EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0018534 (Gene tree)
Gene ID: -
Gene Symbol: Twistnb
Alias: 2810024J17Rik|D16Wsu83e
Full Name: twist basic helix-loop-helix transcription factor 1 neighbor
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 10409 bases
Position: chr12:25690194-25700602
Accession: 106292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0033613	SHS2_Rpb7-N	PF03876.17	2.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0033613	-	2326	-	MGP_SPRETEiJ_P0033613	330 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0018534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0018534's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0018534	Twistnb	99	75.758	ENSG00000105849	TWISTNB	96	75.529	Homo_sapiens
MGP_SPRETEiJ_G0018534	Twistnb	65	52.582	ENSAPOG00000011796	twistnb	55	53.271	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0018534	Twistnb	100	65.625	ENSAMEG00000008558	TWISTNB	98	65.195	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0018534	Twistnb	94	41.056	ENSACIG00000020400	twistnb	84	43.505	Amphilophus_citrinellus
MGP_SPRETEiJ_G0018534	Twistnb	62	54.680	ENSAOCG00000024200	twistnb	53	54.680	Amphiprion_ocellaris
MGP_SPRETEiJ_G0018534	Twistnb	62	55.172	ENSAPEG00000016750	twistnb	53	55.172	Amphiprion_percula
MGP_SPRETEiJ_G0018534	Twistnb	51	63.905	ENSACAG00000011817	TWISTNB	86	63.905	Anolis_carolinensis
MGP_SPRETEiJ_G0018534	Twistnb	99	75.758	ENSANAG00000026418	TWISTNB	99	74.481	Aotus_nancymaae
MGP_SPRETEiJ_G0018534	Twistnb	56	55.914	ENSAMXG00000035868	twistnb	55	56.906	Astyanax_mexicanus
MGP_SPRETEiJ_G0018534	Twistnb	100	72.537	ENSBTAG00000006721	TWISTNB	99	71.642	Bos_taurus
MGP_SPRETEiJ_G0018534	Twistnb	99	76.435	ENSCJAG00000001148	TWISTNB	99	75.221	Callithrix_jacchus
MGP_SPRETEiJ_G0018534	Twistnb	100	69.942	ENSCAFG00000002511	TWISTNB	99	72.254	Canis_familiaris
MGP_SPRETEiJ_G0018534	Twistnb	100	70.760	ENSCAFG00020002140	TWISTNB	92	73.099	Canis_lupus_dingo
MGP_SPRETEiJ_G0018534	Twistnb	94	74.038	ENSCHIG00000024078	TWISTNB	95	74.534	Capra_hircus
MGP_SPRETEiJ_G0018534	Twistnb	100	74.260	ENSTSYG00000001471	TWISTNB	99	74.260	Carlito_syrichta
MGP_SPRETEiJ_G0018534	Twistnb	100	76.627	ENSCPOG00000031651	TWISTNB	99	76.627	Cavia_porcellus
MGP_SPRETEiJ_G0018534	Twistnb	99	75.988	ENSCCAG00000026416	TWISTNB	99	75.371	Cebus_capucinus
MGP_SPRETEiJ_G0018534	Twistnb	99	74.848	ENSCATG00000035621	TWISTNB	96	74.622	Cercocebus_atys
MGP_SPRETEiJ_G0018534	Twistnb	100	76.991	ENSCLAG00000012696	TWISTNB	99	76.627	Chinchilla_lanigera
MGP_SPRETEiJ_G0018534	Twistnb	99	75.152	ENSCSAG00000013544	TWISTNB	96	74.924	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0018534	Twistnb	79	83.333	ENSCHOG00000006034	TWISTNB	78	83.333	Choloepus_hoffmanni
MGP_SPRETEiJ_G0018534	Twistnb	91	60.596	ENSCPBG00000000367	TWISTNB	92	60.396	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0018534	Twistnb	99	75.152	ENSCANG00000038759	TWISTNB	96	74.924	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0018534	Twistnb	100	83.939	ENSCGRG00001000499	Twistnb	100	83.636	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0018534	Twistnb	100	72.917	ENSDNOG00000006438	-	99	72.997	Dasypus_novemcinctus
MGP_SPRETEiJ_G0018534	Twistnb	93	74.757	ENSDORG00000007795	Twistnb	99	74.224	Dipodomys_ordii
MGP_SPRETEiJ_G0018534	Twistnb	100	76.558	ENSEASG00005021702	TWISTNB	95	76.261	Equus_asinus_asinus
MGP_SPRETEiJ_G0018534	Twistnb	100	76.558	ENSECAG00000014563	TWISTNB	95	76.261	Equus_caballus
MGP_SPRETEiJ_G0018534	Twistnb	94	44.910	ENSELUG00000000098	TWISTNB	82	48.197	Esox_lucius
MGP_SPRETEiJ_G0018534	Twistnb	98	78.638	ENSFCAG00000025987	TWISTNB	99	76.488	Felis_catus
MGP_SPRETEiJ_G0018534	Twistnb	79	52.158	ENSFALG00000009761	TWISTNB	89	51.786	Ficedula_albicollis
MGP_SPRETEiJ_G0018534	Twistnb	98	76.596	ENSFDAG00000017368	TWISTNB	99	75.668	Fukomys_damarensis
MGP_SPRETEiJ_G0018534	Twistnb	56	58.919	ENSFHEG00000013318	twistnb	50	58.919	Fundulus_heteroclitus
MGP_SPRETEiJ_G0018534	Twistnb	85	58.681	ENSGALG00000010863	TWISTNB	69	58.537	Gallus_gallus
MGP_SPRETEiJ_G0018534	Twistnb	61	51.923	ENSGACG00000006425	twistnb	66	55.747	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0018534	Twistnb	99	76.061	ENSGGOG00000026888	TWISTNB	96	75.831	Gorilla_gorilla
MGP_SPRETEiJ_G0018534	Twistnb	100	76.036	ENSHGLG00000010976	TWISTNB	99	75.964	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0018534	Twistnb	98	77.607	ENSHGLG00100005410	TWISTNB	99	75.964	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0018534	Twistnb	61	51.244	ENSIPUG00000004117	twistnb	55	51.244	Ictalurus_punctatus
MGP_SPRETEiJ_G0018534	Twistnb	100	78.571	ENSSTOG00000022702	TWISTNB	92	77.976	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0018534	Twistnb	99	73.952	ENSJJAG00000015887	Twistnb	99	73.952	Jaculus_jaculus
MGP_SPRETEiJ_G0018534	Twistnb	53	58.621	ENSKMAG00000001591	twistnb	50	57.297	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0018534	Twistnb	90	52.396	ENSLACG00000010508	TWISTNB	54	67.725	Latimeria_chalumnae
MGP_SPRETEiJ_G0018534	Twistnb	62	59.709	ENSLOCG00000011399	twistnb	64	58.065	Lepisosteus_oculatus
MGP_SPRETEiJ_G0018534	Twistnb	100	75.074	ENSLAFG00000008755	TWISTNB	100	73.887	Loxodonta_africana
MGP_SPRETEiJ_G0018534	Twistnb	99	75.152	ENSMFAG00000045328	TWISTNB	96	74.924	Macaca_fascicularis
MGP_SPRETEiJ_G0018534	Twistnb	99	75.152	ENSMMUG00000009609	TWISTNB	96	74.924	Macaca_mulatta
MGP_SPRETEiJ_G0018534	Twistnb	99	74.545	ENSMNEG00000041159	TWISTNB	96	74.320	Macaca_nemestrina
MGP_SPRETEiJ_G0018534	Twistnb	99	75.152	ENSMLEG00000042783	TWISTNB	96	74.924	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0018534	Twistnb	100	78.078	ENSMICG00000036489	TWISTNB	99	77.778	Microcebus_murinus
MGP_SPRETEiJ_G0018534	Twistnb	98	85.093	ENSMOCG00000003458	Twistnb	99	84.472	Microtus_ochrogaster
MGP_SPRETEiJ_G0018534	Twistnb	89	59.060	ENSMODG00000001402	-	65	58.923	Monodelphis_domestica
MGP_SPRETEiJ_G0018534	Twistnb	58	54.737	ENSMALG00000016407	twistnb	50	54.737	Monopterus_albus
MGP_SPRETEiJ_G0018534	Twistnb	100	98.489	MGP_CAROLIEiJ_G0017692	Twistnb	100	98.489	Mus_caroli
MGP_SPRETEiJ_G0018534	Twistnb	100	98.788	ENSMUSG00000020561	Twistnb	100	98.788	Mus_musculus
MGP_SPRETEiJ_G0018534	Twistnb	100	94.242	MGP_PahariEiJ_G0029450	Twistnb	100	94.242	Mus_pahari
MGP_SPRETEiJ_G0018534	Twistnb	100	74.925	ENSMPUG00000013948	TWISTNB	93	74.702	Mustela_putorius_furo
MGP_SPRETEiJ_G0018534	Twistnb	92	71.383	ENSMLUG00000008848	TWISTNB	99	72.347	Myotis_lucifugus
MGP_SPRETEiJ_G0018534	Twistnb	61	89.000	ENSNGAG00000022455	Twistnb	99	89.000	Nannospalax_galili
MGP_SPRETEiJ_G0018534	Twistnb	58	55.440	ENSNBRG00000008652	twistnb	52	55.440	Neolamprologus_brichardi
MGP_SPRETEiJ_G0018534	Twistnb	94	76.923	ENSNLEG00000035755	TWISTNB	91	76.997	Nomascus_leucogenys
MGP_SPRETEiJ_G0018534	Twistnb	100	71.091	ENSOPRG00000016109	TWISTNB	98	70.796	Ochotona_princeps
MGP_SPRETEiJ_G0018534	Twistnb	100	75.221	ENSODEG00000007222	TWISTNB	99	75.444	Octodon_degus
MGP_SPRETEiJ_G0018534	Twistnb	90	44.409	ENSORLG00020002579	twistnb	53	55.941	Oryzias_latipes_hni
MGP_SPRETEiJ_G0018534	Twistnb	99	76.667	ENSOGAG00000009189	TWISTNB	96	76.364	Otolemur_garnettii
MGP_SPRETEiJ_G0018534	Twistnb	94	74.277	ENSOARG00000009803	TWISTNB	98	72.107	Ovis_aries
MGP_SPRETEiJ_G0018534	Twistnb	99	76.061	ENSPPAG00000034623	TWISTNB	96	75.529	Pan_paniscus
MGP_SPRETEiJ_G0018534	Twistnb	98	77.709	ENSPPRG00000005877	TWISTNB	99	74.260	Panthera_pardus
MGP_SPRETEiJ_G0018534	Twistnb	89	76.667	ENSPTIG00000021539	TWISTNB	99	76.667	Panthera_tigris_altaica
MGP_SPRETEiJ_G0018534	Twistnb	99	76.061	ENSPTRG00000018962	TWISTNB	96	75.831	Pan_troglodytes
MGP_SPRETEiJ_G0018534	Twistnb	99	74.848	ENSPANG00000015736	TWISTNB	96	74.622	Papio_anubis
MGP_SPRETEiJ_G0018534	Twistnb	54	63.687	ENSPKIG00000025635	twistnb	51	61.290	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0018534	Twistnb	85	57.801	ENSPCIG00000017456	TWISTNB	88	57.432	Phascolarctos_cinereus
MGP_SPRETEiJ_G0018534	Twistnb	99	75.455	ENSPPYG00000017752	TWISTNB	96	75.152	Pongo_abelii
MGP_SPRETEiJ_G0018534	Twistnb	99	75.375	ENSPCOG00000017601	TWISTNB	98	76.577	Propithecus_coquereli
MGP_SPRETEiJ_G0018534	Twistnb	99	69.733	ENSPVAG00000015574	TWISTNB	98	71.302	Pteropus_vampyrus
MGP_SPRETEiJ_G0018534	Twistnb	58	56.701	ENSPNYG00000002674	twistnb	51	56.701	Pundamilia_nyererei
MGP_SPRETEiJ_G0018534	Twistnb	57	55.615	ENSPNAG00000011956	twistnb	51	55.615	Pygocentrus_nattereri
MGP_SPRETEiJ_G0018534	Twistnb	98	90.994	ENSRNOG00000010750	Twistnb	100	90.683	Rattus_norvegicus
MGP_SPRETEiJ_G0018534	Twistnb	99	75.152	ENSRBIG00000043007	TWISTNB	95	74.924	Rhinopithecus_bieti
MGP_SPRETEiJ_G0018534	Twistnb	99	75.152	ENSRROG00000040155	TWISTNB	96	74.924	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0018534	Twistnb	99	74.848	ENSSBOG00000023188	TWISTNB	99	74.260	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0018534	Twistnb	50	60.241	ENSSFOG00015012788	twistnb	56	57.542	Scleropages_formosus
MGP_SPRETEiJ_G0018534	Twistnb	91	41.796	ENSSMAG00000012792	twistnb	78	46.735	Scophthalmus_maximus
MGP_SPRETEiJ_G0018534	Twistnb	91	50.482	ENSSPUG00000007595	TWISTNB	93	49.320	Sphenodon_punctatus
MGP_SPRETEiJ_G0018534	Twistnb	100	74.251	ENSSSCG00000025298	TWISTNB	99	72.997	Sus_scrofa
MGP_SPRETEiJ_G0018534	Twistnb	93	42.724	ENSTNIG00000017778	twistnb	65	50.467	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0018534	Twistnb	100	75.224	ENSTBEG00000003554	TWISTNB	98	75.224	Tupaia_belangeri
MGP_SPRETEiJ_G0018534	Twistnb	100	75.821	ENSUAMG00000017593	TWISTNB	99	75.224	Ursus_americanus
MGP_SPRETEiJ_G0018534	Twistnb	100	75.821	ENSUMAG00000022203	TWISTNB	99	75.224	Ursus_maritimus
MGP_SPRETEiJ_G0018534	Twistnb	100	71.345	ENSVVUG00000008386	TWISTNB	99	73.392	Vulpes_vulpes
MGP_SPRETEiJ_G0018534	Twistnb	57	58.511	ENSXCOG00000020199	twistnb	51	58.511	Xiphophorus_couchianus