EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0018857 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 42464 bases
Position: chr12:92715640-92758103
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0034587	zf-CCCH_2	PF14608.6	1.6e-14	1	4
MGP_SPRETEiJ_P0034587	zf-CCCH_2	PF14608.6	1.6e-14	2	4
MGP_SPRETEiJ_P0034587	zf-CCCH_2	PF14608.6	1.6e-14	3	4
MGP_SPRETEiJ_P0034587	zf-CCCH_2	PF14608.6	1.6e-14	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0034587	-	4924	-	MGP_SPRETEiJ_P0034587	1513 (aa)	-	-
MGP_SPRETEiJ_T0034588	-	1020	-	MGP_SPRETEiJ_P0034588	291 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0018857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0018857's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0018857	-	84	90.110	ENSG00000100722	ZC3H14	100	100.000	Homo_sapiens
MGP_SPRETEiJ_G0018857	-	83	57.225	ENSAPOG00000001640	zc3h14	96	66.197	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0018857	-	84	87.293	ENSAMEG00000001478	ZC3H14	99	87.293	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0018857	-	59	60.897	ENSACIG00000003703	zc3h14	93	60.897	Amphilophus_citrinellus
MGP_SPRETEiJ_G0018857	-	83	57.831	ENSAOCG00000024218	zc3h14	96	66.187	Amphiprion_ocellaris
MGP_SPRETEiJ_G0018857	-	83	57.647	ENSAPEG00000001867	zc3h14	99	60.870	Amphiprion_percula
MGP_SPRETEiJ_G0018857	-	81	55.030	ENSATEG00000006018	zc3h14	98	63.043	Anabas_testudineus
MGP_SPRETEiJ_G0018857	-	82	69.216	ENSAPLG00000008694	ZC3H14	99	69.271	Anas_platyrhynchos
MGP_SPRETEiJ_G0018857	-	83	67.730	ENSACAG00000013021	ZC3H14	98	67.213	Anolis_carolinensis
MGP_SPRETEiJ_G0018857	-	84	87.435	ENSANAG00000032583	-	100	89.005	Aotus_nancymaae
MGP_SPRETEiJ_G0018857	-	50	76.316	ENSANAG00000030417	-	95	76.316	Aotus_nancymaae
MGP_SPRETEiJ_G0018857	-	82	60.123	ENSACLG00000012665	zc3h14	97	60.123	Astatotilapia_calliptera
MGP_SPRETEiJ_G0018857	-	58	60.753	ENSAMXG00000013714	zc3h14	96	56.875	Astyanax_mexicanus
MGP_SPRETEiJ_G0018857	-	84	85.688	ENSBTAG00000030453	ZC3H14	100	85.688	Bos_taurus
MGP_SPRETEiJ_G0018857	-	84	87.435	ENSCJAG00000017345	ZC3H14	100	89.005	Callithrix_jacchus
MGP_SPRETEiJ_G0018857	-	84	89.744	ENSCAFG00000017415	ZC3H14	100	89.744	Canis_familiaris
MGP_SPRETEiJ_G0018857	-	82	88.213	ENSCAFG00020016522	ZC3H14	99	88.213	Canis_lupus_dingo
MGP_SPRETEiJ_G0018857	-	54	85.256	ENSCHIG00000009115	-	91	85.256	Capra_hircus
MGP_SPRETEiJ_G0018857	-	84	87.681	ENSCHIG00000022904	ZC3H14	100	88.056	Capra_hircus
MGP_SPRETEiJ_G0018857	-	83	83.764	ENSTSYG00000010797	ZC3H14	99	84.211	Carlito_syrichta
MGP_SPRETEiJ_G0018857	-	78	84.737	ENSCAPG00000010444	ZC3H14	99	84.737	Cavia_aperea
MGP_SPRETEiJ_G0018857	-	84	87.729	ENSCPOG00000013632	ZC3H14	100	87.729	Cavia_porcellus
MGP_SPRETEiJ_G0018857	-	78	88.119	ENSCCAG00000036483	-	100	89.529	Cebus_capucinus
MGP_SPRETEiJ_G0018857	-	84	90.110	ENSCATG00000026685	ZC3H14	100	90.110	Cercocebus_atys
MGP_SPRETEiJ_G0018857	-	84	88.462	ENSCLAG00000010139	ZC3H14	100	88.462	Chinchilla_lanigera
MGP_SPRETEiJ_G0018857	-	84	89.927	ENSCSAG00000011569	ZC3H14	100	89.927	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0018857	-	83	85.955	ENSCHOG00000000279	-	100	85.955	Choloepus_hoffmanni
MGP_SPRETEiJ_G0018857	-	85	71.455	ENSCPBG00000008376	ZC3H14	100	71.455	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0018857	-	84	90.110	ENSCANG00000036833	ZC3H14	100	90.110	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0018857	-	84	95.421	ENSCGRG00001015677	Zc3h14	100	95.421	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0018857	-	81	95.183	ENSCGRG00000017688	Zc3h14	100	95.183	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0018857	-	81	48.980	ENSCSEG00000013652	zc3h14	94	48.980	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0018857	-	79	64.539	ENSCVAG00000000590	zc3h14	97	62.759	Cyprinodon_variegatus
MGP_SPRETEiJ_G0018857	-	81	64.901	ENSDARG00000041402	zc3h14	93	64.901	Danio_rerio
MGP_SPRETEiJ_G0018857	-	84	86.911	ENSDNOG00000010289	ZC3H14	100	86.911	Dasypus_novemcinctus
MGP_SPRETEiJ_G0018857	-	76	86.842	ENSDORG00000009066	Zc3h14	98	88.889	Dipodomys_ordii
MGP_SPRETEiJ_G0018857	-	83	85.340	ENSETEG00000002609	ZC3H14	100	85.340	Echinops_telfairi
MGP_SPRETEiJ_G0018857	-	84	89.560	ENSEASG00005020371	ZC3H14	100	89.560	Equus_asinus_asinus
MGP_SPRETEiJ_G0018857	-	84	89.560	ENSECAG00000013214	ZC3H14	100	89.560	Equus_caballus
MGP_SPRETEiJ_G0018857	-	82	81.481	ENSEEUG00000003200	-	100	81.481	Erinaceus_europaeus
MGP_SPRETEiJ_G0018857	-	82	56.790	ENSELUG00000005015	zc3h14	100	56.790	Esox_lucius
MGP_SPRETEiJ_G0018857	-	84	89.011	ENSFCAG00000012898	-	100	89.011	Felis_catus
MGP_SPRETEiJ_G0018857	-	84	68.750	ENSFALG00000012422	ZC3H14	100	68.229	Ficedula_albicollis
MGP_SPRETEiJ_G0018857	-	84	89.377	ENSFDAG00000009953	ZC3H14	100	89.377	Fukomys_damarensis
MGP_SPRETEiJ_G0018857	-	81	61.745	ENSFHEG00000020403	zc3h14	90	62.000	Fundulus_heteroclitus
MGP_SPRETEiJ_G0018857	-	84	69.399	ENSGALG00000010622	ZC3H14	99	69.399	Gallus_gallus
MGP_SPRETEiJ_G0018857	-	81	63.946	ENSGAFG00000002915	zc3h14	91	63.946	Gambusia_affinis
MGP_SPRETEiJ_G0018857	-	83	54.706	ENSGACG00000010599	zc3h14	94	60.274	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0018857	-	85	70.962	ENSGAGG00000005013	ZC3H14	100	70.780	Gopherus_agassizii
MGP_SPRETEiJ_G0018857	-	84	90.293	ENSGGOG00000010278	ZC3H14	99	90.293	Gorilla_gorilla
MGP_SPRETEiJ_G0018857	-	82	60.123	ENSHBUG00000012522	zc3h14	97	60.123	Haplochromis_burtoni
MGP_SPRETEiJ_G0018857	-	84	89.011	ENSHGLG00000017715	ZC3H14	100	89.011	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0018857	-	83	88.764	ENSHGLG00100014539	ZC3H14	100	88.764	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0018857	-	82	59.060	ENSHCOG00000007792	zc3h14	96	60.667	Hippocampus_comes
MGP_SPRETEiJ_G0018857	-	82	54.023	ENSIPUG00000015945	zc3h14	95	55.488	Ictalurus_punctatus
MGP_SPRETEiJ_G0018857	-	83	89.326	ENSSTOG00000013176	ZC3H14	100	89.326	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0018857	-	83	90.824	ENSJJAG00000005306	-	100	90.824	Jaculus_jaculus
MGP_SPRETEiJ_G0018857	-	75	83.684	ENSJJAG00000022340	-	96	83.158	Jaculus_jaculus
MGP_SPRETEiJ_G0018857	-	81	66.216	ENSKMAG00000013693	zc3h14	99	66.901	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0018857	-	82	64.667	ENSLBEG00000001551	zc3h14	99	64.667	Labrus_bergylta
MGP_SPRETEiJ_G0018857	-	82	64.327	ENSLACG00000008327	ZC3H14	96	68.590	Latimeria_chalumnae
MGP_SPRETEiJ_G0018857	-	82	60.606	ENSLOCG00000010387	zc3h14	99	62.987	Lepisosteus_oculatus
MGP_SPRETEiJ_G0018857	-	84	87.435	ENSLAFG00000002998	ZC3H14	100	87.435	Loxodonta_africana
MGP_SPRETEiJ_G0018857	-	84	90.110	ENSMFAG00000032254	ZC3H14	100	90.110	Macaca_fascicularis
MGP_SPRETEiJ_G0018857	-	84	90.110	ENSMMUG00000004603	ZC3H14	100	90.110	Macaca_mulatta
MGP_SPRETEiJ_G0018857	-	84	90.110	ENSMNEG00000013027	ZC3H14	100	90.110	Macaca_nemestrina
MGP_SPRETEiJ_G0018857	-	83	89.888	ENSMLEG00000031286	ZC3H14	100	89.888	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0018857	-	83	59.064	ENSMAMG00000017380	zc3h14	100	60.870	Mastacembelus_armatus
MGP_SPRETEiJ_G0018857	-	82	60.123	ENSMZEG00005016319	zc3h14	97	60.123	Maylandia_zebra
MGP_SPRETEiJ_G0018857	-	83	68.156	ENSMGAG00000013009	ZC3H14	99	68.284	Meleagris_gallopavo
MGP_SPRETEiJ_G0018857	-	84	95.604	ENSMAUG00000022152	Zc3h14	100	95.604	Mesocricetus_auratus
MGP_SPRETEiJ_G0018857	-	84	89.418	ENSMICG00000016669	ZC3H14	99	89.418	Microcebus_murinus
MGP_SPRETEiJ_G0018857	-	84	95.963	ENSMOCG00000014022	Zc3h14	100	95.556	Microtus_ochrogaster
MGP_SPRETEiJ_G0018857	-	67	62.585	ENSMMOG00000015654	zc3h14	87	62.585	Mola_mola
MGP_SPRETEiJ_G0018857	-	85	77.920	ENSMODG00000003282	ZC3H14	100	78.010	Monodelphis_domestica
MGP_SPRETEiJ_G0018857	-	66	62.500	ENSMALG00000003067	zc3h14	99	62.500	Monopterus_albus
MGP_SPRETEiJ_G0018857	-	84	98.901	MGP_CAROLIEiJ_G0018012	Zc3h14	100	98.901	Mus_caroli
MGP_SPRETEiJ_G0018857	-	84	100.000	ENSMUSG00000021012	Zc3h14	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0018857	-	84	98.421	MGP_PahariEiJ_G0029770	Zc3h14	100	98.421	Mus_pahari
MGP_SPRETEiJ_G0018857	-	82	88.235	ENSMPUG00000008228	ZC3H14	100	88.235	Mustela_putorius_furo
MGP_SPRETEiJ_G0018857	-	84	88.300	ENSMLUG00000016321	ZC3H14	100	88.300	Myotis_lucifugus
MGP_SPRETEiJ_G0018857	-	84	93.158	ENSNGAG00000017541	Zc3h14	100	93.464	Nannospalax_galili
MGP_SPRETEiJ_G0018857	-	67	61.006	ENSNBRG00000019192	zc3h14	99	61.635	Neolamprologus_brichardi
MGP_SPRETEiJ_G0018857	-	84	88.482	ENSNLEG00000016907	ZC3H14	100	88.482	Nomascus_leucogenys
MGP_SPRETEiJ_G0018857	-	84	75.521	ENSMEUG00000010740	ZC3H14	100	76.562	Notamacropus_eugenii
MGP_SPRETEiJ_G0018857	-	84	78.010	ENSODEG00000012083	-	97	78.010	Octodon_degus
MGP_SPRETEiJ_G0018857	-	84	87.912	ENSODEG00000008995	-	100	87.912	Octodon_degus
MGP_SPRETEiJ_G0018857	-	82	60.123	ENSONIG00000015292	zc3h14	100	60.123	Oreochromis_niloticus
MGP_SPRETEiJ_G0018857	-	77	73.438	ENSOANG00000015633	-	100	72.396	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0018857	-	67	83.226	ENSOCUG00000026622	-	100	83.226	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0018857	-	80	85.340	ENSOCUG00000015503	-	100	85.340	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0018857	-	81	65.753	ENSORLG00000009049	zc3h14	94	66.438	Oryzias_latipes
MGP_SPRETEiJ_G0018857	-	81	65.753	ENSORLG00020002299	zc3h14	94	66.438	Oryzias_latipes_hni
MGP_SPRETEiJ_G0018857	-	81	65.753	ENSORLG00015017483	zc3h14	94	66.438	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0018857	-	69	64.138	ENSOMEG00000018596	zc3h14	94	63.226	Oryzias_melastigma
MGP_SPRETEiJ_G0018857	-	84	88.462	ENSOGAG00000005373	ZC3H14	100	88.462	Otolemur_garnettii
MGP_SPRETEiJ_G0018857	-	84	85.261	ENSOARG00000003198	ZC3H14	99	85.261	Ovis_aries
MGP_SPRETEiJ_G0018857	-	84	90.293	ENSPPAG00000035751	ZC3H14	100	90.293	Pan_paniscus
MGP_SPRETEiJ_G0018857	-	84	89.011	ENSPPRG00000006467	ZC3H14	100	89.011	Panthera_pardus
MGP_SPRETEiJ_G0018857	-	83	88.015	ENSPTIG00000012741	ZC3H14	99	88.015	Panthera_tigris_altaica
MGP_SPRETEiJ_G0018857	-	84	90.293	ENSPTRG00000006608	ZC3H14	100	90.293	Pan_troglodytes
MGP_SPRETEiJ_G0018857	-	84	89.560	ENSPANG00000012704	ZC3H14	100	89.560	Papio_anubis
MGP_SPRETEiJ_G0018857	-	81	63.889	ENSPKIG00000014248	zc3h14	96	63.889	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0018857	-	84	69.792	ENSPSIG00000010899	ZC3H14	99	69.792	Pelodiscus_sinensis
MGP_SPRETEiJ_G0018857	-	81	78.191	ENSPCIG00000011633	ZC3H14	99	80.795	Phascolarctos_cinereus
MGP_SPRETEiJ_G0018857	-	82	61.935	ENSPFOG00000008213	zc3h14	97	64.384	Poecilia_formosa
MGP_SPRETEiJ_G0018857	-	79	63.226	ENSPLAG00000006557	zc3h14	99	61.635	Poecilia_latipinna
MGP_SPRETEiJ_G0018857	-	82	61.290	ENSPMEG00000018330	zc3h14	97	63.699	Poecilia_mexicana
MGP_SPRETEiJ_G0018857	-	81	65.035	ENSPREG00000019413	zc3h14	98	63.265	Poecilia_reticulata
MGP_SPRETEiJ_G0018857	-	84	89.744	ENSPPYG00000006053	ZC3H14	100	89.744	Pongo_abelii
MGP_SPRETEiJ_G0018857	-	53	90.580	ENSPCAG00000009400	-	68	90.580	Procavia_capensis
MGP_SPRETEiJ_G0018857	-	77	89.529	ENSPCOG00000025591	ZC3H14	100	89.529	Propithecus_coquereli
MGP_SPRETEiJ_G0018857	-	84	88.095	ENSPVAG00000014133	ZC3H14	100	88.095	Pteropus_vampyrus
MGP_SPRETEiJ_G0018857	-	82	60.123	ENSPNYG00000007634	zc3h14	97	60.123	Pundamilia_nyererei
MGP_SPRETEiJ_G0018857	-	83	51.579	ENSPNAG00000021318	zc3h14	94	56.250	Pygocentrus_nattereri
MGP_SPRETEiJ_G0018857	-	84	96.859	ENSRNOG00000004083	Zc3h14	100	96.859	Rattus_norvegicus
MGP_SPRETEiJ_G0018857	-	84	90.110	ENSRBIG00000011607	ZC3H14	100	90.110	Rhinopithecus_bieti
MGP_SPRETEiJ_G0018857	-	84	90.110	ENSRROG00000029717	ZC3H14	100	90.110	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0018857	-	83	89.139	ENSSBOG00000017936	-	100	89.139	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0018857	-	66	77.273	ENSSBOG00000010853	-	100	79.221	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0018857	-	84	77.289	ENSSHAG00000015169	ZC3H14	99	77.509	Sarcophilus_harrisii
MGP_SPRETEiJ_G0018857	-	81	60.241	ENSSFOG00015007976	zc3h14	95	60.366	Scleropages_formosus
MGP_SPRETEiJ_G0018857	-	83	56.471	ENSSMAG00000011976	zc3h14	100	61.184	Scophthalmus_maximus
MGP_SPRETEiJ_G0018857	-	82	63.576	ENSSDUG00000015595	zc3h14	100	63.576	Seriola_dumerili
MGP_SPRETEiJ_G0018857	-	82	63.576	ENSSLDG00000001706	zc3h14	100	63.576	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0018857	-	81	83.430	ENSSARG00000014192	ZC3H14	100	83.430	Sorex_araneus
MGP_SPRETEiJ_G0018857	-	85	69.271	ENSSPUG00000012695	ZC3H14	100	68.229	Sphenodon_punctatus
MGP_SPRETEiJ_G0018857	-	84	56.044	ENSSPAG00000014475	zc3h14	99	65.986	Stegastes_partitus
MGP_SPRETEiJ_G0018857	-	84	89.927	ENSSSCG00000002426	ZC3H14	100	89.927	Sus_scrofa
MGP_SPRETEiJ_G0018857	-	84	69.312	ENSTGUG00000012417	ZC3H14	100	68.254	Taeniopygia_guttata
MGP_SPRETEiJ_G0018857	-	83	56.213	ENSTRUG00000009079	zc3h14	99	58.125	Takifugu_rubripes
MGP_SPRETEiJ_G0018857	-	81	61.438	ENSTNIG00000016348	zc3h14	94	61.438	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0018857	-	60	90.058	ENSTBEG00000000653	-	71	90.058	Tupaia_belangeri
MGP_SPRETEiJ_G0018857	-	84	86.387	ENSTTRG00000012877	ZC3H14	92	89.562	Tursiops_truncatus
MGP_SPRETEiJ_G0018857	-	84	85.263	ENSUAMG00000008799	ZC3H14	100	86.624	Ursus_americanus
MGP_SPRETEiJ_G0018857	-	80	88.086	ENSUMAG00000006669	ZC3H14	100	88.086	Ursus_maritimus
MGP_SPRETEiJ_G0018857	-	83	88.015	ENSVPAG00000005488	ZC3H14	100	88.015	Vicugna_pacos
MGP_SPRETEiJ_G0018857	-	80	89.258	ENSVVUG00000027875	ZC3H14	100	89.258	Vulpes_vulpes
MGP_SPRETEiJ_G0018857	-	83	60.674	ENSXETG00000031997	ZC3H14	96	65.000	Xenopus_tropicalis
MGP_SPRETEiJ_G0018857	-	82	61.935	ENSXMAG00000004041	zc3h14	99	61.875	Xiphophorus_maculatus