EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0019094 (Gene tree)
Gene ID: -
Gene Symbol: Arid4b
Alias: 6330417L24Rik|6720480E17Rik|BRCAA1|RBBP1L1|Rbp1l1|SAP180
Full Name: AT rich interactive domain 4B (RBP1-like)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 172703 bases
Position: chr13:10045692-10218394
Accession: 2137512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0035274	Tudor-knot	PF11717.8	3.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0035278	-	4187	-	MGP_SPRETEiJ_P0035278	617 (aa)	-	-
MGP_SPRETEiJ_T0035279	-	4874	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0035272	-	5783	-	MGP_SPRETEiJ_P0035272	1227 (aa)	-	-
MGP_SPRETEiJ_T0035273	-	5848	-	MGP_SPRETEiJ_P0035273	1227 (aa)	-	-
MGP_SPRETEiJ_T0035270	-	571	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0035271	-	1802	-	MGP_SPRETEiJ_P0035271	540 (aa)	-	-
MGP_SPRETEiJ_T0035276	-	678	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0035277	-	2363	-	MGP_SPRETEiJ_P0035277	731 (aa)	-	-
MGP_SPRETEiJ_T0035274	-	5864	-	MGP_SPRETEiJ_P0035274	1314 (aa)	-	-
MGP_SPRETEiJ_T0035275	-	3017	-	MGP_SPRETEiJ_P0035275	473 (aa)	-	-
MGP_SPRETEiJ_T0035280	-	745	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0019094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0019094's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0019094	Arid4b	100	88.593	ENSG00000054267	ARID4B	100	93.168	Homo_sapiens
MGP_SPRETEiJ_G0019094	Arid4b	99	88.508	ENSAMEG00000008801	ARID4B	100	88.052	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0019094	Arid4b	88	72.816	ENSACIG00000006313	tomm20a	98	72.087	Amphilophus_citrinellus
MGP_SPRETEiJ_G0019094	Arid4b	100	75.283	ENSAPLG00000004422	ARID4B	100	75.509	Anas_platyrhynchos
MGP_SPRETEiJ_G0019094	Arid4b	99	70.963	ENSACAG00000001289	ARID4B	100	71.721	Anolis_carolinensis
MGP_SPRETEiJ_G0019094	Arid4b	100	89.202	ENSANAG00000038088	ARID4B	100	89.049	Aotus_nancymaae
MGP_SPRETEiJ_G0019094	Arid4b	88	63.902	ENSACLG00000023521	tomm20a	98	63.902	Astatotilapia_calliptera
MGP_SPRETEiJ_G0019094	Arid4b	77	88.000	ENSAMXG00000003657	tomm20a	92	60.040	Astyanax_mexicanus
MGP_SPRETEiJ_G0019094	Arid4b	100	86.996	ENSBTAG00000000222	ARID4B	100	86.996	Bos_taurus
MGP_SPRETEiJ_G0019094	Arid4b	100	88.052	ENSCJAG00000018055	ARID4B	100	87.823	Callithrix_jacchus
MGP_SPRETEiJ_G0019094	Arid4b	100	88.669	ENSCAFG00000011439	ARID4B	100	88.213	Canis_familiaris
MGP_SPRETEiJ_G0019094	Arid4b	99	88.294	ENSCAFG00020027130	ARID4B	99	87.835	Canis_lupus_dingo
MGP_SPRETEiJ_G0019094	Arid4b	99	84.557	ENSCHIG00000020742	ARID4B	100	84.480	Capra_hircus
MGP_SPRETEiJ_G0019094	Arid4b	100	88.821	ENSTSYG00000010028	ARID4B	100	88.745	Carlito_syrichta
MGP_SPRETEiJ_G0019094	Arid4b	99	86.748	ENSCPOG00000034766	ARID4B	100	86.976	Cavia_porcellus
MGP_SPRETEiJ_G0019094	Arid4b	100	89.049	ENSCCAG00000021520	ARID4B	100	88.897	Cebus_capucinus
MGP_SPRETEiJ_G0019094	Arid4b	100	89.430	ENSCATG00000042166	ARID4B	100	89.278	Cercocebus_atys
MGP_SPRETEiJ_G0019094	Arid4b	100	88.441	ENSCLAG00000003255	ARID4B	100	88.137	Chinchilla_lanigera
MGP_SPRETEiJ_G0019094	Arid4b	100	89.582	ENSCSAG00000010069	ARID4B	100	89.430	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0019094	Arid4b	76	100.000	ENSCHOG00000001152	ARID4B	76	100.000	Choloepus_hoffmanni
MGP_SPRETEiJ_G0019094	Arid4b	100	74.698	ENSCPBG00000004501	ARID4B	100	75.378	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0019094	Arid4b	100	85.856	ENSCANG00000027498	ARID4B	100	80.633	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0019094	Arid4b	100	93.688	ENSCGRG00001014397	Arid4b	100	93.916	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0019094	Arid4b	99	93.679	ENSCGRG00000004910	Arid4b	100	93.907	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0019094	Arid4b	96	50.648	ENSCVAG00000003244	tomm20a	100	51.420	Cyprinodon_variegatus
MGP_SPRETEiJ_G0019094	Arid4b	56	86.945	ENSDNOG00000005711	ARID4B	100	86.945	Dasypus_novemcinctus
MGP_SPRETEiJ_G0019094	Arid4b	99	88.889	ENSDORG00000006422	Arid4b	100	88.432	Dipodomys_ordii
MGP_SPRETEiJ_G0019094	Arid4b	89	87.049	ENSETEG00000005596	ARID4B	92	86.479	Echinops_telfairi
MGP_SPRETEiJ_G0019094	Arid4b	99	86.672	ENSEASG00005000677	ARID4B	99	87.433	Equus_asinus_asinus
MGP_SPRETEiJ_G0019094	Arid4b	99	87.966	ENSECAG00000017836	ARID4B	99	88.347	Equus_caballus
MGP_SPRETEiJ_G0019094	Arid4b	83	100.000	ENSEEUG00000005378	ARID4B	86	100.000	Erinaceus_europaeus
MGP_SPRETEiJ_G0019094	Arid4b	100	87.833	ENSFCAG00000030096	ARID4B	100	87.605	Felis_catus
MGP_SPRETEiJ_G0019094	Arid4b	100	76.360	ENSFALG00000013548	ARID4B	98	76.360	Ficedula_albicollis
MGP_SPRETEiJ_G0019094	Arid4b	99	87.890	ENSFDAG00000014194	ARID4B	100	87.053	Fukomys_damarensis
MGP_SPRETEiJ_G0019094	Arid4b	99	51.293	ENSFHEG00000003798	tomm20a	100	50.465	Fundulus_heteroclitus
MGP_SPRETEiJ_G0019094	Arid4b	90	52.815	ENSGMOG00000018747	tomm20a	53	72.993	Gadus_morhua
MGP_SPRETEiJ_G0019094	Arid4b	99	53.198	ENSGACG00000004298	tomm20a	100	52.487	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0019094	Arid4b	100	73.716	ENSGAGG00000020544	ARID4B	98	73.664	Gopherus_agassizii
MGP_SPRETEiJ_G0019094	Arid4b	100	89.125	ENSGGOG00000022080	ARID4B	100	88.973	Gorilla_gorilla
MGP_SPRETEiJ_G0019094	Arid4b	100	88.517	ENSHGLG00000012546	ARID4B	100	88.213	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0019094	Arid4b	100	88.517	ENSHGLG00100015436	ARID4B	100	88.213	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0019094	Arid4b	91	73.301	ENSHCOG00000010376	tomm20a	95	73.301	Hippocampus_comes
MGP_SPRETEiJ_G0019094	Arid4b	100	88.678	ENSSTOG00000002810	ARID4B	100	88.754	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0019094	Arid4b	100	86.236	ENSJJAG00000021368	Arid4b	100	85.475	Jaculus_jaculus
MGP_SPRETEiJ_G0019094	Arid4b	88	52.195	ENSKMAG00000010987	tomm20a	98	73.387	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0019094	Arid4b	99	87.510	ENSLAFG00000014295	ARID4B	100	86.976	Loxodonta_africana
MGP_SPRETEiJ_G0019094	Arid4b	100	89.430	ENSMFAG00000044016	ARID4B	100	89.278	Macaca_fascicularis
MGP_SPRETEiJ_G0019094	Arid4b	100	89.430	ENSMMUG00000007141	ARID4B	100	89.278	Macaca_mulatta
MGP_SPRETEiJ_G0019094	Arid4b	100	88.973	ENSMNEG00000014840	ARID4B	100	88.745	Macaca_nemestrina
MGP_SPRETEiJ_G0019094	Arid4b	99	89.373	ENSMLEG00000033583	ARID4B	100	89.220	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0019094	Arid4b	100	76.133	ENSMGAG00000011896	ARID4B	100	76.057	Meleagris_gallopavo
MGP_SPRETEiJ_G0019094	Arid4b	100	89.522	ENSMICG00000016358	ARID4B	100	89.370	Microcebus_murinus
MGP_SPRETEiJ_G0019094	Arid4b	87	75.243	ENSMMOG00000000561	tomm20a	95	74.029	Mola_mola
MGP_SPRETEiJ_G0019094	Arid4b	100	81.929	ENSMODG00000008417	ARID4B	100	81.473	Monodelphis_domestica
MGP_SPRETEiJ_G0019094	Arid4b	100	98.097	MGP_CAROLIEiJ_G0018236	Arid4b	100	98.097	Mus_caroli
MGP_SPRETEiJ_G0019094	Arid4b	100	99.087	ENSMUSG00000039219	Arid4b	100	99.087	Mus_musculus
MGP_SPRETEiJ_G0019094	Arid4b	100	97.489	MGP_PahariEiJ_G0019286	Arid4b	100	97.489	Mus_pahari
MGP_SPRETEiJ_G0019094	Arid4b	100	87.529	ENSMPUG00000002906	ARID4B	100	87.224	Mustela_putorius_furo
MGP_SPRETEiJ_G0019094	Arid4b	99	86.094	ENSMLUG00000016232	ARID4B	100	85.638	Myotis_lucifugus
MGP_SPRETEiJ_G0019094	Arid4b	100	87.585	ENSNGAG00000014629	Arid4b	100	87.282	Nannospalax_galili
MGP_SPRETEiJ_G0019094	Arid4b	88	73.236	ENSNBRG00000019684	tomm20a	98	73.236	Neolamprologus_brichardi
MGP_SPRETEiJ_G0019094	Arid4b	100	89.430	ENSNLEG00000002665	ARID4B	100	89.278	Nomascus_leucogenys
MGP_SPRETEiJ_G0019094	Arid4b	100	88.137	ENSODEG00000005373	ARID4B	100	87.681	Octodon_degus
MGP_SPRETEiJ_G0019094	Arid4b	99	89.185	ENSOCUG00000006605	ARID4B	100	89.185	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0019094	Arid4b	100	52.639	ENSORLG00000012510	tomm20a	100	52.666	Oryzias_latipes
MGP_SPRETEiJ_G0019094	Arid4b	89	73.735	ENSORLG00020013988	tomm20a	99	73.735	Oryzias_latipes_hni
MGP_SPRETEiJ_G0019094	Arid4b	89	74.334	ENSORLG00015022835	tomm20a	99	74.334	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0019094	Arid4b	99	79.792	ENSOGAG00000012476	ARID4B	55	79.384	Otolemur_garnettii
MGP_SPRETEiJ_G0019094	Arid4b	99	86.128	ENSOARG00000003481	ARID4B	97	86.128	Ovis_aries
MGP_SPRETEiJ_G0019094	Arid4b	100	89.049	ENSPPAG00000031651	ARID4B	100	88.821	Pan_paniscus
MGP_SPRETEiJ_G0019094	Arid4b	100	87.833	ENSPPRG00000013739	ARID4B	100	87.300	Panthera_pardus
MGP_SPRETEiJ_G0019094	Arid4b	100	86.008	ENSPTIG00000012520	ARID4B	100	85.475	Panthera_tigris_altaica
MGP_SPRETEiJ_G0019094	Arid4b	85	87.871	ENSPTRG00000048786	-	95	87.601	Pan_troglodytes
MGP_SPRETEiJ_G0019094	Arid4b	100	89.202	ENSPTRG00000002129	ARID4B	100	88.973	Pan_troglodytes
MGP_SPRETEiJ_G0019094	Arid4b	99	88.957	ENSPANG00000013611	ARID4B	100	88.804	Papio_anubis
MGP_SPRETEiJ_G0019094	Arid4b	93	74.272	ENSPSIG00000011632	ARID4B	99	74.818	Pelodiscus_sinensis
MGP_SPRETEiJ_G0019094	Arid4b	100	80.714	ENSPCIG00000029756	ARID4B	100	80.790	Phascolarctos_cinereus
MGP_SPRETEiJ_G0019094	Arid4b	99	51.183	ENSPREG00000007996	tomm20a	100	52.044	Poecilia_reticulata
MGP_SPRETEiJ_G0019094	Arid4b	100	88.973	ENSPPYG00000000098	ARID4B	100	88.745	Pongo_abelii
MGP_SPRETEiJ_G0019094	Arid4b	100	89.210	ENSPCOG00000024328	ARID4B	100	89.134	Propithecus_coquereli
MGP_SPRETEiJ_G0019094	Arid4b	100	83.726	ENSPVAG00000015159	ARID4B	100	83.042	Pteropus_vampyrus
MGP_SPRETEiJ_G0019094	Arid4b	87	95.213	ENSRNOG00000016391	LOC100912163	97	95.213	Rattus_norvegicus
MGP_SPRETEiJ_G0019094	Arid4b	99	81.721	ENSRBIG00000042029	ARID4B	100	81.569	Rhinopithecus_bieti
MGP_SPRETEiJ_G0019094	Arid4b	100	89.430	ENSRROG00000045203	ARID4B	100	89.278	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0019094	Arid4b	83	87.923	ENSSBOG00000020196	ARID4B	100	87.740	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0019094	Arid4b	100	81.364	ENSSHAG00000015214	ARID4B	100	81.742	Sarcophilus_harrisii
MGP_SPRETEiJ_G0019094	Arid4b	100	50.110	ENSSFOG00015000132	arid4b	100	49.673	Scleropages_formosus
MGP_SPRETEiJ_G0019094	Arid4b	76	41.373	ENSSFOG00015008923	tomm20a	88	84.375	Scleropages_formosus
MGP_SPRETEiJ_G0019094	Arid4b	100	75.151	ENSSPUG00000015466	ARID4B	98	74.698	Sphenodon_punctatus
MGP_SPRETEiJ_G0019094	Arid4b	100	87.681	ENSSSCG00000010156	ARID4B	100	87.300	Sus_scrofa
MGP_SPRETEiJ_G0019094	Arid4b	100	76.841	ENSTGUG00000010246	ARID4B	100	76.158	Taeniopygia_guttata
MGP_SPRETEiJ_G0019094	Arid4b	63	42.244	ENSTRUG00000002893	tomm20a	85	44.704	Takifugu_rubripes
MGP_SPRETEiJ_G0019094	Arid4b	80	83.298	ENSTBEG00000003961	ARID4B	80	81.799	Tupaia_belangeri
MGP_SPRETEiJ_G0019094	Arid4b	100	87.529	ENSTTRG00000002228	ARID4B	100	86.768	Tursiops_truncatus
MGP_SPRETEiJ_G0019094	Arid4b	99	87.664	ENSUMAG00000006905	ARID4B	100	86.893	Ursus_maritimus
MGP_SPRETEiJ_G0019094	Arid4b	69	90.000	ENSVPAG00000006841	ARID4B	69	90.000	Vicugna_pacos
MGP_SPRETEiJ_G0019094	Arid4b	99	87.211	ENSVVUG00000008154	ARID4B	99	87.211	Vulpes_vulpes
MGP_SPRETEiJ_G0019094	Arid4b	100	61.353	ENSXETG00000024651	arid4b	100	60.977	Xenopus_tropicalis
MGP_SPRETEiJ_G0019094	Arid4b	99	51.070	ENSXMAG00000006538	tomm20a	100	51.022	Xiphophorus_maculatus