EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0019309 (Gene tree)
Gene ID: -
Gene Symbol: Rpp40
Alias: D8Bwg1265e|Rnasep1
Full Name: ribonuclease P 40 subunit
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 12953 bases
Position: chr13:32189683-32202635
Accession: 1346084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0035710	Ribonuc_P_40	PF08584.11	5.6e-93	1	1
MGP_SPRETEiJ_P0035713	Ribonuc_P_40	PF08584.11	3.9e-77	1	1
MGP_SPRETEiJ_P0035711	Ribonuc_P_40	PF08584.11	5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0035711	-	276	-	MGP_SPRETEiJ_P0035711	83 (aa)	-	-
MGP_SPRETEiJ_T0035710	-	4475	-	MGP_SPRETEiJ_P0035710	363 (aa)	-	-
MGP_SPRETEiJ_T0035713	-	1053	-	MGP_SPRETEiJ_P0035713	340 (aa)	-	-
MGP_SPRETEiJ_T0035712	-	3266	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0019309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0019309's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0019309	Rpp40	100	83.747	ENSG00000124787	RPP40	100	83.747	Homo_sapiens
MGP_SPRETEiJ_G0019309	Rpp40	100	86.777	ENSAMEG00000012938	RPP40	100	86.777	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0019309	Rpp40	98	37.255	ENSACIG00000003617	rpp40	98	37.255	Amphilophus_citrinellus
MGP_SPRETEiJ_G0019309	Rpp40	98	36.975	ENSAOCG00000011846	rpp40	99	36.975	Amphiprion_ocellaris
MGP_SPRETEiJ_G0019309	Rpp40	98	36.975	ENSAPEG00000001322	rpp40	99	36.975	Amphiprion_percula
MGP_SPRETEiJ_G0019309	Rpp40	98	38.719	ENSATEG00000006584	rpp40	99	38.997	Anabas_testudineus
MGP_SPRETEiJ_G0019309	Rpp40	77	82.812	ENSAPLG00000005691	RPP40	99	67.550	Anas_platyrhynchos
MGP_SPRETEiJ_G0019309	Rpp40	99	63.231	ENSACAG00000006550	RPP40	88	63.231	Anolis_carolinensis
MGP_SPRETEiJ_G0019309	Rpp40	100	81.267	ENSANAG00000029246	RPP40	100	81.267	Aotus_nancymaae
MGP_SPRETEiJ_G0019309	Rpp40	98	38.873	ENSACLG00000015883	rpp40	96	38.873	Astatotilapia_calliptera
MGP_SPRETEiJ_G0019309	Rpp40	77	71.875	ENSAMXG00000001755	rpp40	99	47.899	Astyanax_mexicanus
MGP_SPRETEiJ_G0019309	Rpp40	100	83.747	ENSBTAG00000003332	RPP40	100	83.747	Bos_taurus
MGP_SPRETEiJ_G0019309	Rpp40	100	82.369	ENSCJAG00000021373	RPP40	100	82.369	Callithrix_jacchus
MGP_SPRETEiJ_G0019309	Rpp40	100	85.675	ENSCAFG00000009435	RPP40	100	85.675	Canis_familiaris
MGP_SPRETEiJ_G0019309	Rpp40	100	85.675	ENSCAFG00020013380	RPP40	100	85.675	Canis_lupus_dingo
MGP_SPRETEiJ_G0019309	Rpp40	100	83.747	ENSCHIG00000016849	RPP40	100	83.747	Capra_hircus
MGP_SPRETEiJ_G0019309	Rpp40	100	86.176	ENSTSYG00000032857	RPP40	100	86.176	Carlito_syrichta
MGP_SPRETEiJ_G0019309	Rpp40	90	77.064	ENSCAPG00000004957	RPP40	98	77.064	Cavia_aperea
MGP_SPRETEiJ_G0019309	Rpp40	100	84.706	ENSCPOG00000005855	RPP40	100	84.706	Cavia_porcellus
MGP_SPRETEiJ_G0019309	Rpp40	100	82.369	ENSCCAG00000019809	RPP40	100	82.369	Cebus_capucinus
MGP_SPRETEiJ_G0019309	Rpp40	100	83.196	ENSCATG00000038787	RPP40	100	83.196	Cercocebus_atys
MGP_SPRETEiJ_G0019309	Rpp40	100	83.529	ENSCLAG00000003235	RPP40	100	83.529	Chinchilla_lanigera
MGP_SPRETEiJ_G0019309	Rpp40	100	83.471	ENSCSAG00000007307	RPP40	100	83.471	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0019309	Rpp40	78	89.231	ENSCHOG00000005856	-	100	65.600	Choloepus_hoffmanni
MGP_SPRETEiJ_G0019309	Rpp40	99	70.000	ENSCPBG00000009003	RPP40	99	70.000	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0019309	Rpp40	100	83.747	ENSCANG00000033965	RPP40	100	83.747	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0019309	Rpp40	100	85.124	ENSCGRG00001018328	Rpp40	100	85.124	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0019309	Rpp40	100	85.124	ENSCGRG00000011344	Rpp40	100	85.124	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0019309	Rpp40	98	35.393	ENSCSEG00000015006	-	98	35.393	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0019309	Rpp40	66	50.909	ENSCVAG00000012169	rpp40	100	34.559	Cyprinodon_variegatus
MGP_SPRETEiJ_G0019309	Rpp40	98	50.000	ENSDARG00000017605	rpp40	99	50.000	Danio_rerio
MGP_SPRETEiJ_G0019309	Rpp40	82	80.135	ENSDNOG00000048136	RPP40	99	80.135	Dasypus_novemcinctus
MGP_SPRETEiJ_G0019309	Rpp40	100	81.818	ENSDORG00000029944	-	100	81.818	Dipodomys_ordii
MGP_SPRETEiJ_G0019309	Rpp40	100	61.662	ENSDORG00000011196	-	100	61.662	Dipodomys_ordii
MGP_SPRETEiJ_G0019309	Rpp40	90	82.022	ENSETEG00000007458	RPP40	85	82.022	Echinops_telfairi
MGP_SPRETEiJ_G0019309	Rpp40	98	45.915	ENSEBUG00000000386	rpp40	99	45.915	Eptatretus_burgeri
MGP_SPRETEiJ_G0019309	Rpp40	100	85.124	ENSEASG00005012116	RPP40	80	85.124	Equus_asinus_asinus
MGP_SPRETEiJ_G0019309	Rpp40	100	85.675	ENSECAG00000017247	RPP40	80	85.675	Equus_caballus
MGP_SPRETEiJ_G0019309	Rpp40	68	85.366	ENSEEUG00000012087	RPP40	100	64.983	Erinaceus_europaeus
MGP_SPRETEiJ_G0019309	Rpp40	98	48.045	ENSELUG00000017004	rpp40	99	48.045	Esox_lucius
MGP_SPRETEiJ_G0019309	Rpp40	100	85.294	ENSFCAG00000009249	RPP40	100	85.294	Felis_catus
MGP_SPRETEiJ_G0019309	Rpp40	77	82.812	ENSFALG00000013166	RPP40	100	64.220	Ficedula_albicollis
MGP_SPRETEiJ_G0019309	Rpp40	100	84.573	ENSFDAG00000013001	-	100	84.573	Fukomys_damarensis
MGP_SPRETEiJ_G0019309	Rpp40	80	67.808	ENSFDAG00000000265	-	99	67.808	Fukomys_damarensis
MGP_SPRETEiJ_G0019309	Rpp40	98	39.216	ENSFHEG00000021429	rpp40	88	39.216	Fundulus_heteroclitus
MGP_SPRETEiJ_G0019309	Rpp40	72	61.667	ENSGMOG00000018653	rpp40	100	39.130	Gadus_morhua
MGP_SPRETEiJ_G0019309	Rpp40	99	65.556	ENSGALG00000036074	RPP40	99	65.556	Gallus_gallus
MGP_SPRETEiJ_G0019309	Rpp40	82	35.570	ENSGAFG00000004189	-	98	35.570	Gambusia_affinis
MGP_SPRETEiJ_G0019309	Rpp40	98	39.776	ENSGACG00000002472	rpp40	99	39.776	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0019309	Rpp40	99	70.556	ENSGAGG00000012918	RPP40	99	70.556	Gopherus_agassizii
MGP_SPRETEiJ_G0019309	Rpp40	100	83.196	ENSGGOG00000013764	RPP40	100	83.196	Gorilla_gorilla
MGP_SPRETEiJ_G0019309	Rpp40	77	53.125	ENSHBUG00000009378	rpp40	93	38.226	Haplochromis_burtoni
MGP_SPRETEiJ_G0019309	Rpp40	100	83.747	ENSHGLG00000004871	RPP40	100	83.747	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0019309	Rpp40	100	84.022	ENSHGLG00100002080	RPP40	100	84.022	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0019309	Rpp40	96	33.046	ENSHCOG00000013264	-	93	33.046	Hippocampus_comes
MGP_SPRETEiJ_G0019309	Rpp40	99	46.944	ENSIPUG00000008951	RPP40	99	46.944	Ictalurus_punctatus
MGP_SPRETEiJ_G0019309	Rpp40	100	84.298	ENSSTOG00000011199	RPP40	100	84.298	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0019309	Rpp40	100	81.765	ENSJJAG00000020629	Rpp40	100	81.765	Jaculus_jaculus
MGP_SPRETEiJ_G0019309	Rpp40	98	36.695	ENSKMAG00000019358	rpp40	99	36.695	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0019309	Rpp40	98	38.936	ENSLBEG00000022724	rpp40	99	38.936	Labrus_bergylta
MGP_SPRETEiJ_G0019309	Rpp40	78	81.538	ENSLACG00000014848	RPP40	99	60.000	Latimeria_chalumnae
MGP_SPRETEiJ_G0019309	Rpp40	100	53.994	ENSLOCG00000011650	rpp40	100	53.994	Lepisosteus_oculatus
MGP_SPRETEiJ_G0019309	Rpp40	78	90.769	ENSLAFG00000007530	RPP40	100	80.528	Loxodonta_africana
MGP_SPRETEiJ_G0019309	Rpp40	100	83.235	ENSMFAG00000043100	RPP40	100	83.235	Macaca_fascicularis
MGP_SPRETEiJ_G0019309	Rpp40	100	82.941	ENSMMUG00000004966	RPP40	100	82.941	Macaca_mulatta
MGP_SPRETEiJ_G0019309	Rpp40	100	83.529	ENSMNEG00000041986	RPP40	100	83.529	Macaca_nemestrina
MGP_SPRETEiJ_G0019309	Rpp40	98	75.224	ENSMLEG00000040851	RPP40	100	81.818	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0019309	Rpp40	98	40.336	ENSMAMG00000019551	rpp40	98	40.336	Mastacembelus_armatus
MGP_SPRETEiJ_G0019309	Rpp40	99	39.335	ENSMZEG00005019475	rpp40	99	39.335	Maylandia_zebra
MGP_SPRETEiJ_G0019309	Rpp40	99	62.222	ENSMGAG00000004009	RPP40	99	62.222	Meleagris_gallopavo
MGP_SPRETEiJ_G0019309	Rpp40	100	88.430	ENSMAUG00000010268	Rpp40	100	88.430	Mesocricetus_auratus
MGP_SPRETEiJ_G0019309	Rpp40	100	84.573	ENSMICG00000003297	RPP40	100	84.412	Microcebus_murinus
MGP_SPRETEiJ_G0019309	Rpp40	100	90.083	ENSMOCG00000000305	Rpp40	100	90.083	Microtus_ochrogaster
MGP_SPRETEiJ_G0019309	Rpp40	98	33.894	ENSMMOG00000020591	-	99	33.894	Mola_mola
MGP_SPRETEiJ_G0019309	Rpp40	100	78.022	ENSMODG00000009826	RPP40	100	78.022	Monodelphis_domestica
MGP_SPRETEiJ_G0019309	Rpp40	98	38.655	ENSMALG00000020133	rpp40	99	39.216	Monopterus_albus
MGP_SPRETEiJ_G0019309	Rpp40	100	100.000	MGP_CAROLIEiJ_G0018429	Rpp40	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0019309	Rpp40	100	100.000	ENSMUSG00000021418	Rpp40	100	99.174	Mus_musculus
MGP_SPRETEiJ_G0019309	Rpp40	100	100.000	MGP_PahariEiJ_G0019497	Rpp40	100	100.000	Mus_pahari
MGP_SPRETEiJ_G0019309	Rpp40	100	86.226	ENSMPUG00000000530	RPP40	93	86.226	Mustela_putorius_furo
MGP_SPRETEiJ_G0019309	Rpp40	100	84.022	ENSMLUG00000000501	RPP40	100	84.022	Myotis_lucifugus
MGP_SPRETEiJ_G0019309	Rpp40	100	87.603	ENSNGAG00000023955	-	100	87.603	Nannospalax_galili
MGP_SPRETEiJ_G0019309	Rpp40	95	78.035	ENSNGAG00000022529	-	100	78.035	Nannospalax_galili
MGP_SPRETEiJ_G0019309	Rpp40	77	53.125	ENSNBRG00000017465	rpp40	86	37.500	Neolamprologus_brichardi
MGP_SPRETEiJ_G0019309	Rpp40	100	82.647	ENSNLEG00000034397	RPP40	100	82.647	Nomascus_leucogenys
MGP_SPRETEiJ_G0019309	Rpp40	100	72.176	ENSMEUG00000005300	RPP40	100	72.176	Notamacropus_eugenii
MGP_SPRETEiJ_G0019309	Rpp40	100	83.471	ENSODEG00000007255	-	100	83.471	Octodon_degus
MGP_SPRETEiJ_G0019309	Rpp40	100	79.890	ENSODEG00000018153	-	100	79.890	Octodon_degus
MGP_SPRETEiJ_G0019309	Rpp40	88	83.278	ENSODEG00000006170	-	100	83.278	Octodon_degus
MGP_SPRETEiJ_G0019309	Rpp40	99	38.781	ENSONIG00000014016	rpp40	99	38.781	Oreochromis_niloticus
MGP_SPRETEiJ_G0019309	Rpp40	83	72.937	ENSOANG00000001200	RPP40	99	72.937	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0019309	Rpp40	99	73.684	ENSOCUG00000000354	RPP40	99	73.684	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0019309	Rpp40	99	35.833	ENSORLG00000008242	-	100	35.833	Oryzias_latipes
MGP_SPRETEiJ_G0019309	Rpp40	99	35.833	ENSORLG00020013745	-	91	35.833	Oryzias_latipes_hni
MGP_SPRETEiJ_G0019309	Rpp40	99	36.111	ENSORLG00015000887	-	100	36.111	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0019309	Rpp40	99	36.842	ENSOMEG00000002747	rpp40	100	36.842	Oryzias_melastigma
MGP_SPRETEiJ_G0019309	Rpp40	100	85.124	ENSOGAG00000006055	RPP40	100	85.124	Otolemur_garnettii
MGP_SPRETEiJ_G0019309	Rpp40	91	81.081	ENSOARG00000018783	RPP40	100	83.168	Ovis_aries
MGP_SPRETEiJ_G0019309	Rpp40	100	82.920	ENSPPAG00000023703	RPP40	100	82.920	Pan_paniscus
MGP_SPRETEiJ_G0019309	Rpp40	100	85.000	ENSPPRG00000005612	RPP40	100	85.000	Panthera_pardus
MGP_SPRETEiJ_G0019309	Rpp40	100	78.378	ENSPTIG00000018847	RPP40	100	78.378	Panthera_tigris_altaica
MGP_SPRETEiJ_G0019309	Rpp40	100	83.196	ENSPTRG00000017690	RPP40	100	83.196	Pan_troglodytes
MGP_SPRETEiJ_G0019309	Rpp40	100	83.471	ENSPANG00000017865	RPP40	100	83.471	Papio_anubis
MGP_SPRETEiJ_G0019309	Rpp40	98	50.559	ENSPKIG00000006311	rpp40	99	50.559	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0019309	Rpp40	77	85.938	ENSPSIG00000007854	RPP40	100	71.171	Pelodiscus_sinensis
MGP_SPRETEiJ_G0019309	Rpp40	92	84.076	ENSPEMG00000020809	Rpp40	91	84.076	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0019309	Rpp40	98	43.089	ENSPMAG00000008412	rpp40	99	48.540	Petromyzon_marinus
MGP_SPRETEiJ_G0019309	Rpp40	100	77.410	ENSPCIG00000010682	RPP40	100	77.410	Phascolarctos_cinereus
MGP_SPRETEiJ_G0019309	Rpp40	98	36.212	ENSPFOG00000011460	rpp40	98	36.212	Poecilia_formosa
MGP_SPRETEiJ_G0019309	Rpp40	98	36.415	ENSPLAG00000001334	rpp40	99	36.415	Poecilia_latipinna
MGP_SPRETEiJ_G0019309	Rpp40	98	36.695	ENSPMEG00000007721	rpp40	99	36.695	Poecilia_mexicana
MGP_SPRETEiJ_G0019309	Rpp40	98	37.535	ENSPREG00000009215	rpp40	99	37.535	Poecilia_reticulata
MGP_SPRETEiJ_G0019309	Rpp40	100	83.471	ENSPPYG00000016194	RPP40	100	83.471	Pongo_abelii
MGP_SPRETEiJ_G0019309	Rpp40	51	83.696	ENSPCAG00000002700	-	99	83.696	Procavia_capensis
MGP_SPRETEiJ_G0019309	Rpp40	100	85.950	ENSPCOG00000003907	RPP40	100	85.950	Propithecus_coquereli
MGP_SPRETEiJ_G0019309	Rpp40	100	84.022	ENSPVAG00000011325	RPP40	100	84.022	Pteropus_vampyrus
MGP_SPRETEiJ_G0019309	Rpp40	77	53.125	ENSPNYG00000004432	rpp40	98	38.255	Pundamilia_nyererei
MGP_SPRETEiJ_G0019309	Rpp40	98	46.648	ENSPNAG00000019125	rpp40	99	46.648	Pygocentrus_nattereri
MGP_SPRETEiJ_G0019309	Rpp40	100	93.388	ENSRNOG00000016226	Rpp40	100	93.388	Rattus_norvegicus
MGP_SPRETEiJ_G0019309	Rpp40	100	83.747	ENSRBIG00000035800	RPP40	100	83.747	Rhinopithecus_bieti
MGP_SPRETEiJ_G0019309	Rpp40	100	83.747	ENSRROG00000039116	RPP40	100	83.747	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0019309	Rpp40	100	82.094	ENSSBOG00000020297	RPP40	100	82.094	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0019309	Rpp40	100	53.906	ENSSHAG00000002102	RPP40	100	75.180	Sarcophilus_harrisii
MGP_SPRETEiJ_G0019309	Rpp40	99	49.862	ENSSFOG00015001142	rpp40	81	49.862	Scleropages_formosus
MGP_SPRETEiJ_G0019309	Rpp40	98	38.655	ENSSDUG00000007202	rpp40	99	38.655	Seriola_dumerili
MGP_SPRETEiJ_G0019309	Rpp40	98	38.936	ENSSLDG00000017563	rpp40	99	38.936	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0019309	Rpp40	77	79.688	ENSSPUG00000018950	-	100	66.102	Sphenodon_punctatus
MGP_SPRETEiJ_G0019309	Rpp40	99	67.778	ENSSPUG00000017487	-	99	67.778	Sphenodon_punctatus
MGP_SPRETEiJ_G0019309	Rpp40	98	38.375	ENSSPAG00000022716	rpp40	99	38.375	Stegastes_partitus
MGP_SPRETEiJ_G0019309	Rpp40	100	80.992	ENSSSCG00000000998	RPP40	100	80.992	Sus_scrofa
MGP_SPRETEiJ_G0019309	Rpp40	99	66.201	ENSTGUG00000002258	-	100	66.201	Taeniopygia_guttata
MGP_SPRETEiJ_G0019309	Rpp40	77	82.812	ENSTGUG00000015246	-	100	69.492	Taeniopygia_guttata
MGP_SPRETEiJ_G0019309	Rpp40	98	39.776	ENSTRUG00000003755	rpp40	99	39.776	Takifugu_rubripes
MGP_SPRETEiJ_G0019309	Rpp40	99	38.056	ENSTNIG00000003077	rpp40	99	38.056	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0019309	Rpp40	100	57.031	ENSTBEG00000014467	-	73	58.400	Tupaia_belangeri
MGP_SPRETEiJ_G0019309	Rpp40	99	77.624	ENSTTRG00000007319	RPP40	100	77.624	Tursiops_truncatus
MGP_SPRETEiJ_G0019309	Rpp40	100	86.501	ENSUAMG00000002159	RPP40	100	86.501	Ursus_americanus
MGP_SPRETEiJ_G0019309	Rpp40	100	86.501	ENSUMAG00000018639	RPP40	94	86.501	Ursus_maritimus
MGP_SPRETEiJ_G0019309	Rpp40	81	62.245	ENSVPAG00000004652	-	99	62.245	Vicugna_pacos
MGP_SPRETEiJ_G0019309	Rpp40	100	84.848	ENSVVUG00000005451	RPP40	100	84.848	Vulpes_vulpes
MGP_SPRETEiJ_G0019309	Rpp40	99	54.722	ENSXETG00000017617	rpp40	100	54.247	Xenopus_tropicalis
MGP_SPRETEiJ_G0019309	Rpp40	77	39.062	ENSXCOG00000019991	-	86	32.174	Xiphophorus_couchianus
MGP_SPRETEiJ_G0019309	Rpp40	99	33.048	ENSXMAG00000024940	rpp40	99	33.048	Xiphophorus_maculatus