EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0018669 (Gene tree)
Gene ID: -
Gene Symbol: Arid4a
Alias: A630067N03Rik|Rbbp1
Full Name: AT rich interactive domain 4A (RBP1-like)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 71210 bases
Position: chr12:64055693-64126902
Accession: 2444354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0033974	Tudor-knot	PF11717.8	4.6e-13	1	1
MGP_SPRETEiJ_P0033971	Tudor-knot	PF11717.8	9.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0033973	-	1320	-	MGP_SPRETEiJ_P0033973	295 (aa)	-	-
MGP_SPRETEiJ_T0033972	-	1639	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0033971	-	5013	-	MGP_SPRETEiJ_P0033971	1261 (aa)	-	-
MGP_SPRETEiJ_T0033974	-	1887	-	MGP_SPRETEiJ_P0033974	531 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0018669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0018669's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0018669	Arid4a	100	85.194	ENSG00000032219	ARID4A	100	100.000	Homo_sapiens
MGP_SPRETEiJ_G0018669	Arid4a	99	83.685	ENSAMEG00000002532	ARID4A	99	83.685	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0018669	Arid4a	75	51.347	ENSACIG00000021943	-	75	50.946	Amphilophus_citrinellus
MGP_SPRETEiJ_G0018669	Arid4a	68	66.110	ENSAOCG00000004790	arid4a	89	44.593	Amphiprion_ocellaris
MGP_SPRETEiJ_G0018669	Arid4a	86	57.240	ENSATEG00000014386	arid4a	72	57.895	Anabas_testudineus
MGP_SPRETEiJ_G0018669	Arid4a	99	71.005	ENSAPLG00000006185	ARID4A	100	71.495	Anas_platyrhynchos
MGP_SPRETEiJ_G0018669	Arid4a	100	66.208	ENSACAG00000014637	ARID4A	99	66.616	Anolis_carolinensis
MGP_SPRETEiJ_G0018669	Arid4a	100	84.402	ENSANAG00000037559	ARID4A	100	84.402	Aotus_nancymaae
MGP_SPRETEiJ_G0018669	Arid4a	82	54.232	ENSACLG00000005837	arid4a	85	53.323	Astatotilapia_calliptera
MGP_SPRETEiJ_G0018669	Arid4a	71	68.750	ENSAMXG00000000379	arid4a	98	50.758	Astyanax_mexicanus
MGP_SPRETEiJ_G0018669	Arid4a	100	84.755	ENSBTAG00000018898	ARID4A	100	84.755	Bos_taurus
MGP_SPRETEiJ_G0018669	Arid4a	100	84.640	ENSCJAG00000018764	ARID4A	100	84.640	Callithrix_jacchus
MGP_SPRETEiJ_G0018669	Arid4a	100	85.352	ENSCAFG00000023936	ARID4A	100	85.352	Canis_familiaris
MGP_SPRETEiJ_G0018669	Arid4a	100	85.194	ENSCAFG00020008690	ARID4A	99	85.194	Canis_lupus_dingo
MGP_SPRETEiJ_G0018669	Arid4a	99	82.742	ENSCHIG00000021589	ARID4A	100	82.742	Capra_hircus
MGP_SPRETEiJ_G0018669	Arid4a	99	83.981	ENSTSYG00000013397	ARID4A	99	83.664	Carlito_syrichta
MGP_SPRETEiJ_G0018669	Arid4a	79	78.147	ENSCAPG00000008719	-	100	77.672	Cavia_aperea
MGP_SPRETEiJ_G0018669	Arid4a	94	71.142	ENSCPOG00000032725	-	98	70.741	Cavia_porcellus
MGP_SPRETEiJ_G0018669	Arid4a	99	79.658	ENSCCAG00000019639	ARID4A	98	81.646	Cebus_capucinus
MGP_SPRETEiJ_G0018669	Arid4a	100	85.273	ENSCATG00000041635	ARID4A	100	85.194	Cercocebus_atys
MGP_SPRETEiJ_G0018669	Arid4a	99	71.805	ENSCLAG00000003914	-	99	71.429	Chinchilla_lanigera
MGP_SPRETEiJ_G0018669	Arid4a	99	80.755	ENSCSAG00000014425	ARID4A	98	83.333	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0018669	Arid4a	99	79.658	ENSCHOG00000003408	ARID4A	94	77.074	Choloepus_hoffmanni
MGP_SPRETEiJ_G0018669	Arid4a	100	73.223	ENSCPBG00000024815	ARID4A	100	73.539	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0018669	Arid4a	100	84.877	ENSCANG00000034778	ARID4A	100	84.877	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0018669	Arid4a	100	88.273	ENSCGRG00001018168	Arid4a	100	88.193	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0018669	Arid4a	100	84.557	ENSCGRG00000005293	Arid4a	96	87.644	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0018669	Arid4a	85	57.613	ENSCSEG00000011930	arid4a	73	57.420	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0018669	Arid4a	100	83.281	ENSDNOG00000004090	ARID4A	100	83.043	Dasypus_novemcinctus
MGP_SPRETEiJ_G0018669	Arid4a	100	78.560	ENSDORG00000002170	Arid4a	100	78.481	Dipodomys_ordii
MGP_SPRETEiJ_G0018669	Arid4a	82	98.039	ENSETEG00000014494	ARID4A	92	81.941	Echinops_telfairi
MGP_SPRETEiJ_G0018669	Arid4a	100	84.956	ENSEASG00005016222	ARID4A	99	84.956	Equus_asinus_asinus
MGP_SPRETEiJ_G0018669	Arid4a	100	84.956	ENSECAG00000019256	ARID4A	100	84.956	Equus_caballus
MGP_SPRETEiJ_G0018669	Arid4a	100	74.051	ENSEEUG00000001510	ARID4A	100	74.051	Erinaceus_europaeus
MGP_SPRETEiJ_G0018669	Arid4a	71	66.667	ENSELUG00000003087	arid4a	86	60.589	Esox_lucius
MGP_SPRETEiJ_G0018669	Arid4a	100	84.640	ENSFCAG00000019223	ARID4A	100	84.640	Felis_catus
MGP_SPRETEiJ_G0018669	Arid4a	100	71.340	ENSFALG00000003561	ARID4A	100	71.495	Ficedula_albicollis
MGP_SPRETEiJ_G0018669	Arid4a	86	88.235	ENSFDAG00000005958	-	100	88.235	Fukomys_damarensis
MGP_SPRETEiJ_G0018669	Arid4a	70	69.194	ENSFHEG00000004741	arid4a	86	55.135	Fundulus_heteroclitus
MGP_SPRETEiJ_G0018669	Arid4a	100	72.433	ENSGALG00000012037	ARID4A	100	73.302	Gallus_gallus
MGP_SPRETEiJ_G0018669	Arid4a	100	47.348	ENSGACG00000004018	arid4a	100	47.652	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0018669	Arid4a	100	72.670	ENSGAGG00000012085	ARID4A	100	72.986	Gopherus_agassizii
MGP_SPRETEiJ_G0018669	Arid4a	100	85.036	ENSGGOG00000027092	ARID4A	100	85.036	Gorilla_gorilla
MGP_SPRETEiJ_G0018669	Arid4a	99	75.940	ENSHGLG00000001903	-	99	75.564	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0018669	Arid4a	99	75.000	ENSHGLG00100005885	-	99	74.624	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0018669	Arid4a	71	53.708	ENSIPUG00000001971	arid4a	95	52.071	Ictalurus_punctatus
MGP_SPRETEiJ_G0018669	Arid4a	100	85.669	ENSSTOG00000019680	ARID4A	100	85.669	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0018669	Arid4a	95	89.840	ENSJJAG00000016742	Arid4a	100	89.840	Jaculus_jaculus
MGP_SPRETEiJ_G0018669	Arid4a	57	67.849	ENSKMAG00000018271	arid4a	73	55.053	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0018669	Arid4a	71	51.538	ENSLBEG00000018330	arid4a	93	43.540	Labrus_bergylta
MGP_SPRETEiJ_G0018669	Arid4a	100	84.469	ENSLAFG00000008653	ARID4A	99	84.469	Loxodonta_africana
MGP_SPRETEiJ_G0018669	Arid4a	100	85.036	ENSMFAG00000037044	ARID4A	100	84.956	Macaca_fascicularis
MGP_SPRETEiJ_G0018669	Arid4a	100	85.115	ENSMMUG00000003514	ARID4A	100	85.036	Macaca_mulatta
MGP_SPRETEiJ_G0018669	Arid4a	100	85.115	ENSMNEG00000037476	ARID4A	100	85.036	Macaca_nemestrina
MGP_SPRETEiJ_G0018669	Arid4a	100	85.194	ENSMLEG00000043095	ARID4A	100	85.115	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0018669	Arid4a	55	53.786	ENSMAMG00000006769	arid4a	71	52.252	Mastacembelus_armatus
MGP_SPRETEiJ_G0018669	Arid4a	82	54.232	ENSMZEG00005017186	arid4a	85	53.323	Maylandia_zebra
MGP_SPRETEiJ_G0018669	Arid4a	100	71.773	ENSMGAG00000013615	ARID4A	100	72.572	Meleagris_gallopavo
MGP_SPRETEiJ_G0018669	Arid4a	100	79.473	ENSMAUG00000016160	Arid4a	97	79.617	Mesocricetus_auratus
MGP_SPRETEiJ_G0018669	Arid4a	100	85.658	ENSMICG00000011761	ARID4A	100	85.658	Microcebus_murinus
MGP_SPRETEiJ_G0018669	Arid4a	100	87.005	ENSMOCG00000010098	Arid4a	100	86.767	Microtus_ochrogaster
MGP_SPRETEiJ_G0018669	Arid4a	52	78.205	ENSMMOG00000020283	arid4a	83	71.801	Mola_mola
MGP_SPRETEiJ_G0018669	Arid4a	100	74.747	ENSMODG00000007881	ARID4A	100	74.747	Monodelphis_domestica
MGP_SPRETEiJ_G0018669	Arid4a	73	47.236	ENSMALG00000019138	arid4a	54	55.927	Monopterus_albus
MGP_SPRETEiJ_G0018669	Arid4a	100	98.414	MGP_CAROLIEiJ_G0017824	Arid4a	100	98.414	Mus_caroli
MGP_SPRETEiJ_G0018669	Arid4a	100	99.207	ENSMUSG00000048118	Arid4a	100	99.207	Mus_musculus
MGP_SPRETEiJ_G0018669	Arid4a	100	96.511	MGP_PahariEiJ_G0029580	Arid4a	100	96.511	Mus_pahari
MGP_SPRETEiJ_G0018669	Arid4a	100	85.115	ENSMPUG00000006137	ARID4A	100	85.115	Mustela_putorius_furo
MGP_SPRETEiJ_G0018669	Arid4a	99	83.697	ENSMLUG00000012354	ARID4A	99	83.697	Myotis_lucifugus
MGP_SPRETEiJ_G0018669	Arid4a	100	82.163	ENSNGAG00000015701	Arid4a	99	82.084	Nannospalax_galili
MGP_SPRETEiJ_G0018669	Arid4a	100	84.719	ENSNLEG00000013149	ARID4A	100	84.719	Nomascus_leucogenys
MGP_SPRETEiJ_G0018669	Arid4a	99	75.655	ENSOPRG00000002859	ARID4A	71	87.879	Ochotona_princeps
MGP_SPRETEiJ_G0018669	Arid4a	99	71.429	ENSODEG00000014309	-	99	71.617	Octodon_degus
MGP_SPRETEiJ_G0018669	Arid4a	99	64.850	ENSOANG00000011836	ARID4A	99	69.866	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0018669	Arid4a	100	82.819	ENSOCUG00000001052	ARID4A	100	82.819	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0018669	Arid4a	66	67.548	ENSORLG00020001443	arid4a	71	84.483	Oryzias_latipes_hni
MGP_SPRETEiJ_G0018669	Arid4a	100	83.333	ENSOGAG00000000385	ARID4A	100	83.333	Otolemur_garnettii
MGP_SPRETEiJ_G0018669	Arid4a	100	84.016	ENSOARG00000021110	ARID4A	100	84.016	Ovis_aries
MGP_SPRETEiJ_G0018669	Arid4a	100	85.115	ENSPPAG00000042713	ARID4A	100	85.115	Pan_paniscus
MGP_SPRETEiJ_G0018669	Arid4a	100	84.561	ENSPPRG00000009142	ARID4A	100	84.561	Panthera_pardus
MGP_SPRETEiJ_G0018669	Arid4a	100	84.640	ENSPTIG00000007597	ARID4A	100	84.640	Panthera_tigris_altaica
MGP_SPRETEiJ_G0018669	Arid4a	100	85.115	ENSPTRG00000006393	ARID4A	100	85.115	Pan_troglodytes
MGP_SPRETEiJ_G0018669	Arid4a	100	85.273	ENSPANG00000022390	ARID4A	100	85.194	Papio_anubis
MGP_SPRETEiJ_G0018669	Arid4a	68	75.131	ENSPKIG00000015415	arid4a	82	75.131	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0018669	Arid4a	99	71.572	ENSPSIG00000014845	ARID4A	100	71.594	Pelodiscus_sinensis
MGP_SPRETEiJ_G0018669	Arid4a	57	46.726	ENSPMGG00000004133	-	56	55.140	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0018669	Arid4a	100	87.480	ENSPEMG00000008231	Arid4a	100	87.639	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0018669	Arid4a	95	73.219	ENSPCIG00000017482	ARID4A	98	72.727	Phascolarctos_cinereus
MGP_SPRETEiJ_G0018669	Arid4a	100	85.273	ENSPPYG00000005857	ARID4A	100	85.273	Pongo_abelii
MGP_SPRETEiJ_G0018669	Arid4a	89	91.444	ENSPCAG00000002099	ARID4A	89	91.444	Procavia_capensis
MGP_SPRETEiJ_G0018669	Arid4a	100	85.511	ENSPCOG00000013924	ARID4A	100	85.511	Propithecus_coquereli
MGP_SPRETEiJ_G0018669	Arid4a	100	84.165	ENSPVAG00000003866	ARID4A	100	84.165	Pteropus_vampyrus
MGP_SPRETEiJ_G0018669	Arid4a	82	54.232	ENSPNYG00000009221	arid4a	83	53.870	Pundamilia_nyererei
MGP_SPRETEiJ_G0018669	Arid4a	100	91.356	ENSRNOG00000026239	Arid4a	100	91.673	Rattus_norvegicus
MGP_SPRETEiJ_G0018669	Arid4a	100	84.731	ENSRBIG00000032944	ARID4A	99	84.731	Rhinopithecus_bieti
MGP_SPRETEiJ_G0018669	Arid4a	100	85.273	ENSRROG00000034002	ARID4A	100	85.273	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0018669	Arid4a	100	84.402	ENSSBOG00000027453	ARID4A	100	84.402	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0018669	Arid4a	99	75.851	ENSSHAG00000018032	ARID4A	99	75.851	Sarcophilus_harrisii
MGP_SPRETEiJ_G0018669	Arid4a	72	53.695	ENSSFOG00015019230	arid4a	100	53.157	Scleropages_formosus
MGP_SPRETEiJ_G0018669	Arid4a	71	49.871	ENSSMAG00000012268	arid4a	61	56.303	Scophthalmus_maximus
MGP_SPRETEiJ_G0018669	Arid4a	63	54.508	ENSSDUG00000000343	arid4a	73	50.315	Seriola_dumerili
MGP_SPRETEiJ_G0018669	Arid4a	73	49.626	ENSSLDG00000022684	arid4a	94	41.442	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0018669	Arid4a	99	82.964	ENSSARG00000006966	ARID4A	100	82.964	Sorex_araneus
MGP_SPRETEiJ_G0018669	Arid4a	99	70.644	ENSSPUG00000018360	ARID4A	100	70.667	Sphenodon_punctatus
MGP_SPRETEiJ_G0018669	Arid4a	100	83.411	ENSSSCG00000005073	ARID4A	100	83.411	Sus_scrofa
MGP_SPRETEiJ_G0018669	Arid4a	79	67.647	ENSTGUG00000013032	-	100	74.084	Taeniopygia_guttata
MGP_SPRETEiJ_G0018669	Arid4a	81	57.263	ENSTRUG00000008557	arid4a	78	56.389	Takifugu_rubripes
MGP_SPRETEiJ_G0018669	Arid4a	76	58.157	ENSTNIG00000002593	arid4a	74	57.960	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0018669	Arid4a	99	75.472	ENSTBEG00000017302	ARID4A	82	80.616	Tupaia_belangeri
MGP_SPRETEiJ_G0018669	Arid4a	100	83.373	ENSUAMG00000007706	ARID4A	99	83.373	Ursus_americanus
MGP_SPRETEiJ_G0018669	Arid4a	100	84.165	ENSUMAG00000016791	ARID4A	99	84.165	Ursus_maritimus
MGP_SPRETEiJ_G0018669	Arid4a	93	84.339	ENSVPAG00000003645	ARID4A	93	84.339	Vicugna_pacos
MGP_SPRETEiJ_G0018669	Arid4a	100	85.115	ENSVVUG00000029542	ARID4A	100	85.115	Vulpes_vulpes
MGP_SPRETEiJ_G0018669	Arid4a	100	57.963	ENSXETG00000011968	arid4a	98	68.536	Xenopus_tropicalis