_PahariEiJ_G0018356	Rdm1	100	94.306	Mus_pahari
MGP_SPRETEiJ_G0018069	Rdm1	98	74.733	ENSMPUG00000008363	RDM1	98	74.733	Mustela_putorius_furo
MGP_SPRETEiJ_G0018069	Rdm1	99	73.498	ENSNLEG00000014173	RDM1	91	82.407	Nomascus_leucogenys
MGP_SPRETEiJ_G0018069	Rdm1	88	61.753	ENSMEUG00000015826	RDM1	98	62.449	Notamacropus_eugenii
MGP_SPRETEiJ_G0018069	Rdm1	91	69.231	ENSOCUG00000022704	RDM1	97	70.120	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0018069	Rdm1	100	71.479	ENSOGAG00000011332	RDM1	100	71.479	Otolemur_garnettii
MGP_SPRETEiJ_G0018069	Rdm1	99	72.792	ENSPPAG00000029969	RDM1	99	72.792	Pan_paniscus
MGP_SPRETEiJ_G0018069	Rdm1	99	73.145	ENSPTRG00000009031	RDM1	96	81.955	Pan_troglodytes
MGP_SPRETEiJ_G0018069	Rdm1	99	73.498	ENSPANG00000022933	RDM1	96	82.707	Papio_anubis
MGP_SPRETEiJ_G0018069	Rdm1	96	82.156	ENSPEMG00000018985	Rdm1	100	81.139	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0018069	Rdm1	99	71.731	ENSPPYG00000008198	RDM1	99	71.731	Pongo_abelii
MGP_SPRETEiJ_G0018069	Rdm1	99	71.025	ENSPCOG00000017995	RDM1	96	78.195	Propithecus_coquereli
MGP_SPRETEiJ_G0018069	Rdm1	88	72.510	ENSPVAG00000001116	RDM1	99	72.400	Pteropus_vampyrus
MGP_SPRETEiJ_G0018069	Rdm1	100	92.527	ENSRNOG00000020751	Rdm1	100	92.527	Rattus_norvegicus
MGP_SPRETEiJ_G0018069	Rdm1	99	72.085	ENSRBIG00000030000	RDM1	96	82.707	Rhinopithecus_bieti
MGP_SPRETEiJ_G0018069	Rdm1	99	72.438	ENSRROG00000035242	RDM1	95	80.000	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0018069	Rdm1	97	63.768	ENSSHAG00000013584	RDM1	100	63.768	Sarcophilus_harrisii
MGP_SPRETEiJ_G0018069	Rdm1	91	49.810	ENSSPUG00000010941	RDM1	89	49.801	Sphenodon_punctatus
MGP_SPRETEiJ_G0018069	Rdm1	90	31.128	ENSSPAG00000011690	-	86	32.353	Stegastes_partitus
MGP_SPRETEiJ_G0018069	Rdm1	87	60.246	ENSSSCG00000017574	-	93	65.158	Sus_scrofa
MGP_SPRETEiJ_G0018069	Rdm1	86	58.607	ENSTBEG00000010030	RDM1	97	58.607	Tupaia_belangeri
MGP_SPRETEiJ_G0018069	Rdm1	98	76.512	ENSUAMG00000027279	RDM1	98	76.512	Ursus_americanus
MGP_SPRETEiJ_G0018069	Rdm1	98	76.512	ENSUMAG00000015423	RDM1	96	76.512	Ursus_maritimus