EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0019363 (Gene tree)
Gene ID: -
Gene Symbol: Nup153
Alias: B130015D15Rik
Full Name: nucleoporin 153
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 47315 bases
Position: chr13:43437239-43484553
Accession: 2385621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0035858	zf-RanBP	PF00641.18	1.5e-40	1	4
MGP_SPRETEiJ_P0035858	zf-RanBP	PF00641.18	1.5e-40	2	4
MGP_SPRETEiJ_P0035858	zf-RanBP	PF00641.18	1.5e-40	3	4
MGP_SPRETEiJ_P0035858	zf-RanBP	PF00641.18	1.5e-40	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0035862	-	767	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0035861	-	716	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0035860	-	560	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0035858	-	6111	-	MGP_SPRETEiJ_P0035858	1462 (aa)	-	-
MGP_SPRETEiJ_T0035859	-	605	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0019363's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0019363's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0019363	Nup153	100	82.150	ENSG00000124789	NUP153	100	81.947	Homo_sapiens
MGP_SPRETEiJ_G0019363	Nup153	59	47.140	ENSAPOG00000019495	nup153	99	40.631	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0019363	Nup153	99	79.660	ENSAMEG00000000721	NUP153	100	79.582	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0019363	Nup153	99	40.206	ENSACIG00000010784	nup153	80	42.683	Amphilophus_citrinellus
MGP_SPRETEiJ_G0019363	Nup153	59	47.996	ENSAOCG00000007098	nup153	99	38.980	Amphiprion_ocellaris
MGP_SPRETEiJ_G0019363	Nup153	99	39.475	ENSAPEG00000012075	nup153	99	39.757	Amphiprion_percula
MGP_SPRETEiJ_G0019363	Nup153	59	47.408	ENSATEG00000014134	nup153	99	40.820	Anabas_testudineus
MGP_SPRETEiJ_G0019363	Nup153	98	53.727	ENSACAG00000004118	NUP153	100	53.965	Anolis_carolinensis
MGP_SPRETEiJ_G0019363	Nup153	100	82.082	ENSANAG00000001808	NUP153	100	81.812	Aotus_nancymaae
MGP_SPRETEiJ_G0019363	Nup153	77	42.971	ENSACLG00000016592	nup153	98	41.021	Astatotilapia_calliptera
MGP_SPRETEiJ_G0019363	Nup153	99	37.793	ENSAMXG00000021025	nup153	99	41.131	Astyanax_mexicanus
MGP_SPRETEiJ_G0019363	Nup153	99	81.186	ENSBTAG00000017128	NUP153	99	80.777	Bos_taurus
MGP_SPRETEiJ_G0019363	Nup153	99	82.594	ENSCJAG00000006685	NUP153	100	81.947	Callithrix_jacchus
MGP_SPRETEiJ_G0019363	Nup153	100	80.014	ENSCAFG00000010146	NUP153	100	80.967	Canis_familiaris
MGP_SPRETEiJ_G0019363	Nup153	100	80.621	ENSCAFG00020010901	NUP153	100	81.364	Canis_lupus_dingo
MGP_SPRETEiJ_G0019363	Nup153	99	81.446	ENSCHIG00000023764	NUP153	99	80.969	Capra_hircus
MGP_SPRETEiJ_G0019363	Nup153	97	81.402	ENSTSYG00000001251	NUP153	98	80.916	Carlito_syrichta
MGP_SPRETEiJ_G0019363	Nup153	99	79.372	ENSCPOG00000004007	NUP153	99	78.893	Cavia_porcellus
MGP_SPRETEiJ_G0019363	Nup153	99	79.440	ENSCCAG00000024038	NUP153	100	79.820	Cebus_capucinus
MGP_SPRETEiJ_G0019363	Nup153	99	82.389	ENSCATG00000041429	NUP153	100	82.082	Cercocebus_atys
MGP_SPRETEiJ_G0019363	Nup153	99	80.451	ENSCLAG00000001915	NUP153	99	80.383	Chinchilla_lanigera
MGP_SPRETEiJ_G0019363	Nup153	100	82.409	ENSCSAG00000007624	NUP153	100	82.003	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0019363	Nup153	62	53.196	ENSCHOG00000009608	-	97	52.381	Choloepus_hoffmanni
MGP_SPRETEiJ_G0019363	Nup153	86	56.583	ENSCHOG00000008316	-	99	56.426	Choloepus_hoffmanni
MGP_SPRETEiJ_G0019363	Nup153	79	56.426	ENSCHOG00000007137	-	99	56.255	Choloepus_hoffmanni
MGP_SPRETEiJ_G0019363	Nup153	86	56.863	ENSCHOG00000003510	-	99	56.627	Choloepus_hoffmanni
MGP_SPRETEiJ_G0019363	Nup153	58	62.446	ENSCHOG00000013388	-	99	61.583	Choloepus_hoffmanni
MGP_SPRETEiJ_G0019363	Nup153	99	63.698	ENSCPBG00000008333	NUP153	99	63.090	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0019363	Nup153	99	78.908	ENSCANG00000033390	NUP153	100	78.634	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0019363	Nup153	99	90.234	ENSCGRG00001021016	Nup153	100	90.463	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0019363	Nup153	97	90.077	ENSCGRG00000009244	Nup153	100	90.496	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0019363	Nup153	99	40.472	ENSCSEG00000017912	nup153	98	41.184	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0019363	Nup153	90	39.959	ENSCVAG00000020646	nup153	98	39.240	Cyprinodon_variegatus
MGP_SPRETEiJ_G0019363	Nup153	99	41.404	ENSDARG00000099972	nup153	99	41.424	Danio_rerio
MGP_SPRETEiJ_G0019363	Nup153	99	80.191	ENSDNOG00000001153	NUP153	99	80.055	Dasypus_novemcinctus
MGP_SPRETEiJ_G0019363	Nup153	99	81.365	ENSDORG00000001736	Nup153	100	81.542	Dipodomys_ordii
MGP_SPRETEiJ_G0019363	Nup153	79	87.059	ENSETEG00000010324	-	76	87.059	Echinops_telfairi
MGP_SPRETEiJ_G0019363	Nup153	100	81.394	ENSEASG00005009945	NUP153	100	81.326	Equus_asinus_asinus
MGP_SPRETEiJ_G0019363	Nup153	100	81.326	ENSECAG00000016010	NUP153	100	81.258	Equus_caballus
MGP_SPRETEiJ_G0019363	Nup153	73	87.458	ENSEEUG00000010183	NUP153	75	86.441	Erinaceus_europaeus
MGP_SPRETEiJ_G0019363	Nup153	99	40.810	ENSELUG00000019108	nup153	99	40.654	Esox_lucius
MGP_SPRETEiJ_G0019363	Nup153	99	80.693	ENSFCAG00000011583	NUP153	100	80.135	Felis_catus
MGP_SPRETEiJ_G0019363	Nup153	95	57.787	ENSFALG00000013388	NUP153	99	57.817	Ficedula_albicollis
MGP_SPRETEiJ_G0019363	Nup153	92	50.355	ENSFHEG00000013401	nup153	99	50.119	Fundulus_heteroclitus
MGP_SPRETEiJ_G0019363	Nup153	77	44.834	ENSGMOG00000010422	nup153	81	45.393	Gadus_morhua
MGP_SPRETEiJ_G0019363	Nup153	99	62.153	ENSGALG00000012720	NUP153	99	61.679	Gallus_gallus
MGP_SPRETEiJ_G0019363	Nup153	99	39.413	ENSGAFG00000010927	nup153	99	39.302	Gambusia_affinis
MGP_SPRETEiJ_G0019363	Nup153	99	40.603	ENSGACG00000005389	nup153	99	40.831	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0019363	Nup153	99	63.385	ENSGAGG00000022386	NUP153	99	63.048	Gopherus_agassizii
MGP_SPRETEiJ_G0019363	Nup153	100	81.406	ENSGGOG00000014261	NUP153	100	81.001	Gorilla_gorilla
MGP_SPRETEiJ_G0019363	Nup153	77	42.857	ENSHBUG00000002944	nup153	98	40.938	Haplochromis_burtoni
MGP_SPRETEiJ_G0019363	Nup153	99	80.082	ENSHGLG00000007924	NUP153	99	79.808	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0019363	Nup153	99	80.082	ENSHGLG00100001529	NUP153	99	79.808	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0019363	Nup153	99	38.638	ENSHCOG00000019361	nup153	99	39.181	Hippocampus_comes
MGP_SPRETEiJ_G0019363	Nup153	99	42.035	ENSIPUG00000014605	nup153	99	41.432	Ictalurus_punctatus
MGP_SPRETEiJ_G0019363	Nup153	97	81.894	ENSSTOG00000005807	NUP153	100	81.058	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0019363	Nup153	99	81.181	ENSJJAG00000016760	Nup153	99	81.113	Jaculus_jaculus
MGP_SPRETEiJ_G0019363	Nup153	99	40.000	ENSKMAG00000006344	nup153	99	40.300	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0019363	Nup153	99	39.616	ENSLBEG00000002982	nup153	98	40.353	Labrus_bergylta
MGP_SPRETEiJ_G0019363	Nup153	98	45.070	ENSLACG00000006480	NUP153	100	44.691	Latimeria_chalumnae
MGP_SPRETEiJ_G0019363	Nup153	99	45.841	ENSLOCG00000008267	nup153	99	45.378	Lepisosteus_oculatus
MGP_SPRETEiJ_G0019363	Nup153	99	80.027	ENSLAFG00000015905	NUP153	99	79.414	Loxodonta_africana
MGP_SPRETEiJ_G0019363	Nup153	99	82.526	ENSMFAG00000045732	NUP153	100	82.218	Macaca_fascicularis
MGP_SPRETEiJ_G0019363	Nup153	99	82.457	ENSMMUG00000001993	NUP153	100	82.150	Macaca_mulatta
MGP_SPRETEiJ_G0019363	Nup153	99	82.526	ENSMNEG00000038011	NUP153	100	82.218	Macaca_nemestrina
MGP_SPRETEiJ_G0019363	Nup153	99	82.389	ENSMLEG00000030776	NUP153	100	82.082	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0019363	Nup153	99	39.506	ENSMAMG00000013184	nup153	98	40.812	Mastacembelus_armatus
MGP_SPRETEiJ_G0019363	Nup153	77	42.326	ENSMZEG00005004371	nup153	99	39.885	Maylandia_zebra
MGP_SPRETEiJ_G0019363	Nup153	98	60.507	ENSMGAG00000003139	NUP153	100	60.867	Meleagris_gallopavo
MGP_SPRETEiJ_G0019363	Nup153	99	89.141	ENSMAUG00000007737	Nup153	99	89.378	Mesocricetus_auratus
MGP_SPRETEiJ_G0019363	Nup153	100	82.453	ENSMICG00000006089	NUP153	100	82.588	Microcebus_murinus
MGP_SPRETEiJ_G0019363	Nup153	99	88.912	ENSMOCG00000007623	Nup153	99	88.636	Microtus_ochrogaster
MGP_SPRETEiJ_G0019363	Nup153	99	38.011	ENSMMOG00000019049	nup153	99	38.630	Mola_mola
MGP_SPRETEiJ_G0019363	Nup153	97	69.966	ENSMODG00000010951	NUP153	99	69.305	Monodelphis_domestica
MGP_SPRETEiJ_G0019363	Nup153	62	46.597	ENSMALG00000013995	nup153	99	40.801	Monopterus_albus
MGP_SPRETEiJ_G0019363	Nup153	100	98.020	MGP_CAROLIEiJ_G0018483	Nup153	100	98.020	Mus_caroli
MGP_SPRETEiJ_G0019363	Nup153	100	98.701	ENSMUSG00000021374	Nup153	100	98.701	Mus_musculus
MGP_SPRETEiJ_G0019363	Nup153	100	97.404	MGP_PahariEiJ_G0019551	Nup153	100	97.404	Mus_pahari
MGP_SPRETEiJ_G0019363	Nup153	100	78.614	ENSMLUG00000004775	NUP153	100	78.482	Myotis_lucifugus
MGP_SPRETEiJ_G0019363	Nup153	100	83.514	ENSNGAG00000013817	Nup153	99	83.356	Nannospalax_galili
MGP_SPRETEiJ_G0019363	Nup153	77	41.128	ENSNBRG00000012456	nup153	99	38.949	Neolamprologus_brichardi
MGP_SPRETEiJ_G0019363	Nup153	99	82.196	ENSNLEG00000001141	NUP153	100	81.892	Nomascus_leucogenys
MGP_SPRETEiJ_G0019363	Nup153	83	88.889	ENSMEUG00000012874	NUP153	79	88.889	Notamacropus_eugenii
MGP_SPRETEiJ_G0019363	Nup153	86	74.768	ENSOPRG00000006221	NUP153	87	74.975	Ochotona_princeps
MGP_SPRETEiJ_G0019363	Nup153	99	76.008	ENSODEG00000005620	NUP153	99	75.871	Octodon_degus
MGP_SPRETEiJ_G0019363	Nup153	99	41.572	ENSONIG00000002524	nup153	99	41.964	Oreochromis_niloticus
MGP_SPRETEiJ_G0019363	Nup153	97	63.395	ENSOANG00000011858	NUP153	99	63.878	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0019363	Nup153	99	77.763	ENSOCUG00000003064	NUP153	100	77.230	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0019363	Nup153	99	39.065	ENSORLG00000012674	nup153	99	40.837	Oryzias_latipes
MGP_SPRETEiJ_G0019363	Nup153	99	39.495	ENSORLG00020006026	nup153	98	40.149	Oryzias_latipes_hni
MGP_SPRETEiJ_G0019363	Nup153	99	39.382	ENSORLG00015013823	nup153	98	40.248	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0019363	Nup153	99	39.603	ENSOMEG00000012062	nup153	99	40.424	Oryzias_melastigma
MGP_SPRETEiJ_G0019363	Nup153	100	80.423	ENSOGAG00000014899	NUP153	99	80.240	Otolemur_garnettii
MGP_SPRETEiJ_G0019363	Nup153	99	79.374	ENSOARG00000011514	NUP153	100	79.101	Ovis_aries
MGP_SPRETEiJ_G0019363	Nup153	100	82.488	ENSPPAG00000029729	NUP153	100	82.082	Pan_paniscus
MGP_SPRETEiJ_G0019363	Nup153	99	80.218	ENSPPRG00000006160	NUP153	100	79.933	Panthera_pardus
MGP_SPRETEiJ_G0019363	Nup153	99	79.742	ENSPTIG00000017212	NUP153	100	79.461	Panthera_tigris_altaica
MGP_SPRETEiJ_G0019363	Nup153	100	82.556	ENSPTRG00000017752	NUP153	100	82.150	Pan_troglodytes
MGP_SPRETEiJ_G0019363	Nup153	99	82.526	ENSPANG00000015139	NUP153	100	82.218	Papio_anubis
MGP_SPRETEiJ_G0019363	Nup153	99	40.572	ENSPKIG00000001734	nup153	74	42.869	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0019363	Nup153	98	62.792	ENSPSIG00000017226	NUP153	100	62.242	Pelodiscus_sinensis
MGP_SPRETEiJ_G0019363	Nup153	99	40.462	ENSPMGG00000001716	nup153	99	39.589	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0019363	Nup153	100	90.265	ENSPEMG00000020772	Nup153	100	90.538	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0019363	Nup153	57	35.878	ENSPMAG00000002487	-	100	35.399	Petromyzon_marinus
MGP_SPRETEiJ_G0019363	Nup153	99	69.314	ENSPCIG00000029680	NUP153	99	69.636	Phascolarctos_cinereus
MGP_SPRETEiJ_G0019363	Nup153	99	40.039	ENSPFOG00000013146	nup153	99	40.570	Poecilia_formosa
MGP_SPRETEiJ_G0019363	Nup153	99	40.113	ENSPMEG00000021677	nup153	98	39.259	Poecilia_mexicana
MGP_SPRETEiJ_G0019363	Nup153	99	40.124	ENSPREG00000007463	nup153	98	39.888	Poecilia_reticulata
MGP_SPRETEiJ_G0019363	Nup153	99	79.727	ENSPPYG00000016259	NUP153	100	78.634	Pongo_abelii
MGP_SPRETEiJ_G0019363	Nup153	75	95.833	ENSPCAG00000010444	NUP153	75	95.833	Procavia_capensis
MGP_SPRETEiJ_G0019363	Nup153	99	80.096	ENSPCOG00000014488	NUP153	100	79.946	Propithecus_coquereli
MGP_SPRETEiJ_G0019363	Nup153	94	78.921	ENSPVAG00000012632	NUP153	99	78.093	Pteropus_vampyrus
MGP_SPRETEiJ_G0019363	Nup153	99	39.847	ENSPNYG00000011225	nup153	99	40.549	Pundamilia_nyererei
MGP_SPRETEiJ_G0019363	Nup153	99	40.729	ENSPNAG00000024377	nup153	99	40.834	Pygocentrus_nattereri
MGP_SPRETEiJ_G0019363	Nup153	99	93.737	ENSRNOG00000001456	Nup153	99	93.599	Rattus_norvegicus
MGP_SPRETEiJ_G0019363	Nup153	100	81.132	ENSRBIG00000041878	NUP153	100	81.288	Rhinopithecus_bieti
MGP_SPRETEiJ_G0019363	Nup153	99	81.849	ENSRROG00000029849	NUP153	100	81.875	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0019363	Nup153	100	82.759	ENSSBOG00000024532	NUP153	100	82.353	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0019363	Nup153	61	65.827	ENSSHAG00000016087	-	97	66.007	Sarcophilus_harrisii
MGP_SPRETEiJ_G0019363	Nup153	99	40.965	ENSSFOG00015011040	nup153	99	41.522	Scleropages_formosus
MGP_SPRETEiJ_G0019363	Nup153	99	39.171	ENSSMAG00000008418	nup153	98	40.135	Scophthalmus_maximus
MGP_SPRETEiJ_G0019363	Nup153	59	47.722	ENSSDUG00000010779	nup153	99	40.434	Seriola_dumerili
MGP_SPRETEiJ_G0019363	Nup153	59	47.392	ENSSLDG00000012692	nup153	78	42.295	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0019363	Nup153	97	71.895	ENSSARG00000013269	NUP153	100	72.450	Sorex_araneus
MGP_SPRETEiJ_G0019363	Nup153	99	61.471	ENSSPUG00000016687	NUP153	98	60.729	Sphenodon_punctatus
MGP_SPRETEiJ_G0019363	Nup153	63	46.806	ENSSPAG00000014945	nup153	98	39.951	Stegastes_partitus
MGP_SPRETEiJ_G0019363	Nup153	99	81.340	ENSSSCG00000026034	NUP153	100	81.449	Sus_scrofa
MGP_SPRETEiJ_G0019363	Nup153	97	58.562	ENSTGUG00000005917	NUP153	100	58.425	Taeniopygia_guttata
MGP_SPRETEiJ_G0019363	Nup153	99	39.405	ENSTRUG00000010163	nup153	99	38.714	Takifugu_rubripes
MGP_SPRETEiJ_G0019363	Nup153	99	39.530	ENSTNIG00000009182	nup153	99	40.013	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0019363	Nup153	67	79.603	ENSTBEG00000004161	NUP153	68	80.170	Tupaia_belangeri
MGP_SPRETEiJ_G0019363	Nup153	88	78.623	ENSTTRG00000007060	NUP153	89	80.231	Tursiops_truncatus
MGP_SPRETEiJ_G0019363	Nup153	61	75.991	ENSUAMG00000015215	NUP153	98	75.881	Ursus_americanus
MGP_SPRETEiJ_G0019363	Nup153	98	76.881	ENSUMAG00000017135	NUP153	99	76.381	Ursus_maritimus
MGP_SPRETEiJ_G0019363	Nup153	100	82.488	ENSVPAG00000002072	NUP153	100	82.285	Vicugna_pacos
MGP_SPRETEiJ_G0019363	Nup153	100	80.891	ENSVVUG00000003265	NUP153	100	81.094	Vulpes_vulpes
MGP_SPRETEiJ_G0019363	Nup153	99	46.707	ENSXETG00000014197	nup153	99	46.325	Xenopus_tropicalis
MGP_SPRETEiJ_G0019363	Nup153	99	39.721	ENSXCOG00000020098	nup153	99	39.771	Xiphophorus_couchianus
MGP_SPRETEiJ_G0019363	Nup153	99	40.365	ENSXMAG00000003437	nup153	98	39.467	Xiphophorus_maculatus