EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0018098 (Gene tree)
Gene ID: -
Gene Symbol: Gpatch8
Alias: 5430405G24Rik|ENSMUSG00000075516|Fbm1|Gpatc8
Full Name: G patch domain containing 8
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 86688 bases
Position: chr11:104248979-104335666
Accession: 1918667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0031719	zf-C2H2_jaz	PF12171.8	4.9e-06	1	1
MGP_SPRETEiJ_P0031719	G-patch	PF01585.23	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0031719	-	6879	-	MGP_SPRETEiJ_P0031719	1509 (aa)	-	-
MGP_SPRETEiJ_T0031721	-	390	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0031722	-	387	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0031723	-	432	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0031724	-	894	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0031720	-	5612	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0018098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0018098's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0018098	Gpatch8	100	89.050	ENSG00000186566	GPATCH8	93	100.000	Homo_sapiens
MGP_SPRETEiJ_G0018098	Gpatch8	99	87.847	ENSAMEG00000018376	GPATCH8	99	88.771	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0018098	Gpatch8	99	65.531	ENSAPLG00000003095	GPATCH8	55	63.158	Anas_platyrhynchos
MGP_SPRETEiJ_G0018098	Gpatch8	100	64.863	ENSACAG00000012522	GPATCH8	55	58.968	Anolis_carolinensis
MGP_SPRETEiJ_G0018098	Gpatch8	100	87.995	ENSANAG00000032773	GPATCH8	100	88.918	Aotus_nancymaae
MGP_SPRETEiJ_G0018098	Gpatch8	100	88.603	ENSBTAG00000038316	GPATCH8	100	89.262	Bos_taurus
MGP_SPRETEiJ_G0018098	Gpatch8	100	87.467	ENSCJAG00000009807	GPATCH8	100	88.391	Callithrix_jacchus
MGP_SPRETEiJ_G0018098	Gpatch8	100	88.852	ENSCAFG00000014136	GPATCH8	100	89.116	Canis_familiaris
MGP_SPRETEiJ_G0018098	Gpatch8	99	88.756	ENSCAFG00020009830	GPATCH8	99	89.022	Canis_lupus_dingo
MGP_SPRETEiJ_G0018098	Gpatch8	99	87.549	ENSCHIG00000008962	GPATCH8	99	88.638	Capra_hircus
MGP_SPRETEiJ_G0018098	Gpatch8	100	81.974	ENSTSYG00000033153	GPATCH8	100	82.640	Carlito_syrichta
MGP_SPRETEiJ_G0018098	Gpatch8	99	76.088	ENSCPOG00000039068	GPATCH8	53	68.182	Cavia_porcellus
MGP_SPRETEiJ_G0018098	Gpatch8	100	87.665	ENSCCAG00000030686	GPATCH8	100	88.984	Cebus_capucinus
MGP_SPRETEiJ_G0018098	Gpatch8	100	88.588	ENSCATG00000028156	GPATCH8	100	89.512	Cercocebus_atys
MGP_SPRETEiJ_G0018098	Gpatch8	100	88.391	ENSCSAG00000003586	GPATCH8	100	89.314	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0018098	Gpatch8	100	68.013	ENSCPBG00000008955	GPATCH8	55	62.130	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0018098	Gpatch8	100	87.731	ENSCANG00000039731	GPATCH8	100	89.050	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0018098	Gpatch8	100	91.595	ENSCGRG00001020210	Gpatch8	100	91.529	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0018098	Gpatch8	100	91.595	ENSCGRG00000017090	Gpatch8	100	91.529	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0018098	Gpatch8	100	87.657	ENSDNOG00000005102	GPATCH8	100	87.393	Dasypus_novemcinctus
MGP_SPRETEiJ_G0018098	Gpatch8	100	89.578	ENSDORG00000027664	Gpatch8	100	89.512	Dipodomys_ordii
MGP_SPRETEiJ_G0018098	Gpatch8	100	82.816	ENSETEG00000001325	GPATCH8	100	83.609	Echinops_telfairi
MGP_SPRETEiJ_G0018098	Gpatch8	67	47.565	ENSEBUG00000005749	gpatch8	70	48.756	Eptatretus_burgeri
MGP_SPRETEiJ_G0018098	Gpatch8	100	89.036	ENSEASG00005010264	GPATCH8	92	89.828	Equus_asinus_asinus
MGP_SPRETEiJ_G0018098	Gpatch8	100	89.498	ENSECAG00000040232	GPATCH8	99	89.762	Equus_caballus
MGP_SPRETEiJ_G0018098	Gpatch8	94	100.000	ENSEEUG00000008586	GPATCH8	94	100.000	Erinaceus_europaeus
MGP_SPRETEiJ_G0018098	Gpatch8	55	86.747	ENSFCAG00000043334	GPATCH8	56	86.842	Felis_catus
MGP_SPRETEiJ_G0018098	Gpatch8	99	65.377	ENSFALG00000009554	GPATCH8	55	62.110	Ficedula_albicollis
MGP_SPRETEiJ_G0018098	Gpatch8	99	63.757	ENSGALG00000041556	GPATCH8	50	63.540	Gallus_gallus
MGP_SPRETEiJ_G0018098	Gpatch8	100	67.276	ENSGAGG00000008358	GPATCH8	55	62.989	Gopherus_agassizii
MGP_SPRETEiJ_G0018098	Gpatch8	100	86.807	ENSGGOG00000013860	GPATCH8	100	85.026	Gorilla_gorilla
MGP_SPRETEiJ_G0018098	Gpatch8	100	73.719	ENSHGLG00000017687	GPATCH8	55	67.895	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0018098	Gpatch8	74	78.061	ENSHGLG00100010738	GPATCH8	97	78.061	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0018098	Gpatch8	100	89.175	ENSSTOG00000025022	GPATCH8	100	89.109	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0018098	Gpatch8	100	88.317	ENSJJAG00000017797	Gpatch8	100	88.383	Jaculus_jaculus
MGP_SPRETEiJ_G0018098	Gpatch8	51	57.216	ENSLACG00000017530	GPATCH8	54	55.662	Latimeria_chalumnae
MGP_SPRETEiJ_G0018098	Gpatch8	72	88.192	ENSLAFG00000032250	GPATCH8	100	86.293	Loxodonta_africana
MGP_SPRETEiJ_G0018098	Gpatch8	100	88.588	ENSMFAG00000039126	GPATCH8	100	89.512	Macaca_fascicularis
MGP_SPRETEiJ_G0018098	Gpatch8	100	88.588	ENSMMUG00000012658	GPATCH8	100	89.512	Macaca_mulatta
MGP_SPRETEiJ_G0018098	Gpatch8	100	88.654	ENSMNEG00000031426	GPATCH8	100	89.578	Macaca_nemestrina
MGP_SPRETEiJ_G0018098	Gpatch8	100	88.588	ENSMLEG00000038860	GPATCH8	100	89.512	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0018098	Gpatch8	100	92.583	ENSMAUG00000021770	Gpatch8	100	92.517	Mesocricetus_auratus
MGP_SPRETEiJ_G0018098	Gpatch8	100	88.977	ENSMICG00000028586	GPATCH8	100	87.261	Microcebus_murinus
MGP_SPRETEiJ_G0018098	Gpatch8	100	91.071	ENSMOCG00000001658	Gpatch8	100	91.733	Microtus_ochrogaster
MGP_SPRETEiJ_G0018098	Gpatch8	100	97.815	MGP_CAROLIEiJ_G0017255	Gpatch8	100	97.815	Mus_caroli
MGP_SPRETEiJ_G0018098	Gpatch8	100	99.205	ENSMUSG00000034621	Gpatch8	100	99.205	Mus_musculus
MGP_SPRETEiJ_G0018098	Gpatch8	100	97.152	MGP_PahariEiJ_G0018385	Gpatch8	100	97.152	Mus_pahari
MGP_SPRETEiJ_G0018098	Gpatch8	100	87.533	ENSMPUG00000009274	GPATCH8	100	88.391	Mustela_putorius_furo
MGP_SPRETEiJ_G0018098	Gpatch8	93	95.270	ENSMLUG00000013840	GPATCH8	99	95.270	Myotis_lucifugus
MGP_SPRETEiJ_G0018098	Gpatch8	100	91.077	ENSNGAG00000021860	Gpatch8	100	90.615	Nannospalax_galili
MGP_SPRETEiJ_G0018098	Gpatch8	78	75.781	ENSMEUG00000011799	GPATCH8	72	74.344	Notamacropus_eugenii
MGP_SPRETEiJ_G0018098	Gpatch8	100	79.090	ENSOPRG00000008816	GPATCH8	100	78.760	Ochotona_princeps
MGP_SPRETEiJ_G0018098	Gpatch8	100	85.545	ENSOCUG00000003291	GPATCH8	100	87.261	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0018098	Gpatch8	97	87.864	ENSOGAG00000033643	GPATCH8	100	87.051	Otolemur_garnettii
MGP_SPRETEiJ_G0018098	Gpatch8	100	82.938	ENSOARG00000008370	GPATCH8	100	84.519	Ovis_aries
MGP_SPRETEiJ_G0018098	Gpatch8	100	88.720	ENSPPAG00000040523	GPATCH8	100	88.984	Pan_paniscus
MGP_SPRETEiJ_G0018098	Gpatch8	100	88.786	ENSPPRG00000023310	GPATCH8	100	89.050	Panthera_pardus
MGP_SPRETEiJ_G0018098	Gpatch8	100	87.005	ENSPTIG00000020001	GPATCH8	100	87.071	Panthera_tigris_altaica
MGP_SPRETEiJ_G0018098	Gpatch8	100	88.786	ENSPTRG00000009278	GPATCH8	100	89.050	Pan_troglodytes
MGP_SPRETEiJ_G0018098	Gpatch8	100	88.522	ENSPANG00000021304	GPATCH8	100	89.446	Papio_anubis
MGP_SPRETEiJ_G0018098	Gpatch8	100	92.649	ENSPEMG00000008337	Gpatch8	100	92.583	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0018098	Gpatch8	100	87.665	ENSPPYG00000008329	GPATCH8	100	88.588	Pongo_abelii
MGP_SPRETEiJ_G0018098	Gpatch8	77	100.000	ENSPCAG00000004441	GPATCH8	77	100.000	Procavia_capensis
MGP_SPRETEiJ_G0018098	Gpatch8	100	86.799	ENSPCOG00000019209	GPATCH8	100	87.063	Propithecus_coquereli
MGP_SPRETEiJ_G0018098	Gpatch8	100	87.203	ENSPVAG00000003155	GPATCH8	100	88.061	Pteropus_vampyrus
MGP_SPRETEiJ_G0018098	Gpatch8	100	93.865	ENSRNOG00000021044	Gpatch8	100	93.140	Rattus_norvegicus
MGP_SPRETEiJ_G0018098	Gpatch8	100	89.116	ENSRBIG00000033713	GPATCH8	100	89.380	Rhinopithecus_bieti
MGP_SPRETEiJ_G0018098	Gpatch8	100	89.116	ENSRROG00000029623	GPATCH8	100	89.380	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0018098	Gpatch8	100	88.852	ENSSBOG00000023544	GPATCH8	100	89.116	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0018098	Gpatch8	100	84.763	ENSSARG00000007516	GPATCH8	100	84.301	Sorex_araneus
MGP_SPRETEiJ_G0018098	Gpatch8	100	89.050	ENSSSCG00000017357	ITGA2B	100	89.152	Sus_scrofa
MGP_SPRETEiJ_G0018098	Gpatch8	91	95.639	ENSTBEG00000009486	GPATCH8	91	95.639	Tupaia_belangeri
MGP_SPRETEiJ_G0018098	Gpatch8	99	84.221	ENSTTRG00000010527	GPATCH8	100	84.953	Tursiops_truncatus
MGP_SPRETEiJ_G0018098	Gpatch8	95	85.675	ENSUMAG00000013891	GPATCH8	54	85.620	Ursus_maritimus
MGP_SPRETEiJ_G0018098	Gpatch8	91	87.055	ENSVPAG00000006937	GPATCH8	61	85.114	Vicugna_pacos
MGP_SPRETEiJ_G0018098	Gpatch8	100	88.852	ENSVVUG00000017996	GPATCH8	100	89.050	Vulpes_vulpes