EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0018766 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 142003 bases
Position: chr12:77336919-77478921
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0034263	RRM_1	PF00076.22	1.5e-09	1	1
MGP_SPRETEiJ_P0034261	RRM_1	PF00076.22	6.7e-09	1	1
MGP_SPRETEiJ_P0034259	RRM_1	PF00076.22	8.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0034259	-	1925	-	MGP_SPRETEiJ_P0034259	585 (aa)	-	UPI00033352BE
MGP_SPRETEiJ_T0034276	-	623	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0034268	-	2993	-	MGP_SPRETEiJ_P0034268	163 (aa)	-	-
MGP_SPRETEiJ_T0034269	-	4678	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0034266	-	4389	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0034267	-	576	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0034264	-	548	-	MGP_SPRETEiJ_P0034264	37 (aa)	-	UPI00033353D0
MGP_SPRETEiJ_T0034265	-	1116	-	MGP_SPRETEiJ_P0034265	194 (aa)	-	-
MGP_SPRETEiJ_T0034262	-	608	-	MGP_SPRETEiJ_P0034262	102 (aa)	-	UPI00033353DA
MGP_SPRETEiJ_T0034263	-	788	-	MGP_SPRETEiJ_P0034263	194 (aa)	-	UPI0003335335
MGP_SPRETEiJ_T0034260	-	485	-	MGP_SPRETEiJ_P0034260	84 (aa)	-	UPI00033352A5
MGP_SPRETEiJ_T0034261	-	765	-	MGP_SPRETEiJ_P0034261	174 (aa)	-	UPI0003335242
MGP_SPRETEiJ_T0034275	-	518	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0034270	-	444	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0034273	-	279	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0034274	-	3430	-	MGP_SPRETEiJ_P0034274	551 (aa)	-	-
MGP_SPRETEiJ_T0034272	-	1027	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0034271	-	3768	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0018766's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0018766's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSG00000119707	RBM25	100	99.213	Homo_sapiens
MGP_SPRETEiJ_G0018766	-	94	74.457	ENSAPOG00000017757	rbm25a	54	76.794	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSAMEG00000016270	RBM25	70	98.983	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0018766	-	93	73.626	ENSAOCG00000019308	rbm25b	53	76.202	Amphiprion_ocellaris
MGP_SPRETEiJ_G0018766	-	94	74.457	ENSAOCG00000013695	rbm25a	59	70.807	Amphiprion_ocellaris
MGP_SPRETEiJ_G0018766	-	93	73.626	ENSAPEG00000009666	rbm25b	53	75.787	Amphiprion_percula
MGP_SPRETEiJ_G0018766	-	94	74.457	ENSAPEG00000007514	rbm25a	53	77.831	Amphiprion_percula
MGP_SPRETEiJ_G0018766	-	95	70.968	ENSATEG00000017312	rbm25b	55	77.966	Anabas_testudineus
MGP_SPRETEiJ_G0018766	-	99	96.014	ENSAPLG00000006643	RBM25	70	96.014	Anas_platyrhynchos
MGP_SPRETEiJ_G0018766	-	99	96.364	ENSACAG00000016239	RBM25	65	96.364	Anolis_carolinensis
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSANAG00000028295	RBM25	99	98.966	Aotus_nancymaae
MGP_SPRETEiJ_G0018766	-	78	85.714	ENSACLG00000027482	rbm25a	53	78.554	Astatotilapia_calliptera
MGP_SPRETEiJ_G0018766	-	99	86.525	ENSAMXG00000024525	rbm25b	53	72.603	Astyanax_mexicanus
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSBTAG00000017177	RBM25	70	98.983	Bos_taurus
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSCJAG00000014441	-	99	98.966	Callithrix_jacchus
MGP_SPRETEiJ_G0018766	-	64	95.798	ENSCJAG00000046744	-	100	95.798	Callithrix_jacchus
MGP_SPRETEiJ_G0018766	-	80	98.726	ENSCAFG00000016809	-	98	98.544	Canis_familiaris
MGP_SPRETEiJ_G0018766	-	64	99.435	ENSCHIG00000021190	-	100	99.365	Capra_hircus
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSTSYG00000003024	RBM25	99	98.966	Carlito_syrichta
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSCPOG00000002479	RBM25	70	98.814	Cavia_porcellus
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSCATG00000039651	RBM25	99	98.966	Cercocebus_atys
MGP_SPRETEiJ_G0018766	-	100	98.851	ENSCLAG00000003977	RBM25	70	98.644	Chinchilla_lanigera
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSCSAG00000012801	RBM25	70	98.983	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0018766	-	100	98.462	ENSCANG00000043874	RBM25	99	98.621	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSCGRG00001020817	Rbm25	65	89.636	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0018766	-	100	99.659	ENSCGRG00000017595	Rbm25	70	99.659	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0018766	-	96	71.123	ENSCSEG00000020737	rbm25b	52	73.913	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0018766	-	68	86.260	ENSCVAG00000005498	rbm25a	99	75.138	Cyprinodon_variegatus
MGP_SPRETEiJ_G0018766	-	91	65.193	ENSDARG00000039266	rbm25a	98	94.872	Danio_rerio
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSDNOG00000004959	RBM25	70	98.983	Dasypus_novemcinctus
MGP_SPRETEiJ_G0018766	-	100	95.254	ENSDORG00000013247	Rbm25	67	98.736	Dipodomys_ordii
MGP_SPRETEiJ_G0018766	-	99	97.464	ENSETEG00000015941	RBM25	72	95.904	Echinops_telfairi
MGP_SPRETEiJ_G0018766	-	57	99.365	ENSEASG00005004743	-	100	99.365	Equus_asinus_asinus
MGP_SPRETEiJ_G0018766	-	57	99.365	ENSECAG00000013395	RBM25	100	99.365	Equus_caballus
MGP_SPRETEiJ_G0018766	-	100	97.949	ENSEEUG00000007350	RBM25	70	87.648	Erinaceus_europaeus
MGP_SPRETEiJ_G0018766	-	96	70.745	ENSELUG00000007730	rbm25b	52	80.321	Esox_lucius
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSFCAG00000011716	RBM25	99	98.966	Felis_catus
MGP_SPRETEiJ_G0018766	-	100	96.944	ENSFALG00000005445	RBM25	70	96.944	Ficedula_albicollis
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSFDAG00000006542	RBM25	70	98.814	Fukomys_damarensis
MGP_SPRETEiJ_G0018766	-	93	76.374	ENSFHEG00000005318	rbm25a	50	70.433	Fundulus_heteroclitus
MGP_SPRETEiJ_G0018766	-	63	86.614	ENSGMOG00000014070	rbm25a	56	72.684	Gadus_morhua
MGP_SPRETEiJ_G0018766	-	88	80.714	ENSGMOG00000014097	rbm25b	56	66.505	Gadus_morhua
MGP_SPRETEiJ_G0018766	-	100	94.898	ENSGALG00000047486	-	62	89.619	Gallus_gallus
MGP_SPRETEiJ_G0018766	-	64	96.045	ENSGALG00000009332	-	99	96.045	Gallus_gallus
MGP_SPRETEiJ_G0018766	-	93	73.262	ENSGAFG00000001092	rbm25b	50	72.639	Gambusia_affinis
MGP_SPRETEiJ_G0018766	-	99	74.872	ENSGAFG00000018036	rbm25a	52	77.273	Gambusia_affinis
MGP_SPRETEiJ_G0018766	-	91	91.450	ENSGAGG00000024524	RBM25	50	91.111	Gopherus_agassizii
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSGGOG00000002415	RBM25	99	98.966	Gorilla_gorilla
MGP_SPRETEiJ_G0018766	-	92	72.626	ENSHBUG00000016908	rbm25a	51	78.554	Haplochromis_burtoni
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSHGLG00000014745	RBM25	70	98.814	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSHGLG00100018236	-	100	98.974	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0018766	-	99	67.526	ENSHCOG00000000142	rbm25b	52	75.980	Hippocampus_comes
MGP_SPRETEiJ_G0018766	-	93	66.848	ENSIPUG00000021051	rbm25b	59	72.464	Ictalurus_punctatus
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSSTOG00000011117	RBM25	70	98.983	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0018766	-	98	68.229	ENSKMAG00000016242	rbm25a	54	76.867	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0018766	-	94	70.652	ENSKMAG00000018826	rbm25b	52	74.334	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0018766	-	94	73.370	ENSLBEG00000010667	rbm25b	52	77.240	Labrus_bergylta
MGP_SPRETEiJ_G0018766	-	95	87.097	ENSLACG00000011845	RBM25	50	91.133	Latimeria_chalumnae
MGP_SPRETEiJ_G0018766	-	95	84.946	ENSLOCG00000014196	rbm25b	51	84.541	Lepisosteus_oculatus
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSMFAG00000040040	RBM25	99	98.966	Macaca_fascicularis
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSMMUG00000002332	RBM25	100	99.365	Macaca_mulatta
MGP_SPRETEiJ_G0018766	-	100	95.593	ENSMNEG00000032922	RBM25	67	98.917	Macaca_nemestrina
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSMLEG00000035157	RBM25	99	98.966	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0018766	-	92	66.667	ENSMAMG00000000165	rbm25a	61	71.308	Mastacembelus_armatus
MGP_SPRETEiJ_G0018766	-	94	74.863	ENSMAMG00000004524	rbm25b	52	74.818	Mastacembelus_armatus
MGP_SPRETEiJ_G0018766	-	93	73.077	ENSMZEG00005011183	rbm25a	54	78.554	Maylandia_zebra
MGP_SPRETEiJ_G0018766	-	62	98.542	ENSMAUG00000017751	-	92	98.542	Mesocricetus_auratus
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSMICG00000034082	RBM25	99	98.966	Microcebus_murinus
MGP_SPRETEiJ_G0018766	-	99	99.275	ENSMOCG00000001935	Rbm25	67	99.275	Microtus_ochrogaster
MGP_SPRETEiJ_G0018766	-	95	86.232	ENSMMOG00000015545	rbm25b	53	85.211	Mola_mola
MGP_SPRETEiJ_G0018766	-	78	84.884	ENSMMOG00000009065	rbm25a	53	77.938	Mola_mola
MGP_SPRETEiJ_G0018766	-	100	96.410	ENSMODG00000006820	RBM25	69	98.299	Monodelphis_domestica
MGP_SPRETEiJ_G0018766	-	64	73.779	ENSMALG00000020459	rbm25a	55	79.668	Monopterus_albus
MGP_SPRETEiJ_G0018766	-	100	100.000	MGP_CAROLIEiJ_G0017921	Rbm25	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0018766	-	100	100.000	ENSMUSG00000010608	Rbm25	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0018766	-	100	100.000	MGP_PahariEiJ_G0029677	Rbm25	100	100.000	Mus_pahari
MGP_SPRETEiJ_G0018766	-	85	97.234	ENSMPUG00000003698	RBM25	74	98.917	Mustela_putorius_furo
MGP_SPRETEiJ_G0018766	-	100	99.489	ENSNGAG00000018465	Rbm25	70	99.489	Nannospalax_galili
MGP_SPRETEiJ_G0018766	-	92	72.626	ENSNBRG00000003761	rbm25a	52	82.222	Neolamprologus_brichardi
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSNLEG00000002701	RBM25	99	98.966	Nomascus_leucogenys
MGP_SPRETEiJ_G0018766	-	99	97.834	ENSOANG00000001056	RBM25	69	96.102	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0018766	-	100	97.949	ENSOCUG00000013737	RBM25	70	98.644	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0018766	-	65	74.803	ENSORLG00000024690	-	98	74.803	Oryzias_latipes
MGP_SPRETEiJ_G0018766	-	64	77.869	ENSORLG00000009958	rbm25a	99	76.177	Oryzias_latipes
MGP_SPRETEiJ_G0018766	-	98	71.354	ENSORLG00020016422	rbm25b	51	75.545	Oryzias_latipes_hni
MGP_SPRETEiJ_G0018766	-	93	75.824	ENSORLG00015022499	rbm25a	56	81.343	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0018766	-	93	76.923	ENSOMEG00000022138	rbm25a	52	80.833	Oryzias_melastigma
MGP_SPRETEiJ_G0018766	-	99	97.645	ENSOGAG00000014986	RBM25	66	97.645	Otolemur_garnettii
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSOARG00000000319	RBM25	70	98.983	Ovis_aries
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSPPAG00000039402	RBM25	99	98.966	Pan_paniscus
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSPPRG00000017374	RBM25	99	98.966	Panthera_pardus
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSPTIG00000017309	RBM25	99	98.966	Panthera_tigris_altaica
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSPTRG00000006509	RBM25	99	98.966	Pan_troglodytes
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSPANG00000018212	RBM25	99	98.966	Papio_anubis
MGP_SPRETEiJ_G0018766	-	95	82.258	ENSPKIG00000003203	rbm25b	54	79.271	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0018766	-	100	97.274	ENSPSIG00000006058	RBM25	70	97.274	Pelodiscus_sinensis
MGP_SPRETEiJ_G0018766	-	71	67.830	ENSPMGG00000001791	rbm25a	100	66.748	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0018766	-	57	99.683	ENSPEMG00000008001	-	100	99.683	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0018766	-	94	93.273	ENSPCIG00000011166	RBM25	70	93.273	Phascolarctos_cinereus
MGP_SPRETEiJ_G0018766	-	99	73.469	ENSPLAG00000018338	rbm25a	52	78.365	Poecilia_latipinna
MGP_SPRETEiJ_G0018766	-	57	72.446	ENSPLAG00000000100	rbm25b	100	74.923	Poecilia_latipinna
MGP_SPRETEiJ_G0018766	-	99	73.469	ENSPMEG00000024470	rbm25a	52	78.365	Poecilia_mexicana
MGP_SPRETEiJ_G0018766	-	94	74.457	ENSPMEG00000019161	rbm25b	50	72.947	Poecilia_mexicana
MGP_SPRETEiJ_G0018766	-	64	71.930	ENSPMEG00000012262	rbm25b	100	75.232	Poecilia_mexicana
MGP_SPRETEiJ_G0018766	-	99	73.980	ENSPREG00000009228	rbm25a	58	70.868	Poecilia_reticulata
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSPCAG00000006226	RBM25	54	99.561	Procavia_capensis
MGP_SPRETEiJ_G0018766	-	100	98.462	ENSPCOG00000023107	RBM25	99	98.621	Propithecus_coquereli
MGP_SPRETEiJ_G0018766	-	100	84.615	ENSPVAG00000003931	RBM25	66	98.917	Pteropus_vampyrus
MGP_SPRETEiJ_G0018766	-	94	66.304	ENSPNYG00000022596	rbm25a	52	78.554	Pundamilia_nyererei
MGP_SPRETEiJ_G0018766	-	94	81.622	ENSPNAG00000012024	rbm25b	53	74.771	Pygocentrus_nattereri
MGP_SPRETEiJ_G0018766	-	100	100.000	ENSRNOG00000002871	Rbm25l1	69	95.904	Rattus_norvegicus
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSRBIG00000039904	RBM25	99	98.966	Rhinopithecus_bieti
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSRROG00000035556	RBM25	99	98.966	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0018766	-	100	96.410	ENSSHAG00000012859	RBM25	70	97.800	Sarcophilus_harrisii
MGP_SPRETEiJ_G0018766	-	94	70.109	ENSSMAG00000002520	rbm25b	55	62.361	Scophthalmus_maximus
MGP_SPRETEiJ_G0018766	-	100	98.462	ENSSARG00000002327	RBM25	70	98.814	Sorex_araneus
MGP_SPRETEiJ_G0018766	-	99	94.330	ENSSPUG00000000970	-	99	88.660	Sphenodon_punctatus
MGP_SPRETEiJ_G0018766	-	64	92.676	ENSSPUG00000000999	-	99	92.593	Sphenodon_punctatus
MGP_SPRETEiJ_G0018766	-	94	75.543	ENSSPAG00000016168	rbm25b	51	75.787	Stegastes_partitus
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSSSCG00000039876	RBM25	100	98.833	Sus_scrofa
MGP_SPRETEiJ_G0018766	-	99	96.752	ENSTGUG00000011246	-	70	96.752	Taeniopygia_guttata
MGP_SPRETEiJ_G0018766	-	94	73.224	ENSTRUG00000017964	rbm25b	55	73.227	Takifugu_rubripes
MGP_SPRETEiJ_G0018766	-	64	74.247	ENSTNIG00000004673	rbm25a	99	73.003	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0018766	-	84	72.246	ENSTNIG00000012222	rbm25b	74	67.532	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0018766	-	80	98.726	ENSUAMG00000007707	RBM25	100	99.365	Ursus_americanus
MGP_SPRETEiJ_G0018766	-	100	94.872	ENSVPAG00000009052	RBM25	66	98.736	Vicugna_pacos
MGP_SPRETEiJ_G0018766	-	100	98.974	ENSVVUG00000004426	RBM25	68	98.983	Vulpes_vulpes
MGP_SPRETEiJ_G0018766	-	86	82.809	ENSXETG00000021857	rbm25	53	87.654	Xenopus_tropicalis
MGP_SPRETEiJ_G0018766	-	98	73.469	ENSXCOG00000004043	RBM25	53	78.469	Xiphophorus_couchianus
MGP_SPRETEiJ_G0018766	-	93	75.824	ENSXCOG00000002222	rbm25b	52	72.705	Xiphophorus_couchianus
MGP_SPRETEiJ_G0018766	-	95	74.194	ENSXMAG00000017290	rbm25b	52	72.488	Xiphophorus_maculatus
MGP_SPRETEiJ_G0018766	-	99	73.196	ENSXMAG00000009077	RBM25	51	74.402	Xiphophorus_maculatus