EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0018877 (Gene tree)
Gene ID: -
Gene Symbol: Cpsf2
Alias: 100kDa|2610024B04Rik|Cpsf
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 32737 bases
Position: chr12:96121938-96154674
Accession: 1861601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0034664	Beta-Casp	PF10996.8	1.6e-20	1	1
MGP_SPRETEiJ_P0034664	Lactamase_B	PF00753.27	2.1e-05	1	1
MGP_SPRETEiJ_P0034664	RMMBL	PF07521.12	2.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0034664	-	5310	-	MGP_SPRETEiJ_P0034664	782 (aa)	-	UPI000002678B

Gene Model

Click here to download MGP_SPRETEiJ_G0018877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0018877's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.954	ENSG00000165934	CPSF2	100	97.954	Homo_sapiens
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.551	ENSAPOG00000001242	cpsf2	100	85.551	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.823	ENSACIG00000009331	cpsf2	100	85.823	Amphilophus_citrinellus
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.678	ENSAOCG00000014095	cpsf2	100	85.678	Amphiprion_ocellaris
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.678	ENSAPEG00000009158	cpsf2	100	85.678	Amphiprion_percula
MGP_SPRETEiJ_G0018877	Cpsf2	96	85.921	ENSATEG00000017644	cpsf2	100	84.307	Anabas_testudineus
MGP_SPRETEiJ_G0018877	Cpsf2	100	95.287	ENSAPLG00000006330	CPSF2	100	95.287	Anas_platyrhynchos
MGP_SPRETEiJ_G0018877	Cpsf2	100	94.508	ENSACAG00000009245	CPSF2	100	94.508	Anolis_carolinensis
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.954	ENSANAG00000022915	CPSF2	100	97.954	Aotus_nancymaae
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.388	ENSAMXG00000018696	cpsf2	100	85.388	Astyanax_mexicanus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.210	ENSBTAG00000010227	CPSF2	100	98.210	Bos_taurus
MGP_SPRETEiJ_G0018877	Cpsf2	100	41.754	WBGene00017313	cpsf-2	100	41.440	Caenorhabditis_elegans
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.954	ENSCJAG00000018069	CPSF2	100	97.954	Callithrix_jacchus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSCAFG00000010909	CPSF2	100	98.082	Canis_familiaris
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSCAFG00020020670	CPSF2	100	98.082	Canis_lupus_dingo
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.210	ENSCHIG00000023848	CPSF2	100	98.210	Capra_hircus
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.698	ENSTSYG00000009036	CPSF2	100	97.698	Carlito_syrichta
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.210	ENSCPOG00000010899	CPSF2	100	98.210	Cavia_porcellus
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.954	ENSCCAG00000028088	CPSF2	100	97.954	Cebus_capucinus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSCATG00000030132	CPSF2	100	98.082	Cercocebus_atys
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSCLAG00000012404	CPSF2	100	98.082	Chinchilla_lanigera
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSCSAG00000011300	CPSF2	100	98.082	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0018877	Cpsf2	100	91.816	ENSCHOG00000012904	CPSF2	100	91.816	Choloepus_hoffmanni
MGP_SPRETEiJ_G0018877	Cpsf2	100	95.402	ENSCPBG00000008766	CPSF2	97	95.402	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0018877	Cpsf2	100	54.795	ENSCING00000007881	-	100	54.670	Ciona_intestinalis
MGP_SPRETEiJ_G0018877	Cpsf2	94	98.087	ENSCANG00000041651	CPSF2	100	98.087	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.721	ENSCGRG00001006901	Cpsf2	100	98.721	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.721	ENSCGRG00000012416	Cpsf2	100	98.721	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0018877	Cpsf2	100	83.523	ENSCSEG00000004116	cpsf2	100	83.523	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.044	ENSCVAG00000000095	cpsf2	100	85.171	Cyprinodon_variegatus
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.570	ENSDARG00000028971	cpsf2	100	85.570	Danio_rerio
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSDNOG00000042757	CPSF2	100	98.082	Dasypus_novemcinctus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.210	ENSDORG00000013709	Cpsf2	100	98.210	Dipodomys_ordii
MGP_SPRETEiJ_G0018877	Cpsf2	100	53.300	FBgn0027873	Cpsf100	100	53.059	Drosophila_melanogaster
MGP_SPRETEiJ_G0018877	Cpsf2	100	89.272	ENSETEG00000012123	CPSF2	100	89.272	Echinops_telfairi
MGP_SPRETEiJ_G0018877	Cpsf2	52	75.980	ENSEBUG00000012098	cpsf2	93	75.980	Eptatretus_burgeri
MGP_SPRETEiJ_G0018877	Cpsf2	89	97.250	ENSEASG00005021193	CPSF2	100	97.250	Equus_asinus_asinus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSECAG00000023935	CPSF2	100	98.082	Equus_caballus
MGP_SPRETEiJ_G0018877	Cpsf2	100	83.814	ENSELUG00000008442	cpsf2	100	83.814	Esox_lucius
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.210	ENSFCAG00000007886	CPSF2	100	98.210	Felis_catus
MGP_SPRETEiJ_G0018877	Cpsf2	100	95.530	ENSFALG00000002412	CPSF2	100	95.530	Ficedula_albicollis
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSFDAG00000006327	CPSF2	100	98.082	Fukomys_damarensis
MGP_SPRETEiJ_G0018877	Cpsf2	96	84.314	ENSFHEG00000015465	cpsf2	98	84.575	Fundulus_heteroclitus
MGP_SPRETEiJ_G0018877	Cpsf2	100	83.207	ENSGMOG00000008761	cpsf2	100	83.207	Gadus_morhua
MGP_SPRETEiJ_G0018877	Cpsf2	100	94.764	ENSGALG00000010783	CPSF2	100	95.275	Gallus_gallus
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.298	ENSGAFG00000001407	cpsf2	100	85.298	Gambusia_affinis
MGP_SPRETEiJ_G0018877	Cpsf2	100	84.157	ENSGACG00000008418	cpsf2	100	84.157	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0018877	Cpsf2	100	95.530	ENSGAGG00000008287	CPSF2	100	95.530	Gopherus_agassizii
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.954	ENSGGOG00000011799	CPSF2	100	97.954	Gorilla_gorilla
MGP_SPRETEiJ_G0018877	Cpsf2	100	84.918	ENSHBUG00000023466	cpsf2	100	84.918	Haplochromis_burtoni
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.954	ENSHGLG00000018311	CPSF2	100	97.954	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.954	ENSHGLG00100016460	CPSF2	100	97.954	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0018877	Cpsf2	100	84.664	ENSHCOG00000019527	cpsf2	98	84.664	Hippocampus_comes
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.133	ENSIPUG00000020857	cpsf2	100	85.133	Ictalurus_punctatus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSSTOG00000009528	CPSF2	100	98.082	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.210	ENSJJAG00000017925	Cpsf2	100	98.210	Jaculus_jaculus
MGP_SPRETEiJ_G0018877	Cpsf2	100	84.411	ENSKMAG00000019429	cpsf2	100	84.411	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0018877	Cpsf2	95	83.668	ENSLBEG00000011585	cpsf2	100	83.824	Labrus_bergylta
MGP_SPRETEiJ_G0018877	Cpsf2	100	89.272	ENSLACG00000019024	CPSF2	100	89.527	Latimeria_chalumnae
MGP_SPRETEiJ_G0018877	Cpsf2	100	86.946	ENSLOCG00000014102	cpsf2	100	86.946	Lepisosteus_oculatus
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.704	ENSLAFG00000004891	CPSF2	100	97.704	Loxodonta_africana
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSMFAG00000041212	CPSF2	100	98.082	Macaca_fascicularis
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSMMUG00000000699	CPSF2	100	98.082	Macaca_mulatta
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSMNEG00000031584	CPSF2	100	98.082	Macaca_nemestrina
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSMLEG00000029394	CPSF2	100	98.082	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.425	ENSMAMG00000004235	cpsf2	100	85.425	Mastacembelus_armatus
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.044	ENSMZEG00005001769	cpsf2	100	85.044	Maylandia_zebra
MGP_SPRETEiJ_G0018877	Cpsf2	100	94.770	ENSMGAG00000013122	CPSF2	100	95.281	Meleagris_gallopavo
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.593	ENSMAUG00000015160	Cpsf2	100	98.593	Mesocricetus_auratus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.210	ENSMICG00000016441	CPSF2	100	98.210	Microcebus_murinus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.977	ENSMOCG00000015372	Cpsf2	100	98.977	Microtus_ochrogaster
MGP_SPRETEiJ_G0018877	Cpsf2	100	80.608	ENSMMOG00000015590	cpsf2	100	80.608	Mola_mola
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.570	ENSMODG00000002042	CPSF2	100	97.570	Monodelphis_domestica
MGP_SPRETEiJ_G0018877	Cpsf2	100	82.510	ENSMALG00000022275	cpsf2	100	82.510	Monopterus_albus
MGP_SPRETEiJ_G0018877	Cpsf2	100	100.000	ENSMUSG00000041781	Cpsf2	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0018877	Cpsf2	100	99.488	MGP_PahariEiJ_G0029791	Cpsf2	100	99.488	Mus_pahari
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSMPUG00000007617	CPSF2	98	98.082	Mustela_putorius_furo
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.826	ENSMLUG00000005570	CPSF2	100	97.826	Myotis_lucifugus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.721	ENSNGAG00000020312	Cpsf2	100	98.721	Nannospalax_galili
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.425	ENSNBRG00000022402	cpsf2	100	85.425	Neolamprologus_brichardi
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.315	ENSNLEG00000017132	CPSF2	100	97.315	Nomascus_leucogenys
MGP_SPRETEiJ_G0018877	Cpsf2	91	99.029	ENSMEUG00000008138	CPSF2	91	99.029	Notamacropus_eugenii
MGP_SPRETEiJ_G0018877	Cpsf2	94	90.984	ENSOPRG00000008484	-	100	90.984	Ochotona_princeps
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.210	ENSODEG00000008682	CPSF2	100	98.210	Octodon_degus
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.678	ENSONIG00000005901	cpsf2	100	85.678	Oreochromis_niloticus
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.187	ENSOANG00000003822	CPSF2	100	97.187	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSOCUG00000005713	CPSF2	100	98.082	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0018877	Cpsf2	100	79.721	ENSORLG00000011628	cpsf2	100	79.721	Oryzias_latipes
MGP_SPRETEiJ_G0018877	Cpsf2	100	84.411	ENSORLG00020016980	cpsf2	100	84.411	Oryzias_latipes_hni
MGP_SPRETEiJ_G0018877	Cpsf2	100	84.411	ENSORLG00015011910	cpsf2	100	84.411	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0018877	Cpsf2	100	83.904	ENSOMEG00000022876	cpsf2	100	83.904	Oryzias_melastigma
MGP_SPRETEiJ_G0018877	Cpsf2	100	95.153	ENSOARG00000012889	CPSF2	100	95.153	Ovis_aries
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.954	ENSPPAG00000039666	CPSF2	100	97.954	Pan_paniscus
MGP_SPRETEiJ_G0018877	Cpsf2	99	98.207	ENSPPRG00000010869	CPSF2	100	98.207	Panthera_pardus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.210	ENSPTIG00000021202	CPSF2	100	98.210	Panthera_tigris_altaica
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.954	ENSPTRG00000006651	CPSF2	100	97.954	Pan_troglodytes
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSPANG00000017417	CPSF2	100	98.082	Papio_anubis
MGP_SPRETEiJ_G0018877	Cpsf2	100	81.703	ENSPKIG00000021453	cpsf2	100	81.703	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0018877	Cpsf2	100	95.019	ENSPSIG00000006289	CPSF2	100	95.019	Pelodiscus_sinensis
MGP_SPRETEiJ_G0018877	Cpsf2	76	79.568	ENSPMGG00000002511	cpsf2	100	80.066	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.977	ENSPEMG00000007917	Cpsf2	100	98.977	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0018877	Cpsf2	100	74.336	ENSPMAG00000006205	cpsf2	100	74.336	Petromyzon_marinus
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.570	ENSPCIG00000011393	CPSF2	100	97.570	Phascolarctos_cinereus
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.171	ENSPFOG00000018648	cpsf2	100	85.171	Poecilia_formosa
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.171	ENSPLAG00000019199	cpsf2	99	85.171	Poecilia_latipinna
MGP_SPRETEiJ_G0018877	Cpsf2	96	85.526	ENSPMEG00000012100	cpsf2	100	84.893	Poecilia_mexicana
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.298	ENSPREG00000008960	cpsf2	100	85.298	Poecilia_reticulata
MGP_SPRETEiJ_G0018877	Cpsf2	63	97.177	ENSPPYG00000029685	-	100	97.177	Pongo_abelii
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.826	ENSPCAG00000012477	CPSF2	100	97.826	Procavia_capensis
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.954	ENSPCOG00000026387	CPSF2	100	97.954	Propithecus_coquereli
MGP_SPRETEiJ_G0018877	Cpsf2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.063	ENSPNYG00000023356	cpsf2	100	85.063	Pundamilia_nyererei
MGP_SPRETEiJ_G0018877	Cpsf2	100	86.277	ENSPNAG00000001849	cpsf2	100	86.277	Pygocentrus_nattereri
MGP_SPRETEiJ_G0018877	Cpsf2	100	99.105	ENSRNOG00000005733	Cpsf2	100	99.105	Rattus_norvegicus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSRBIG00000044792	CPSF2	100	98.082	Rhinopithecus_bieti
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSRROG00000034875	CPSF2	100	98.082	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.954	ENSSBOG00000024571	CPSF2	100	97.954	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.698	ENSSHAG00000010458	CPSF2	100	97.698	Sarcophilus_harrisii
MGP_SPRETEiJ_G0018877	Cpsf2	100	86.785	ENSSFOG00015002117	cpsf2	100	86.785	Scleropages_formosus
MGP_SPRETEiJ_G0018877	Cpsf2	100	83.650	ENSSMAG00000002001	cpsf2	100	83.650	Scophthalmus_maximus
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.805	ENSSDUG00000004084	cpsf2	100	85.805	Seriola_dumerili
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.298	ENSSLDG00000024330	cpsf2	100	85.298	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0018877	Cpsf2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
MGP_SPRETEiJ_G0018877	Cpsf2	100	94.764	ENSSPUG00000013485	CPSF2	100	94.764	Sphenodon_punctatus
MGP_SPRETEiJ_G0018877	Cpsf2	100	84.791	ENSSPAG00000013284	cpsf2	100	84.791	Stegastes_partitus
MGP_SPRETEiJ_G0018877	Cpsf2	100	97.954	ENSSSCG00000002447	CPSF2	100	97.954	Sus_scrofa
MGP_SPRETEiJ_G0018877	Cpsf2	100	95.658	ENSTGUG00000012571	-	100	95.658	Taeniopygia_guttata
MGP_SPRETEiJ_G0018877	Cpsf2	100	84.284	ENSTRUG00000003742	cpsf2	100	84.284	Takifugu_rubripes
MGP_SPRETEiJ_G0018877	Cpsf2	100	83.059	ENSTNIG00000012228	cpsf2	100	83.818	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0018877	Cpsf2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
MGP_SPRETEiJ_G0018877	Cpsf2	88	97.917	ENSTTRG00000008697	CPSF2	88	97.917	Tursiops_truncatus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.210	ENSUAMG00000028071	CPSF2	100	98.210	Ursus_americanus
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.210	ENSUMAG00000005029	CPSF2	100	98.317	Ursus_maritimus
MGP_SPRETEiJ_G0018877	Cpsf2	99	98.079	ENSVPAG00000003503	CPSF2	100	98.079	Vicugna_pacos
MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	ENSVVUG00000024642	CPSF2	100	98.082	Vulpes_vulpes
MGP_SPRETEiJ_G0018877	Cpsf2	100	91.188	ENSXETG00000010289	cpsf2	100	91.188	Xenopus_tropicalis
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.425	ENSXCOG00000001764	cpsf2	100	85.425	Xiphophorus_couchianus
MGP_SPRETEiJ_G0018877	Cpsf2	100	85.551	ENSXMAG00000017048	cpsf2	100	85.551	Xiphophorus_maculatus