EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0018943 (Gene tree)
Gene ID: -
Gene Symbol: Papola
Alias: PapIII|Plap
Full Name: poly (A) polymerase alpha
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 58586 bases
Position: chr12:100276529-100335114
Accession: 109301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0034825	PAP_RNA-bind	PF04926.15	1.5e-25	1	1
MGP_SPRETEiJ_P0034820	PAP_RNA-bind	PF04926.15	1.1e-24	1	1
MGP_SPRETEiJ_P0034819	PAP_RNA-bind	PF04926.15	1.2e-24	1	1
MGP_SPRETEiJ_P0034812	PAP_RNA-bind	PF04926.15	1.2e-24	1	1
MGP_SPRETEiJ_P0034824	PAP_RNA-bind	PF04926.15	1e-23	1	1
MGP_SPRETEiJ_P0034810	PAP_RNA-bind	PF04926.15	9.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0034821	-	1169	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0034820	-	4315	-	MGP_SPRETEiJ_P0034820	739 (aa)	-	-
MGP_SPRETEiJ_T0034811	-	726	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0034810	-	2436	-	MGP_SPRETEiJ_P0034810	732 (aa)	-	-
MGP_SPRETEiJ_T0034813	-	2076	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0034812	-	2548	-	MGP_SPRETEiJ_P0034812	693 (aa)	-	-
MGP_SPRETEiJ_T0034815	-	809	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0034814	-	2223	-	MGP_SPRETEiJ_P0034814	111 (aa)	-	UPI0001F796E7
MGP_SPRETEiJ_T0034817	-	529	-	MGP_SPRETEiJ_P0034817	66 (aa)	-	UPI0001F796E9
MGP_SPRETEiJ_T0034816	-	4361	-	MGP_SPRETEiJ_P0034816	168 (aa)	-	UPI0001F796E8
MGP_SPRETEiJ_T0034819	-	2609	-	MGP_SPRETEiJ_P0034819	718 (aa)	-	-
MGP_SPRETEiJ_T0034818	-	1033	-	MGP_SPRETEiJ_P0034818	293 (aa)	-	UPI000016CB91
MGP_SPRETEiJ_T0034822	-	701	-	MGP_SPRETEiJ_P0034822	94 (aa)	-	-
MGP_SPRETEiJ_T0034823	-	295	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0034824	-	1512	-	MGP_SPRETEiJ_P0034824	418 (aa)	-	-
MGP_SPRETEiJ_T0034825	-	966	-	MGP_SPRETEiJ_P0034825	321 (aa)	-	-
MGP_SPRETEiJ_T0034826	-	583	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0034827	-	685	-	MGP_SPRETEiJ_P0034827	119 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0018943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0018943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0018943	Papola	93	85.692	MGP_SPRETEiJ_G0028966	Papolb	99	85.692
MGP_SPRETEiJ_G0018943	Papola	98	61.088	MGP_SPRETEiJ_G0016987	Papolg	97	81.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0018943	Papola	100	95.580	ENSG00000090060	PAPOLA	98	99.283	Homo_sapiens
MGP_SPRETEiJ_G0018943	Papola	99	96.070	ENSAMEG00000014142	PAPOLA	99	96.070	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0018943	Papola	99	90.379	ENSAPLG00000006645	PAPOLA	99	90.379	Anas_platyrhynchos
MGP_SPRETEiJ_G0018943	Papola	100	91.925	ENSACAG00000013474	PAPOLA	99	94.992	Anolis_carolinensis
MGP_SPRETEiJ_G0018943	Papola	77	91.011	ENSANAG00000027941	-	98	91.011	Aotus_nancymaae
MGP_SPRETEiJ_G0018943	Papola	99	96.671	ENSANAG00000018274	PAPOLA	99	98.346	Aotus_nancymaae
MGP_SPRETEiJ_G0018943	Papola	100	73.429	ENSAMXG00000018141	papola	99	84.740	Astyanax_mexicanus
MGP_SPRETEiJ_G0018943	Papola	100	97.403	ENSBTAG00000004054	PAPOLA	100	97.403	Bos_taurus
MGP_SPRETEiJ_G0018943	Papola	100	96.423	ENSCJAG00000006512	PAPOLA	99	98.346	Callithrix_jacchus
MGP_SPRETEiJ_G0018943	Papola	100	95.705	ENSCAFG00000017783	PAPOLA	100	95.705	Canis_familiaris
MGP_SPRETEiJ_G0018943	Papola	100	96.211	ENSCAFG00020011550	PAPOLA	100	96.211	Canis_lupus_dingo
MGP_SPRETEiJ_G0018943	Papola	100	95.940	ENSCHIG00000025004	-	100	95.940	Capra_hircus
MGP_SPRETEiJ_G0018943	Papola	99	96.232	ENSTSYG00000012384	PAPOLA	99	96.232	Carlito_syrichta
MGP_SPRETEiJ_G0018943	Papola	100	94.410	ENSCPOG00000002648	PAPOLA	100	92.641	Cavia_porcellus
MGP_SPRETEiJ_G0018943	Papola	100	95.442	ENSCCAG00000025120	PAPOLA	98	97.782	Cebus_capucinus
MGP_SPRETEiJ_G0018943	Papola	100	95.580	ENSCATG00000018815	PAPOLA	99	98.696	Cercocebus_atys
MGP_SPRETEiJ_G0018943	Papola	100	96.825	ENSCLAG00000016342	PAPOLA	100	96.825	Chinchilla_lanigera
MGP_SPRETEiJ_G0018943	Papola	100	95.570	ENSCSAG00000010516	PAPOLA	100	95.570	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0018943	Papola	86	79.837	ENSCHOG00000001115	PAPOLA	72	81.818	Choloepus_hoffmanni
MGP_SPRETEiJ_G0018943	Papola	100	92.432	ENSCPBG00000024125	PAPOLA	100	92.432	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0018943	Papola	100	92.988	ENSCANG00000000159	PAPOLA	100	90.310	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0018943	Papola	100	87.578	ENSCGRG00001002732	-	99	86.043	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0018943	Papola	100	92.857	ENSCGRG00001000229	-	100	90.257	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0018943	Papola	100	98.846	ENSCGRG00001022693	-	100	98.846	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0018943	Papola	98	82.369	ENSCGRG00000001888	-	96	82.507	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0018943	Papola	100	98.111	ENSCGRG00000003664	-	100	98.841	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0018943	Papola	100	92.547	ENSCGRG00000000257	-	100	85.694	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0018943	Papola	69	53.846	ENSCSEG00000001841	-	71	53.846	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0018943	Papola	100	70.799	ENSDARG00000009585	papola	100	70.661	Danio_rerio
MGP_SPRETEiJ_G0018943	Papola	100	94.704	ENSDORG00000013415	-	100	90.042	Dipodomys_ordii
MGP_SPRETEiJ_G0018943	Papola	100	84.783	ENSETEG00000004889	PAPOLA	100	82.768	Echinops_telfairi
MGP_SPRETEiJ_G0018943	Papola	100	69.221	ENSELUG00000018972	papola	100	68.966	Esox_lucius
MGP_SPRETEiJ_G0018943	Papola	100	97.691	ENSFCAG00000006784	PAPOLA	100	97.691	Felis_catus
MGP_SPRETEiJ_G0018943	Papola	99	93.750	ENSFALG00000002547	PAPOLA	98	87.368	Ficedula_albicollis
MGP_SPRETEiJ_G0018943	Papola	99	95.362	ENSFDAG00000010370	PAPOLA	100	95.362	Fukomys_damarensis
MGP_SPRETEiJ_G0018943	Papola	99	62.848	ENSGMOG00000010209	papola	100	66.910	Gadus_morhua
MGP_SPRETEiJ_G0018943	Papola	100	89.986	ENSGALG00000033099	PAPOLA	100	89.986	Gallus_gallus
MGP_SPRETEiJ_G0018943	Papola	69	53.958	ENSGACG00000006142	-	100	53.542	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0018943	Papola	96	94.713	ENSGAGG00000020500	PAPOLA	99	94.713	Gopherus_agassizii
MGP_SPRETEiJ_G0018943	Papola	100	95.580	ENSGGOG00000006287	PAPOLA	100	95.580	Gorilla_gorilla
MGP_SPRETEiJ_G0018943	Papola	100	96.248	ENSHGLG00000007909	-	100	96.248	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0018943	Papola	100	83.540	ENSHGLG00000017457	-	100	82.698	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0018943	Papola	100	83.230	ENSHGLG00000007467	-	100	77.267	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0018943	Papola	100	96.104	ENSHGLG00100017273	PAPOLA	100	96.104	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0018943	Papola	100	68.568	ENSIPUG00000005919	papola	100	68.274	Ictalurus_punctatus
MGP_SPRETEiJ_G0018943	Papola	100	97.403	ENSSTOG00000011471	PAPOLA	100	97.403	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0018943	Papola	99	96.667	ENSJJAG00000024340	Papola	100	96.667	Jaculus_jaculus
MGP_SPRETEiJ_G0018943	Papola	99	76.518	ENSLACG00000018136	PAPOLA	99	76.518	Latimeria_chalumnae
MGP_SPRETEiJ_G0018943	Papola	99	66.220	ENSLOCG00000008632	papola	99	66.265	Lepisosteus_oculatus
MGP_SPRETEiJ_G0018943	Papola	99	95.109	ENSLAFG00000000946	PAPOLA	99	95.109	Loxodonta_africana
MGP_SPRETEiJ_G0018943	Papola	100	95.580	ENSMFAG00000001792	PAPOLA	99	98.521	Macaca_fascicularis
MGP_SPRETEiJ_G0018943	Papola	100	95.570	ENSMMUG00000018610	PAPOLA	100	96.413	Macaca_mulatta
MGP_SPRETEiJ_G0018943	Papola	100	95.580	ENSMNEG00000043747	PAPOLA	99	97.426	Macaca_nemestrina
MGP_SPRETEiJ_G0018943	Papola	100	95.580	ENSMLEG00000032066	PAPOLA	100	95.580	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0018943	Papola	100	88.820	ENSMGAG00000013228	-	100	89.050	Meleagris_gallopavo
MGP_SPRETEiJ_G0018943	Papola	100	98.701	ENSMAUG00000017178	Papola	100	98.701	Mesocricetus_auratus
MGP_SPRETEiJ_G0018943	Papola	100	97.262	ENSMICG00000010347	PAPOLA	100	97.262	Microcebus_murinus
MGP_SPRETEiJ_G0018943	Papola	100	99.134	ENSMOCG00000021670	Papola	100	99.134	Microtus_ochrogaster
MGP_SPRETEiJ_G0018943	Papola	99	80.972	ENSMODG00000001969	-	99	80.972	Monodelphis_domestica
MGP_SPRETEiJ_G0018943	Papola	100	95.129	ENSMODG00000012887	-	100	95.129	Monodelphis_domestica
MGP_SPRETEiJ_G0018943	Papola	100	99.567	MGP_CAROLIEiJ_G0018093	Papola	100	99.567	Mus_caroli
MGP_SPRETEiJ_G0018943	Papola	100	99.865	ENSMUSG00000021111	Papola	100	99.865	Mus_musculus
MGP_SPRETEiJ_G0018943	Papola	100	99.865	MGP_PahariEiJ_G0029850	Papola	100	99.865	Mus_pahari
MGP_SPRETEiJ_G0018943	Papola	100	96.888	ENSMPUG00000003054	PAPOLA	100	96.888	Mustela_putorius_furo
MGP_SPRETEiJ_G0018943	Papola	100	94.317	ENSMLUG00000010922	PAPOLA	100	94.317	Myotis_lucifugus
MGP_SPRETEiJ_G0018943	Papola	100	97.258	ENSNGAG00000022172	Papola	100	97.258	Nannospalax_galili
MGP_SPRETEiJ_G0018943	Papola	99	90.935	ENSNLEG00000000625	PAPOLA	100	90.935	Nomascus_leucogenys
MGP_SPRETEiJ_G0018943	Papola	74	93.443	ENSMEUG00000007831	-	74	85.827	Notamacropus_eugenii
MGP_SPRETEiJ_G0018943	Papola	100	92.570	ENSOPRG00000007625	PAPOLA	100	90.430	Ochotona_princeps
MGP_SPRETEiJ_G0018943	Papola	68	54.008	ENSONIG00000001062	-	96	54.008	Oreochromis_niloticus
MGP_SPRETEiJ_G0018943	Papola	99	96.527	ENSOANG00000013812	PAPOLA	99	96.527	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0018943	Papola	99	93.080	ENSOCUG00000011531	PAPOLA	99	93.080	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0018943	Papola	100	96.486	ENSOGAG00000004611	PAPOLA	100	96.486	Otolemur_garnettii
MGP_SPRETEiJ_G0018943	Papola	100	96.482	ENSOARG00000016579	-	100	96.482	Ovis_aries
MGP_SPRETEiJ_G0018943	Papola	100	95.580	ENSPPAG00000030505	PAPOLA	100	95.580	Pan_paniscus
MGP_SPRETEiJ_G0018943	Papola	100	96.752	ENSPPRG00000008616	PAPOLA	100	96.752	Panthera_pardus
MGP_SPRETEiJ_G0018943	Papola	99	96.739	ENSPTIG00000018852	PAPOLA	99	96.739	Panthera_tigris_altaica
MGP_SPRETEiJ_G0018943	Papola	100	95.580	ENSPTRG00000006704	PAPOLA	100	95.580	Pan_troglodytes
MGP_SPRETEiJ_G0018943	Papola	100	95.580	ENSPANG00000025582	PAPOLA	98	98.696	Papio_anubis
MGP_SPRETEiJ_G0018943	Papola	96	74.208	ENSPKIG00000014471	papola	100	69.935	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0018943	Papola	100	92.973	ENSPSIG00000014157	PAPOLA	87	92.973	Pelodiscus_sinensis
MGP_SPRETEiJ_G0018943	Papola	100	98.990	ENSPEMG00000000043	Papola	100	98.990	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0018943	Papola	100	94.865	ENSPCIG00000013234	PAPOLA	100	95.633	Phascolarctos_cinereus
MGP_SPRETEiJ_G0018943	Papola	100	93.154	ENSPPYG00000006128	PAPOLA	100	93.154	Pongo_abelii
MGP_SPRETEiJ_G0018943	Papola	100	90.683	ENSPCAG00000004199	PAPOLA	100	90.701	Procavia_capensis
MGP_SPRETEiJ_G0018943	Papola	100	94.410	ENSPCOG00000022117	PAPOLA	99	93.488	Propithecus_coquereli
MGP_SPRETEiJ_G0018943	Papola	100	95.264	ENSPVAG00000013925	PAPOLA	100	95.264	Pteropus_vampyrus
MGP_SPRETEiJ_G0018943	Papola	100	72.073	ENSPNAG00000010467	papola	100	72.238	Pygocentrus_nattereri
MGP_SPRETEiJ_G0018943	Papola	100	99.068	ENSRNOG00000004827	Papola	100	98.782	Rattus_norvegicus
MGP_SPRETEiJ_G0018943	Papola	99	95.983	ENSRBIG00000038490	PAPOLA	100	95.983	Rhinopithecus_bieti
MGP_SPRETEiJ_G0018943	Papola	100	95.580	ENSRROG00000025545	PAPOLA	100	95.580	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0018943	Papola	99	96.270	ENSSBOG00000024061	PAPOLA	100	96.270	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0018943	Papola	99	94.565	ENSSHAG00000015211	PAPOLA	99	94.565	Sarcophilus_harrisii
MGP_SPRETEiJ_G0018943	Papola	100	70.862	ENSSFOG00015004431	papola	99	84.629	Scleropages_formosus
MGP_SPRETEiJ_G0018943	Papola	98	47.214	ENSSDUG00000018247	-	97	46.552	Seriola_dumerili
MGP_SPRETEiJ_G0018943	Papola	100	92.027	ENSSPUG00000005835	PAPOLA	100	92.027	Sphenodon_punctatus
MGP_SPRETEiJ_G0018943	Papola	100	97.403	ENSSSCG00000002505	-	100	97.403	Sus_scrofa
MGP_SPRETEiJ_G0018943	Papola	99	90.231	ENSTGUG00000012687	PAPOLA	99	90.231	Taeniopygia_guttata
MGP_SPRETEiJ_G0018943	Papola	75	87.772	ENSTBEG00000000194	PAPOLA	75	87.772	Tupaia_belangeri
MGP_SPRETEiJ_G0018943	Papola	79	96.875	ENSTTRG00000005717	PAPOLA	74	96.875	Tursiops_truncatus
MGP_SPRETEiJ_G0018943	Papola	61	98.815	ENSUAMG00000025737	PAPOLA	98	98.815	Ursus_americanus
MGP_SPRETEiJ_G0018943	Papola	99	95.788	ENSVPAG00000006464	PAPOLA	100	95.788	Vicugna_pacos
MGP_SPRETEiJ_G0018943	Papola	100	97.403	ENSVVUG00000028340	PAPOLA	100	97.403	Vulpes_vulpes
MGP_SPRETEiJ_G0018943	Papola	100	83.491	ENSXETG00000013949	papola	100	83.491	Xenopus_tropicalis