EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0019220 (Gene tree)
Gene ID: -
Gene Symbol: Tdp2
Alias: D13Ertd656e|Ttrap
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 14008 bases
Position: chr13:20828909-20842916
Accession: 1860486
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0035522	Exo_endo_phos	PF03372.23	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0035522	-	1978	-	MGP_SPRETEiJ_P0035522	372 (aa)	-	-
MGP_SPRETEiJ_T0035523	-	541	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0019220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0019220's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0019220	Tdp2	91	68.622	ENSG00000111802	TDP2	91	74.820	Homo_sapiens
MGP_SPRETEiJ_G0019220	Tdp2	67	53.937	ENSAPOG00000018379	-	89	53.937	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0019220	Tdp2	74	75.357	ENSAMEG00000010230	TDP2	100	75.357	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0019220	Tdp2	70	53.030	ENSAPEG00000004208	-	94	53.030	Amphiprion_percula
MGP_SPRETEiJ_G0019220	Tdp2	67	51.362	ENSATEG00000010663	-	83	51.362	Anabas_testudineus
MGP_SPRETEiJ_G0019220	Tdp2	90	60.947	ENSACAG00000002332	TDP2	99	57.650	Anolis_carolinensis
MGP_SPRETEiJ_G0019220	Tdp2	91	69.501	ENSANAG00000020033	TDP2	99	67.131	Aotus_nancymaae
MGP_SPRETEiJ_G0019220	Tdp2	73	50.000	ENSACLG00000016174	tdp2b	96	50.000	Astatotilapia_calliptera
MGP_SPRETEiJ_G0019220	Tdp2	66	56.855	ENSACLG00000016148	tdp2b	88	56.855	Astatotilapia_calliptera
MGP_SPRETEiJ_G0019220	Tdp2	74	49.658	ENSACLG00000016132	tdp2b	98	49.658	Astatotilapia_calliptera
MGP_SPRETEiJ_G0019220	Tdp2	67	51.953	ENSAMXG00000036549	tdp2a	83	51.953	Astyanax_mexicanus
MGP_SPRETEiJ_G0019220	Tdp2	91	48.518	ENSAMXG00000011775	tdp2b	98	48.518	Astyanax_mexicanus
MGP_SPRETEiJ_G0019220	Tdp2	91	68.222	ENSBTAG00000000365	TDP2	98	67.135	Bos_taurus
MGP_SPRETEiJ_G0019220	Tdp2	87	33.131	WBGene00013405	tdpt-1	85	33.131	Caenorhabditis_elegans
MGP_SPRETEiJ_G0019220	Tdp2	93	67.335	ENSCJAG00000006074	TDP2	91	74.101	Callithrix_jacchus
MGP_SPRETEiJ_G0019220	Tdp2	94	67.232	ENSCJAG00000021963	-	98	67.232	Callithrix_jacchus
MGP_SPRETEiJ_G0019220	Tdp2	96	66.111	ENSCAFG00000010428	TDP2	96	76.071	Canis_familiaris
MGP_SPRETEiJ_G0019220	Tdp2	74	76.071	ENSCAFG00020009994	TDP2	96	76.071	Canis_lupus_dingo
MGP_SPRETEiJ_G0019220	Tdp2	78	73.559	ENSCHIG00000015294	-	95	75.887	Capra_hircus
MGP_SPRETEiJ_G0019220	Tdp2	82	68.831	ENSTSYG00000037199	TDP2	99	69.156	Carlito_syrichta
MGP_SPRETEiJ_G0019220	Tdp2	91	69.706	ENSCPOG00000006390	TDP2	99	68.732	Cavia_porcellus
MGP_SPRETEiJ_G0019220	Tdp2	96	66.852	ENSCCAG00000022734	TDP2	91	75.180	Cebus_capucinus
MGP_SPRETEiJ_G0019220	Tdp2	91	69.501	ENSCATG00000022076	TDP2	91	75.899	Cercocebus_atys
MGP_SPRETEiJ_G0019220	Tdp2	94	66.111	ENSCLAG00000002072	TDP2	99	66.111	Chinchilla_lanigera
MGP_SPRETEiJ_G0019220	Tdp2	93	68.481	ENSCSAG00000007769	TDP2	97	68.481	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0019220	Tdp2	91	59.587	ENSCPBG00000006551	TDP2	95	56.334	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0019220	Tdp2	91	69.208	ENSCANG00000040122	TDP2	92	75.540	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0019220	Tdp2	92	87.683	ENSCGRG00001000384	Tdp2	100	84.800	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0019220	Tdp2	92	81.818	ENSCGRG00000010250	Tdp2	98	81.127	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0019220	Tdp2	90	48.864	ENSCVAG00000003114	tdp2b	96	48.588	Cyprinodon_variegatus
MGP_SPRETEiJ_G0019220	Tdp2	90	47.802	ENSDARG00000035954	tdp2b	95	47.802	Danio_rerio
MGP_SPRETEiJ_G0019220	Tdp2	66	49.194	ENSDARG00000069941	tdp2a	55	49.194	Danio_rerio
MGP_SPRETEiJ_G0019220	Tdp2	98	65.123	ENSDNOG00000044082	TDP2	99	65.123	Dasypus_novemcinctus
MGP_SPRETEiJ_G0019220	Tdp2	74	74.101	ENSETEG00000019096	TDP2	100	74.101	Echinops_telfairi
MGP_SPRETEiJ_G0019220	Tdp2	70	52.852	ENSEBUG00000006535	tdp2a	61	52.852	Eptatretus_burgeri
MGP_SPRETEiJ_G0019220	Tdp2	91	68.328	ENSEASG00005007656	TDP2	98	67.514	Equus_asinus_asinus
MGP_SPRETEiJ_G0019220	Tdp2	91	68.035	ENSECAG00000014264	TDP2	98	67.422	Equus_caballus
MGP_SPRETEiJ_G0019220	Tdp2	91	67.059	ENSEEUG00000010776	TDP2	99	65.374	Erinaceus_europaeus
MGP_SPRETEiJ_G0019220	Tdp2	66	49.799	ENSELUG00000009321	tdp2a	77	48.996	Esox_lucius
MGP_SPRETEiJ_G0019220	Tdp2	93	48.819	ENSELUG00000016449	tdp2b	99	48.819	Esox_lucius
MGP_SPRETEiJ_G0019220	Tdp2	97	66.391	ENSFCAG00000025612	TDP2	99	66.391	Felis_catus
MGP_SPRETEiJ_G0019220	Tdp2	91	54.971	ENSFALG00000004710	TDP2	94	55.000	Ficedula_albicollis
MGP_SPRETEiJ_G0019220	Tdp2	74	74.820	ENSFDAG00000006512	TDP2	96	74.820	Fukomys_damarensis
MGP_SPRETEiJ_G0019220	Tdp2	72	49.084	ENSFHEG00000013560	-	92	49.084	Fundulus_heteroclitus
MGP_SPRETEiJ_G0019220	Tdp2	98	57.221	ENSGALG00000013637	TDP2	98	58.021	Gallus_gallus
MGP_SPRETEiJ_G0019220	Tdp2	99	55.733	ENSGAGG00000002853	TDP2	96	55.733	Gopherus_agassizii
MGP_SPRETEiJ_G0019220	Tdp2	91	68.328	ENSGGOG00000014237	TDP2	91	74.460	Gorilla_gorilla
MGP_SPRETEiJ_G0019220	Tdp2	55	55.924	ENSHBUG00000005421	-	88	55.924	Haplochromis_burtoni
MGP_SPRETEiJ_G0019220	Tdp2	94	50.681	ENSHBUG00000002714	tdp2b	98	50.681	Haplochromis_burtoni
MGP_SPRETEiJ_G0019220	Tdp2	93	66.571	ENSHGLG00000008655	TDP2	98	66.571	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0019220	Tdp2	93	66.571	ENSHGLG00100019087	TDP2	98	66.571	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0019220	Tdp2	89	50.282	ENSIPUG00000013691	tdp2b	94	50.282	Ictalurus_punctatus
MGP_SPRETEiJ_G0019220	Tdp2	91	69.412	ENSJJAG00000021685	Tdp2	98	69.412	Jaculus_jaculus
MGP_SPRETEiJ_G0019220	Tdp2	68	51.163	ENSKMAG00000015485	-	83	51.163	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0019220	Tdp2	91	55.747	ENSLACG00000008852	TDP2	95	55.747	Latimeria_chalumnae
MGP_SPRETEiJ_G0019220	Tdp2	73	58.182	ENSLOCG00000005817	tdp2b	98	58.182	Lepisosteus_oculatus
MGP_SPRETEiJ_G0019220	Tdp2	91	69.208	ENSLAFG00000002567	TDP2	100	68.750	Loxodonta_africana
MGP_SPRETEiJ_G0019220	Tdp2	91	69.795	ENSMFAG00000045296	TDP2	91	76.259	Macaca_fascicularis
MGP_SPRETEiJ_G0019220	Tdp2	91	69.795	ENSMMUG00000009803	TDP2	98	69.143	Macaca_mulatta
MGP_SPRETEiJ_G0019220	Tdp2	91	69.795	ENSMNEG00000038003	TDP2	91	76.259	Macaca_nemestrina
MGP_SPRETEiJ_G0019220	Tdp2	91	69.501	ENSMLEG00000028883	TDP2	99	68.451	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0019220	Tdp2	92	48.459	ENSMAMG00000013654	tdp2b	96	48.459	Mastacembelus_armatus
MGP_SPRETEiJ_G0019220	Tdp2	69	54.104	ENSMZEG00005004153	tdp2b	94	54.104	Maylandia_zebra
MGP_SPRETEiJ_G0019220	Tdp2	65	54.065	ENSMZEG00005004055	tdp2b	81	54.065	Maylandia_zebra
MGP_SPRETEiJ_G0019220	Tdp2	73	50.355	ENSMZEG00005004126	tdp2b	96	50.355	Maylandia_zebra
MGP_SPRETEiJ_G0019220	Tdp2	77	50.865	ENSMZEG00005004077	tdp2b	97	50.865	Maylandia_zebra
MGP_SPRETEiJ_G0019220	Tdp2	94	49.864	ENSMZEG00005003950	tdp2b	98	49.864	Maylandia_zebra
MGP_SPRETEiJ_G0019220	Tdp2	67	46.768	ENSMZEG00005003980	-	85	46.768	Maylandia_zebra
MGP_SPRETEiJ_G0019220	Tdp2	69	50.379	ENSMZEG00005004103	tdp2b	88	50.379	Maylandia_zebra
MGP_SPRETEiJ_G0019220	Tdp2	98	58.470	ENSMGAG00000008014	TDP2	98	59.239	Meleagris_gallopavo
MGP_SPRETEiJ_G0019220	Tdp2	100	84.946	ENSMAUG00000014451	Tdp2	100	85.333	Mesocricetus_auratus
MGP_SPRETEiJ_G0019220	Tdp2	93	67.898	ENSMICG00000000039	TDP2	94	74.460	Microcebus_murinus
MGP_SPRETEiJ_G0019220	Tdp2	100	83.871	ENSMOCG00000002823	Tdp2	100	84.000	Microtus_ochrogaster
MGP_SPRETEiJ_G0019220	Tdp2	84	59.006	ENSMODG00000011653	TDP2	96	57.716	Monodelphis_domestica
MGP_SPRETEiJ_G0019220	Tdp2	66	52.400	ENSMALG00000005368	-	84	52.400	Monopterus_albus
MGP_SPRETEiJ_G0019220	Tdp2	100	96.237	MGP_CAROLIEiJ_G0018354	Tdp2	100	96.237	Mus_caroli
MGP_SPRETEiJ_G0019220	Tdp2	100	97.849	ENSMUSG00000035958	Tdp2	100	97.849	Mus_musculus
MGP_SPRETEiJ_G0019220	Tdp2	100	91.667	MGP_PahariEiJ_G0019417	Tdp2	100	92.473	Mus_pahari
MGP_SPRETEiJ_G0019220	Tdp2	91	69.388	ENSMPUG00000004516	TDP2	99	68.067	Mustela_putorius_furo
MGP_SPRETEiJ_G0019220	Tdp2	96	61.773	ENSMLUG00000013506	TDP2	100	61.773	Myotis_lucifugus
MGP_SPRETEiJ_G0019220	Tdp2	99	72.849	ENSNGAG00000001375	Tdp2	99	72.849	Nannospalax_galili
MGP_SPRETEiJ_G0019220	Tdp2	92	69.477	ENSNLEG00000002447	TDP2	97	69.477	Nomascus_leucogenys
MGP_SPRETEiJ_G0019220	Tdp2	92	67.429	ENSOPRG00000016299	TDP2	99	67.429	Ochotona_princeps
MGP_SPRETEiJ_G0019220	Tdp2	74	75.899	ENSODEG00000014018	TDP2	95	75.899	Octodon_degus
MGP_SPRETEiJ_G0019220	Tdp2	91	67.930	ENSOCUG00000013773	TDP2	94	67.930	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0019220	Tdp2	68	49.416	ENSORLG00000001661	-	94	49.416	Oryzias_latipes
MGP_SPRETEiJ_G0019220	Tdp2	68	49.416	ENSORLG00020004634	-	94	49.416	Oryzias_latipes_hni
MGP_SPRETEiJ_G0019220	Tdp2	68	44.961	ENSORLG00015008190	-	93	44.961	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0019220	Tdp2	68	50.787	ENSOMEG00000015899	-	93	51.200	Oryzias_melastigma
MGP_SPRETEiJ_G0019220	Tdp2	97	64.658	ENSOGAG00000025303	TDP2	98	64.658	Otolemur_garnettii
MGP_SPRETEiJ_G0019220	Tdp2	91	68.622	ENSPPAG00000029023	TDP2	92	74.820	Pan_paniscus
MGP_SPRETEiJ_G0019220	Tdp2	97	66.116	ENSPPRG00000015398	TDP2	99	66.116	Panthera_pardus
MGP_SPRETEiJ_G0019220	Tdp2	74	75.180	ENSPTIG00000018574	TDP2	95	75.180	Panthera_tigris_altaica
MGP_SPRETEiJ_G0019220	Tdp2	91	68.622	ENSPTRG00000017778	TDP2	91	74.820	Pan_troglodytes
MGP_SPRETEiJ_G0019220	Tdp2	91	69.208	ENSPANG00000017590	TDP2	98	68.571	Papio_anubis
MGP_SPRETEiJ_G0019220	Tdp2	92	49.587	ENSPKIG00000006483	tdp2b	96	49.587	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0019220	Tdp2	77	62.759	ENSPSIG00000004948	TDP2	99	62.759	Pelodiscus_sinensis
MGP_SPRETEiJ_G0019220	Tdp2	100	85.753	ENSPEMG00000001788	Tdp2	100	86.400	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0019220	Tdp2	67	46.067	ENSPMAG00000001570	tdp2b	97	46.067	Petromyzon_marinus
MGP_SPRETEiJ_G0019220	Tdp2	91	58.166	ENSPCIG00000007316	TDP2	99	55.065	Phascolarctos_cinereus
MGP_SPRETEiJ_G0019220	Tdp2	69	49.237	ENSPFOG00000017990	-	93	49.237	Poecilia_formosa
MGP_SPRETEiJ_G0019220	Tdp2	72	47.143	ENSPLAG00000019439	-	87	47.143	Poecilia_latipinna
MGP_SPRETEiJ_G0019220	Tdp2	66	50.800	ENSPMEG00000010824	-	84	50.800	Poecilia_mexicana
MGP_SPRETEiJ_G0019220	Tdp2	91	68.622	ENSPPYG00000016282	TDP2	90	68.091	Pongo_abelii
MGP_SPRETEiJ_G0019220	Tdp2	91	68.235	ENSPCOG00000021415	TDP2	98	74.194	Propithecus_coquereli
MGP_SPRETEiJ_G0019220	Tdp2	69	51.056	ENSPNYG00000011504	tdp2b	92	51.056	Pundamilia_nyererei
MGP_SPRETEiJ_G0019220	Tdp2	94	48.774	ENSPNYG00000011532	tdp2b	98	48.774	Pundamilia_nyererei
MGP_SPRETEiJ_G0019220	Tdp2	66	52.846	ENSPNAG00000022162	tdp2a	63	52.846	Pygocentrus_nattereri
MGP_SPRETEiJ_G0019220	Tdp2	100	86.559	ENSRNOG00000018246	Tdp2	100	86.828	Rattus_norvegicus
MGP_SPRETEiJ_G0019220	Tdp2	91	69.208	ENSRBIG00000037119	TDP2	92	75.540	Rhinopithecus_bieti
MGP_SPRETEiJ_G0019220	Tdp2	91	68.915	ENSRROG00000005025	TDP2	92	75.180	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0019220	Tdp2	96	66.574	ENSSBOG00000028734	TDP2	91	75.540	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0019220	Tdp2	99	57.979	ENSSHAG00000002506	TDP2	99	57.979	Sarcophilus_harrisii
MGP_SPRETEiJ_G0019220	Tdp2	75	49.231	ENSSFOG00015011322	-	73	50.397	Scleropages_formosus
MGP_SPRETEiJ_G0019220	Tdp2	74	70.968	ENSSARG00000013547	TDP2	100	70.968	Sorex_araneus
MGP_SPRETEiJ_G0019220	Tdp2	91	59.429	ENSSPUG00000008288	TDP2	95	59.429	Sphenodon_punctatus
MGP_SPRETEiJ_G0019220	Tdp2	91	68.622	ENSSSCG00000001092	TDP2	98	67.705	Sus_scrofa
MGP_SPRETEiJ_G0019220	Tdp2	68	64.567	ENSTGUG00000009035	TDP2	97	64.567	Taeniopygia_guttata
MGP_SPRETEiJ_G0019220	Tdp2	95	47.671	ENSTRUG00000014347	tdp2b	99	47.671	Takifugu_rubripes
MGP_SPRETEiJ_G0019220	Tdp2	75	48.944	ENSTRUG00000012218	-	95	48.944	Takifugu_rubripes
MGP_SPRETEiJ_G0019220	Tdp2	67	51.172	ENSTNIG00000010260	TDP2	97	51.172	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0019220	Tdp2	95	47.185	ENSTNIG00000017792	tdp2b	100	47.185	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0019220	Tdp2	91	68.035	ENSTTRG00000016376	TDP2	99	65.847	Tursiops_truncatus
MGP_SPRETEiJ_G0019220	Tdp2	93	66.667	ENSUAMG00000025939	TDP2	98	66.667	Ursus_americanus
MGP_SPRETEiJ_G0019220	Tdp2	74	75.357	ENSUMAG00000020111	TDP2	93	75.357	Ursus_maritimus
MGP_SPRETEiJ_G0019220	Tdp2	91	57.062	ENSXETG00000014826	tdp2	95	57.062	Xenopus_tropicalis
MGP_SPRETEiJ_G0019220	Tdp2	69	49.808	ENSXCOG00000010778	-	72	49.808	Xiphophorus_couchianus
MGP_SPRETEiJ_G0019220	Tdp2	68	50.000	ENSXMAG00000022252	-	75	50.193	Xiphophorus_maculatus