EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0018272 (Gene tree)
Gene ID: -
Gene Symbol: Unk
Alias: B230379M23Rik|Zc3h5
Full Name: unkempt family zinc finger
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 31149 bases
Position: chr11:118702053-118733201
Accession: 2442456
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0032500	zf-CCCH	PF00642.24	0.00041	1	1
MGP_SPRETEiJ_P0032499	zf-CCCH	PF00642.24	0.00042	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0032499	-	3739	-	MGP_SPRETEiJ_P0032499	810 (aa)	-	-
MGP_SPRETEiJ_T0032501	-	471	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0032500	-	3700	-	MGP_SPRETEiJ_P0032500	797 (aa)	-	-
MGP_SPRETEiJ_T0032503	-	817	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0032502	-	3696	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0032505	-	600	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0032504	-	724	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0018272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0018272's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0018272	Unk	80	77.627	MGP_SPRETEiJ_G0022136	Unkl	91	77.627

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSG00000132478	UNK	97	100.000	Homo_sapiens
MGP_SPRETEiJ_G0018272	Unk	98	95.575	ENSAMEG00000009769	UNK	89	95.575	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0018272	Unk	96	57.305	ENSATEG00000004212	unk	94	57.396	Anabas_testudineus
MGP_SPRETEiJ_G0018272	Unk	96	87.773	ENSAPLG00000014891	UNK	100	87.773	Anas_platyrhynchos
MGP_SPRETEiJ_G0018272	Unk	100	84.281	ENSACAG00000007303	UNK	98	85.130	Anolis_carolinensis
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSANAG00000017139	UNK	98	95.322	Aotus_nancymaae
MGP_SPRETEiJ_G0018272	Unk	62	62.933	ENSAMXG00000031804	unk	55	63.022	Astyanax_mexicanus
MGP_SPRETEiJ_G0018272	Unk	98	94.943	ENSBTAG00000016287	UNK	98	94.943	Bos_taurus
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSCJAG00000014056	UNK	98	95.322	Callithrix_jacchus
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSCAFG00000004925	UNK	89	95.322	Canis_familiaris
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSCAFG00020004454	UNK	98	95.322	Canis_lupus_dingo
MGP_SPRETEiJ_G0018272	Unk	98	94.564	ENSCHIG00000015385	UNK	98	94.564	Capra_hircus
MGP_SPRETEiJ_G0018272	Unk	98	95.070	ENSTSYG00000008096	UNK	98	95.070	Carlito_syrichta
MGP_SPRETEiJ_G0018272	Unk	85	97.819	ENSCAPG00000008657	UNK	93	97.819	Cavia_aperea
MGP_SPRETEiJ_G0018272	Unk	98	95.954	ENSCPOG00000012679	UNK	98	95.954	Cavia_porcellus
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSCCAG00000031100	UNK	98	95.322	Cebus_capucinus
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSCATG00000038041	UNK	98	95.322	Cercocebus_atys
MGP_SPRETEiJ_G0018272	Unk	98	96.334	ENSCLAG00000008106	UNK	98	96.334	Chinchilla_lanigera
MGP_SPRETEiJ_G0018272	Unk	98	95.196	ENSCSAG00000004859	UNK	98	95.196	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0018272	Unk	100	84.764	ENSCPBG00000028046	UNK	99	85.624	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0018272	Unk	98	95.449	ENSCANG00000033795	UNK	98	95.449	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0018272	Unk	100	97.407	ENSCGRG00001024874	Unk	100	97.407	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0018272	Unk	100	97.037	ENSCGRG00000008631	Unk	100	97.037	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0018272	Unk	96	58.077	ENSCSEG00000020209	unk	95	58.450	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0018272	Unk	96	58.493	ENSDARG00000000935	unk	94	59.642	Danio_rerio
MGP_SPRETEiJ_G0018272	Unk	98	94.185	ENSDNOG00000038145	UNK	86	94.185	Dasypus_novemcinctus
MGP_SPRETEiJ_G0018272	Unk	98	96.081	ENSDORG00000008133	Unk	98	96.081	Dipodomys_ordii
MGP_SPRETEiJ_G0018272	Unk	73	86.464	ENSETEG00000019640	UNK	100	86.885	Echinops_telfairi
MGP_SPRETEiJ_G0018272	Unk	98	95.702	ENSEASG00005002430	UNK	98	95.702	Equus_asinus_asinus
MGP_SPRETEiJ_G0018272	Unk	98	95.575	ENSECAG00000024672	UNK	99	95.484	Equus_caballus
MGP_SPRETEiJ_G0018272	Unk	85	100.000	ENSEEUG00000013779	UNK	85	100.000	Erinaceus_europaeus
MGP_SPRETEiJ_G0018272	Unk	96	56.305	ENSELUG00000023290	unk	95	57.054	Esox_lucius
MGP_SPRETEiJ_G0018272	Unk	98	95.070	ENSFCAG00000005757	UNK	98	95.070	Felis_catus
MGP_SPRETEiJ_G0018272	Unk	96	87.629	ENSFALG00000001035	UNK	94	87.629	Ficedula_albicollis
MGP_SPRETEiJ_G0018272	Unk	98	94.697	ENSFDAG00000009316	UNK	98	94.697	Fukomys_damarensis
MGP_SPRETEiJ_G0018272	Unk	83	73.795	ENSGMOG00000014314	unk	81	74.174	Gadus_morhua
MGP_SPRETEiJ_G0018272	Unk	100	85.006	ENSGALG00000002278	UNK	98	85.998	Gallus_gallus
MGP_SPRETEiJ_G0018272	Unk	100	84.764	ENSGAGG00000007411	UNK	98	85.750	Gopherus_agassizii
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSGGOG00000009203	UNK	98	95.322	Gorilla_gorilla
MGP_SPRETEiJ_G0018272	Unk	100	96.790	ENSHGLG00000007512	UNK	100	96.790	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0018272	Unk	100	96.790	ENSHGLG00100002318	UNK	100	96.790	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0018272	Unk	96	56.163	ENSIPUG00000004291	UNK	94	57.717	Ictalurus_punctatus
MGP_SPRETEiJ_G0018272	Unk	91	95.277	ENSSTOG00000013344	UNK	97	95.020	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0018272	Unk	100	96.543	ENSJJAG00000009816	Unk	100	96.543	Jaculus_jaculus
MGP_SPRETEiJ_G0018272	Unk	100	71.707	ENSLACG00000014044	UNK	97	72.739	Latimeria_chalumnae
MGP_SPRETEiJ_G0018272	Unk	97	66.374	ENSLOCG00000011578	unk	95	65.957	Lepisosteus_oculatus
MGP_SPRETEiJ_G0018272	Unk	98	93.821	ENSLAFG00000022662	UNK	98	93.821	Loxodonta_africana
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSMFAG00000037148	UNK	98	95.322	Macaca_fascicularis
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSMMUG00000013646	UNK	98	95.322	Macaca_mulatta
MGP_SPRETEiJ_G0018272	Unk	98	95.449	ENSMNEG00000036240	UNK	98	95.449	Macaca_nemestrina
MGP_SPRETEiJ_G0018272	Unk	98	94.943	ENSMLEG00000043327	UNK	98	94.943	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0018272	Unk	96	56.516	ENSMAMG00000001390	unk	94	56.873	Mastacembelus_armatus
MGP_SPRETEiJ_G0018272	Unk	96	85.057	ENSMGAG00000004713	UNK	100	85.057	Meleagris_gallopavo
MGP_SPRETEiJ_G0018272	Unk	100	97.654	ENSMAUG00000011025	Unk	100	97.654	Mesocricetus_auratus
MGP_SPRETEiJ_G0018272	Unk	98	95.449	ENSMICG00000007591	UNK	98	95.449	Microcebus_murinus
MGP_SPRETEiJ_G0018272	Unk	100	97.901	ENSMOCG00000021657	Unk	100	97.901	Microtus_ochrogaster
MGP_SPRETEiJ_G0018272	Unk	96	56.921	ENSMMOG00000004874	unk	94	58.194	Mola_mola
MGP_SPRETEiJ_G0018272	Unk	97	86.469	ENSMODG00000007684	UNK	85	86.563	Monodelphis_domestica
MGP_SPRETEiJ_G0018272	Unk	100	99.506	MGP_CAROLIEiJ_G0017427	Unk	100	99.506	Mus_caroli
MGP_SPRETEiJ_G0018272	Unk	100	99.753	ENSMUSG00000020770	Unk	100	99.753	Mus_musculus
MGP_SPRETEiJ_G0018272	Unk	100	98.889	MGP_PahariEiJ_G0018556	Unk	100	98.889	Mus_pahari
MGP_SPRETEiJ_G0018272	Unk	98	94.207	ENSMPUG00000013806	UNK	98	94.207	Mustela_putorius_furo
MGP_SPRETEiJ_G0018272	Unk	98	94.690	ENSMLUG00000015453	UNK	98	94.690	Myotis_lucifugus
MGP_SPRETEiJ_G0018272	Unk	100	96.790	ENSNGAG00000012366	Unk	100	96.790	Nannospalax_galili
MGP_SPRETEiJ_G0018272	Unk	100	89.506	ENSNLEG00000001120	UNK	98	91.244	Nomascus_leucogenys
MGP_SPRETEiJ_G0018272	Unk	97	86.023	ENSMEUG00000004094	UNK	97	86.242	Notamacropus_eugenii
MGP_SPRETEiJ_G0018272	Unk	100	92.963	ENSOPRG00000012784	UNK	98	93.047	Ochotona_princeps
MGP_SPRETEiJ_G0018272	Unk	98	89.886	ENSODEG00000010183	UNK	98	89.633	Octodon_degus
MGP_SPRETEiJ_G0018272	Unk	98	93.805	ENSOCUG00000014994	UNK	98	93.805	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0018272	Unk	96	55.527	ENSORLG00000028573	unk	94	57.344	Oryzias_latipes
MGP_SPRETEiJ_G0018272	Unk	96	54.113	ENSOMEG00000009977	unk	95	55.598	Oryzias_melastigma
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSOGAG00000001922	UNK	90	95.322	Otolemur_garnettii
MGP_SPRETEiJ_G0018272	Unk	98	84.080	ENSOARG00000009548	UNK	97	84.080	Ovis_aries
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSPPAG00000032800	UNK	98	95.322	Pan_paniscus
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSPPRG00000008948	UNK	98	95.322	Panthera_pardus
MGP_SPRETEiJ_G0018272	Unk	98	95.196	ENSPTIG00000005435	UNK	98	95.196	Panthera_tigris_altaica
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSPTRG00000009656	UNK	98	95.322	Pan_troglodytes
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSPANG00000020121	UNK	98	95.322	Papio_anubis
MGP_SPRETEiJ_G0018272	Unk	96	56.361	ENSPKIG00000022222	unk	94	58.196	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0018272	Unk	79	79.666	ENSPSIG00000009640	UNK	100	79.666	Pelodiscus_sinensis
MGP_SPRETEiJ_G0018272	Unk	96	56.870	ENSPMGG00000021574	unk	93	57.687	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0018272	Unk	100	97.654	ENSPEMG00000016145	Unk	100	97.654	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0018272	Unk	99	89.938	ENSPCIG00000020300	UNK	85	89.822	Phascolarctos_cinereus
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSPPYG00000008637	UNK	98	95.322	Pongo_abelii
MGP_SPRETEiJ_G0018272	Unk	88	88.155	ENSPCAG00000004504	UNK	88	88.155	Procavia_capensis
MGP_SPRETEiJ_G0018272	Unk	98	95.449	ENSPCOG00000027411	UNK	98	95.449	Propithecus_coquereli
MGP_SPRETEiJ_G0018272	Unk	92	98.370	ENSPVAG00000008460	UNK	92	98.370	Pteropus_vampyrus
MGP_SPRETEiJ_G0018272	Unk	95	59.346	ENSPNAG00000011973	unk	93	59.922	Pygocentrus_nattereri
MGP_SPRETEiJ_G0018272	Unk	100	98.025	ENSRNOG00000006600	Unk	100	98.025	Rattus_norvegicus
MGP_SPRETEiJ_G0018272	Unk	98	95.575	ENSRBIG00000025523	UNK	98	95.575	Rhinopithecus_bieti
MGP_SPRETEiJ_G0018272	Unk	98	95.449	ENSRROG00000013651	UNK	98	95.449	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0018272	Unk	98	95.322	ENSSBOG00000019483	UNK	98	95.322	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0018272	Unk	97	89.607	ENSSHAG00000017696	UNK	97	89.708	Sarcophilus_harrisii
MGP_SPRETEiJ_G0018272	Unk	96	56.041	ENSSFOG00015003052	unk	90	60.391	Scleropages_formosus
MGP_SPRETEiJ_G0018272	Unk	96	57.564	ENSSDUG00000012373	unk	94	58.259	Seriola_dumerili
MGP_SPRETEiJ_G0018272	Unk	96	56.760	ENSSLDG00000001990	unk	94	58.015	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0018272	Unk	99	81.852	ENSSPUG00000008526	UNK	97	84.347	Sphenodon_punctatus
MGP_SPRETEiJ_G0018272	Unk	98	94.943	ENSSSCG00000017201	UNK	98	94.943	Sus_scrofa
MGP_SPRETEiJ_G0018272	Unk	97	87.245	ENSTGUG00000008279	UNK	98	87.105	Taeniopygia_guttata
MGP_SPRETEiJ_G0018272	Unk	52	98.039	ENSTBEG00000016178	-	53	98.039	Tupaia_belangeri
MGP_SPRETEiJ_G0018272	Unk	92	98.034	ENSTTRG00000015890	UNK	90	98.324	Tursiops_truncatus
MGP_SPRETEiJ_G0018272	Unk	96	91.484	ENSUAMG00000003483	UNK	97	91.484	Ursus_americanus
MGP_SPRETEiJ_G0018272	Unk	96	95.484	ENSUMAG00000010576	UNK	99	95.484	Ursus_maritimus
MGP_SPRETEiJ_G0018272	Unk	56	96.078	ENSVPAG00000011532	-	57	96.078	Vicugna_pacos
MGP_SPRETEiJ_G0018272	Unk	100	98.365	ENSVVUG00000014786	UNK	100	98.365	Vulpes_vulpes
MGP_SPRETEiJ_G0018272	Unk	97	78.003	ENSXETG00000012578	unk	96	78.471	Xenopus_tropicalis