EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0019399 (Gene tree)
Gene ID: -
Gene Symbol: Secisbp2
Alias: 2210413N07Rik|2810012K13Rik|SBP2
Full Name: SECIS binding protein 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 37413 bases
Position: chr13:48925411-48962823
Accession: 1922670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0035970	Ribosomal_L7Ae	PF01248.26	1.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0035975	-	799	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0035974	-	751	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0035971	-	1918	-	MGP_SPRETEiJ_P0035971	414 (aa)	-	-
MGP_SPRETEiJ_T0035970	-	3343	-	MGP_SPRETEiJ_P0035970	863 (aa)	-	-
MGP_SPRETEiJ_T0035973	-	556	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0035972	-	604	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0019399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0019399's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.857	ENSG00000187742	SECISBP2	100	71.857	Homo_sapiens
MGP_SPRETEiJ_G0019399	Secisbp2	98	66.394	ENSAMEG00000003349	SECISBP2	98	66.394	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0019399	Secisbp2	51	49.170	ENSAOCG00000019052	secisbp2	59	48.857	Amphiprion_ocellaris
MGP_SPRETEiJ_G0019399	Secisbp2	51	48.240	ENSAPEG00000012971	secisbp2	59	48.340	Amphiprion_percula
MGP_SPRETEiJ_G0019399	Secisbp2	53	47.515	ENSATEG00000001095	secisbp2	62	47.723	Anabas_testudineus
MGP_SPRETEiJ_G0019399	Secisbp2	98	40.894	ENSAPLG00000013053	SECISBP2	99	40.782	Anas_platyrhynchos
MGP_SPRETEiJ_G0019399	Secisbp2	92	42.873	ENSACAG00000016594	SECISBP2	95	42.242	Anolis_carolinensis
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.363	ENSANAG00000028208	SECISBP2	100	71.363	Aotus_nancymaae
MGP_SPRETEiJ_G0019399	Secisbp2	53	47.809	ENSACLG00000019976	secisbp2	62	48.008	Astatotilapia_calliptera
MGP_SPRETEiJ_G0019399	Secisbp2	53	48.521	ENSAMXG00000015953	secisbp2	62	48.713	Astyanax_mexicanus
MGP_SPRETEiJ_G0019399	Secisbp2	100	67.126	ENSBTAG00000001939	SECISBP2	100	74.008	Bos_taurus
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.363	ENSCJAG00000007806	SECISBP2	100	71.478	Callithrix_jacchus
MGP_SPRETEiJ_G0019399	Secisbp2	100	68.391	ENSCAFG00000002188	SECISBP2	100	68.966	Canis_familiaris
MGP_SPRETEiJ_G0019399	Secisbp2	98	68.538	ENSCAFG00020007224	SECISBP2	98	69.123	Canis_lupus_dingo
MGP_SPRETEiJ_G0019399	Secisbp2	100	66.782	ENSCHIG00000010657	SECISBP2	99	66.782	Capra_hircus
MGP_SPRETEiJ_G0019399	Secisbp2	89	65.039	ENSTSYG00000014119	SECISBP2	97	66.623	Carlito_syrichta
MGP_SPRETEiJ_G0019399	Secisbp2	92	76.862	ENSCAPG00000008522	SECISBP2	99	76.862	Cavia_aperea
MGP_SPRETEiJ_G0019399	Secisbp2	100	68.129	ENSCPOG00000014270	SECISBP2	100	68.743	Cavia_porcellus
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.709	ENSCCAG00000013350	SECISBP2	100	71.709	Cebus_capucinus
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.889	ENSCATG00000008304	SECISBP2	100	71.889	Cercocebus_atys
MGP_SPRETEiJ_G0019399	Secisbp2	100	69.896	ENSCLAG00000001166	SECISBP2	96	70.012	Chinchilla_lanigera
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.626	ENSCSAG00000007310	SECISBP2	100	71.626	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0019399	Secisbp2	85	72.727	ENSCHOG00000011084	SECISBP2	83	72.727	Choloepus_hoffmanni
MGP_SPRETEiJ_G0019399	Secisbp2	53	52.372	ENSCPBG00000005608	SECISBP2	99	52.381	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0019399	Secisbp2	100	65.975	ENSCANG00000034551	SECISBP2	100	70.426	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0019399	Secisbp2	100	82.966	ENSCGRG00001013930	Secisbp2	100	82.966	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0019399	Secisbp2	100	83.082	ENSCGRG00000002600	Secisbp2	100	83.082	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0019399	Secisbp2	53	49.064	ENSCVAG00000015876	secisbp2	58	49.359	Cyprinodon_variegatus
MGP_SPRETEiJ_G0019399	Secisbp2	54	49.393	ENSDARG00000073892	secisbp2	85	49.287	Danio_rerio
MGP_SPRETEiJ_G0019399	Secisbp2	100	67.894	ENSDNOG00000009432	SECISBP2	100	68.470	Dasypus_novemcinctus
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.792	ENSDORG00000023182	Secisbp2	100	71.676	Dipodomys_ordii
MGP_SPRETEiJ_G0019399	Secisbp2	93	72.727	ENSETEG00000001262	SECISBP2	92	72.727	Echinops_telfairi
MGP_SPRETEiJ_G0019399	Secisbp2	100	68.671	ENSEASG00005013960	SECISBP2	100	68.555	Equus_asinus_asinus
MGP_SPRETEiJ_G0019399	Secisbp2	100	68.902	ENSECAG00000015868	SECISBP2	100	68.786	Equus_caballus
MGP_SPRETEiJ_G0019399	Secisbp2	100	60.964	ENSEEUG00000004400	SECISBP2	100	61.316	Erinaceus_europaeus
MGP_SPRETEiJ_G0019399	Secisbp2	100	66.012	ENSFCAG00000004214	SECISBP2	100	66.513	Felis_catus
MGP_SPRETEiJ_G0019399	Secisbp2	55	51.782	ENSFALG00000012441	SECISBP2	57	52.068	Ficedula_albicollis
MGP_SPRETEiJ_G0019399	Secisbp2	100	69.329	ENSFDAG00000021183	SECISBP2	96	69.444	Fukomys_damarensis
MGP_SPRETEiJ_G0019399	Secisbp2	53	45.898	ENSFHEG00000004095	secisbp2	63	45.098	Fundulus_heteroclitus
MGP_SPRETEiJ_G0019399	Secisbp2	52	46.843	ENSGAFG00000016947	secisbp2	60	45.791	Gambusia_affinis
MGP_SPRETEiJ_G0019399	Secisbp2	53	50.641	ENSGACG00000013757	secisbp2	75	50.214	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0019399	Secisbp2	100	72.171	ENSGGOG00000000453	SECISBP2	100	72.171	Gorilla_gorilla
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.181	ENSHGLG00000014380	SECISBP2	96	71.296	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.065	ENSHGLG00100006953	SECISBP2	96	71.181	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0019399	Secisbp2	54	47.525	ENSIPUG00000015393	secisbp2	62	47.327	Ictalurus_punctatus
MGP_SPRETEiJ_G0019399	Secisbp2	100	73.179	ENSSTOG00000000921	SECISBP2	100	72.517	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0019399	Secisbp2	100	70.920	ENSJJAG00000020492	Secisbp2	100	70.920	Jaculus_jaculus
MGP_SPRETEiJ_G0019399	Secisbp2	51	48.847	ENSKMAG00000007129	secisbp2	62	49.372	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0019399	Secisbp2	53	48.633	ENSLBEG00000026023	secisbp2	82	41.061	Labrus_bergylta
MGP_SPRETEiJ_G0019399	Secisbp2	51	53.402	ENSLACG00000005735	SECISBP2	87	52.784	Latimeria_chalumnae
MGP_SPRETEiJ_G0019399	Secisbp2	53	50.615	ENSLOCG00000011742	secisbp2	80	50.103	Lepisosteus_oculatus
MGP_SPRETEiJ_G0019399	Secisbp2	100	64.868	ENSLAFG00000012998	SECISBP2	100	65.327	Loxodonta_africana
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.972	ENSMFAG00000003045	SECISBP2	100	71.972	Macaca_fascicularis
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.972	ENSMMUG00000012532	SECISBP2	100	71.972	Macaca_mulatta
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.972	ENSMNEG00000031737	SECISBP2	100	71.972	Macaca_nemestrina
MGP_SPRETEiJ_G0019399	Secisbp2	100	66.436	ENSMLEG00000028868	SECISBP2	100	71.178	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0019399	Secisbp2	53	47.047	ENSMAMG00000006644	secisbp2	62	47.327	Mastacembelus_armatus
MGP_SPRETEiJ_G0019399	Secisbp2	53	47.809	ENSMZEG00005013614	secisbp2	62	48.008	Maylandia_zebra
MGP_SPRETEiJ_G0019399	Secisbp2	100	81.019	ENSMAUG00000008659	Secisbp2	100	81.019	Mesocricetus_auratus
MGP_SPRETEiJ_G0019399	Secisbp2	100	72.055	ENSMICG00000001176	SECISBP2	100	72.402	Microcebus_murinus
MGP_SPRETEiJ_G0019399	Secisbp2	100	84.589	ENSMOCG00000000616	Secisbp2	100	84.589	Microtus_ochrogaster
MGP_SPRETEiJ_G0019399	Secisbp2	100	52.637	ENSMODG00000013365	SECISBP2	100	52.516	Monodelphis_domestica
MGP_SPRETEiJ_G0019399	Secisbp2	53	47.791	ENSMALG00000004907	secisbp2	90	38.881	Monopterus_albus
MGP_SPRETEiJ_G0019399	Secisbp2	100	96.292	MGP_CAROLIEiJ_G0018518	Secisbp2	100	96.292	Mus_caroli
MGP_SPRETEiJ_G0019399	Secisbp2	100	98.725	ENSMUSG00000035139	Secisbp2	100	98.725	Mus_musculus
MGP_SPRETEiJ_G0019399	Secisbp2	100	93.859	MGP_PahariEiJ_G0019584	Secisbp2	100	93.859	Mus_pahari
MGP_SPRETEiJ_G0019399	Secisbp2	65	69.504	ENSMPUG00000008495	-	100	68.972	Mustela_putorius_furo
MGP_SPRETEiJ_G0019399	Secisbp2	99	65.930	ENSMLUG00000012348	SECISBP2	99	66.047	Myotis_lucifugus
MGP_SPRETEiJ_G0019399	Secisbp2	100	76.968	ENSNGAG00000002364	Secisbp2	100	76.968	Nannospalax_galili
MGP_SPRETEiJ_G0019399	Secisbp2	53	48.000	ENSNBRG00000022804	secisbp2	62	48.200	Neolamprologus_brichardi
MGP_SPRETEiJ_G0019399	Secisbp2	100	66.859	ENSNLEG00000008739	SECISBP2	100	71.644	Nomascus_leucogenys
MGP_SPRETEiJ_G0019399	Secisbp2	96	58.922	ENSOPRG00000007588	SECISBP2	99	58.323	Ochotona_princeps
MGP_SPRETEiJ_G0019399	Secisbp2	100	70.452	ENSODEG00000000675	SECISBP2	100	70.336	Octodon_degus
MGP_SPRETEiJ_G0019399	Secisbp2	53	51.082	ENSONIG00000016931	secisbp2	99	51.244	Oreochromis_niloticus
MGP_SPRETEiJ_G0019399	Secisbp2	100	70.901	ENSOCUG00000012932	SECISBP2	100	70.934	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0019399	Secisbp2	50	49.785	ENSORLG00000000343	secisbp2	69	49.892	Oryzias_latipes
MGP_SPRETEiJ_G0019399	Secisbp2	50	49.356	ENSORLG00020012878	secisbp2	67	49.462	Oryzias_latipes_hni
MGP_SPRETEiJ_G0019399	Secisbp2	50	50.000	ENSORLG00015004559	secisbp2	61	50.108	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0019399	Secisbp2	52	47.992	ENSOMEG00000008595	secisbp2	63	49.788	Oryzias_melastigma
MGP_SPRETEiJ_G0019399	Secisbp2	100	69.630	ENSOGAG00000000317	SECISBP2	97	69.861	Otolemur_garnettii
MGP_SPRETEiJ_G0019399	Secisbp2	100	66.743	ENSOARG00000007741	SECISBP2	100	66.743	Ovis_aries
MGP_SPRETEiJ_G0019399	Secisbp2	100	72.055	ENSPPAG00000012385	SECISBP2	100	72.055	Pan_paniscus
MGP_SPRETEiJ_G0019399	Secisbp2	100	66.012	ENSPPRG00000023911	SECISBP2	100	66.513	Panthera_pardus
MGP_SPRETEiJ_G0019399	Secisbp2	98	59.953	ENSPTIG00000009781	SECISBP2	100	59.459	Panthera_tigris_altaica
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.940	ENSPTRG00000021094	SECISBP2	100	71.940	Pan_troglodytes
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.742	ENSPANG00000024873	SECISBP2	100	71.742	Papio_anubis
MGP_SPRETEiJ_G0019399	Secisbp2	50	51.678	ENSPKIG00000006499	SECISBP2	51	51.116	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0019399	Secisbp2	88	43.062	ENSPSIG00000016257	SECISBP2	96	42.823	Pelodiscus_sinensis
MGP_SPRETEiJ_G0019399	Secisbp2	100	85.747	ENSPEMG00000020212	Secisbp2	100	85.747	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0019399	Secisbp2	100	53.618	ENSPCIG00000010304	SECISBP2	100	53.618	Phascolarctos_cinereus
MGP_SPRETEiJ_G0019399	Secisbp2	52	49.251	ENSPFOG00000008146	secisbp2	74	48.596	Poecilia_formosa
MGP_SPRETEiJ_G0019399	Secisbp2	52	45.657	ENSPMEG00000013702	secisbp2	61	44.807	Poecilia_mexicana
MGP_SPRETEiJ_G0019399	Secisbp2	52	46.721	ENSPREG00000008117	secisbp2	62	45.868	Poecilia_reticulata
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.709	ENSPPYG00000019359	SECISBP2	100	71.709	Pongo_abelii
MGP_SPRETEiJ_G0019399	Secisbp2	79	58.480	ENSPCAG00000000559	-	80	58.515	Procavia_capensis
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.594	ENSPCOG00000013354	SECISBP2	100	71.940	Propithecus_coquereli
MGP_SPRETEiJ_G0019399	Secisbp2	93	67.416	ENSPVAG00000011013	SECISBP2	90	67.416	Pteropus_vampyrus
MGP_SPRETEiJ_G0019399	Secisbp2	53	47.809	ENSPNYG00000016799	secisbp2	62	48.008	Pundamilia_nyererei
MGP_SPRETEiJ_G0019399	Secisbp2	52	45.800	ENSPNAG00000029922	secisbp2	65	46.000	Pygocentrus_nattereri
MGP_SPRETEiJ_G0019399	Secisbp2	100	91.309	ENSRNOG00000013773	Secisbp2	100	91.309	Rattus_norvegicus
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.922	ENSRBIG00000044115	SECISBP2	100	71.922	Rhinopithecus_bieti
MGP_SPRETEiJ_G0019399	Secisbp2	100	71.922	ENSRROG00000030742	SECISBP2	100	71.922	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0019399	Secisbp2	80	78.244	ENSSBOG00000015392	SECISBP2	91	78.244	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0019399	Secisbp2	100	55.278	ENSSHAG00000005947	SECISBP2	100	55.442	Sarcophilus_harrisii
MGP_SPRETEiJ_G0019399	Secisbp2	54	47.059	ENSSFOG00015010409	secisbp2	61	46.255	Scleropages_formosus
MGP_SPRETEiJ_G0019399	Secisbp2	53	47.409	ENSSMAG00000008472	secisbp2	84	40.990	Scophthalmus_maximus
MGP_SPRETEiJ_G0019399	Secisbp2	53	48.221	ENSSDUG00000002089	secisbp2	62	48.560	Seriola_dumerili
MGP_SPRETEiJ_G0019399	Secisbp2	53	48.617	ENSSLDG00000003510	secisbp2	62	48.814	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0019399	Secisbp2	74	97.260	ENSSARG00000012518	-	75	97.260	Sorex_araneus
MGP_SPRETEiJ_G0019399	Secisbp2	88	41.274	ENSSPUG00000009635	SECISBP2	99	40.095	Sphenodon_punctatus
MGP_SPRETEiJ_G0019399	Secisbp2	51	49.693	ENSSPAG00000013606	secisbp2	59	49.284	Stegastes_partitus
MGP_SPRETEiJ_G0019399	Secisbp2	100	68.000	ENSSSCG00000028033	SECISBP2	100	68.114	Sus_scrofa
MGP_SPRETEiJ_G0019399	Secisbp2	54	56.907	ENSTGUG00000000440	SECISBP2	87	56.289	Taeniopygia_guttata
MGP_SPRETEiJ_G0019399	Secisbp2	51	47.510	ENSTRUG00000016835	secisbp2	65	46.888	Takifugu_rubripes
MGP_SPRETEiJ_G0019399	Secisbp2	55	49.793	ENSTNIG00000015576	secisbp2	96	50.636	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0019399	Secisbp2	76	82.979	ENSTBEG00000000288	SECISBP2	77	82.979	Tupaia_belangeri
MGP_SPRETEiJ_G0019399	Secisbp2	100	66.782	ENSTTRG00000003339	SECISBP2	98	67.243	Tursiops_truncatus
MGP_SPRETEiJ_G0019399	Secisbp2	100	66.705	ENSUAMG00000016243	SECISBP2	100	66.705	Ursus_americanus
MGP_SPRETEiJ_G0019399	Secisbp2	98	65.651	ENSUMAG00000016261	SECISBP2	99	65.885	Ursus_maritimus
MGP_SPRETEiJ_G0019399	Secisbp2	95	74.336	ENSVVUG00000022278	SECISBP2	99	66.316	Vulpes_vulpes
MGP_SPRETEiJ_G0019399	Secisbp2	54	51.619	ENSXETG00000029955	SECISBP2	86	51.004	Xenopus_tropicalis
MGP_SPRETEiJ_G0019399	Secisbp2	52	47.314	ENSXMAG00000003090	secisbp2	61	46.458	Xiphophorus_maculatus