EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0019491 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 52616 bases
Position: chr13:57466205-57518820
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0036322	zf-CCHC	PF00098.23	1.1e-13	1	3
MGP_SPRETEiJ_P0036322	zf-CCHC	PF00098.23	1.1e-13	2	3
MGP_SPRETEiJ_P0036322	zf-CCHC	PF00098.23	1.1e-13	3	3
MGP_SPRETEiJ_P0036322	PAP_assoc	PF03828.19	7.7e-28	1	2
MGP_SPRETEiJ_P0036322	PAP_assoc	PF03828.19	7.7e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0036321	-	5076	-	MGP_SPRETEiJ_P0036321	1384 (aa)	-	-
MGP_SPRETEiJ_T0036322	-	5551	-	MGP_SPRETEiJ_P0036322	1473 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0019491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0019491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0019491	-	70	67.442	MGP_SPRETEiJ_G0027237	Tut4	59	58.582

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0019491	-	91	92.231	ENSG00000083223	TUT7	100	95.968	Homo_sapiens
MGP_SPRETEiJ_G0019491	-	66	72.500	ENSAPOG00000012979	TUT7	80	72.500	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0019491	-	99	79.838	ENSAMEG00000004148	TUT7	99	79.771	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0019491	-	66	65.405	ENSAOCG00000004223	-	87	52.727	Amphiprion_ocellaris
MGP_SPRETEiJ_G0019491	-	99	61.883	ENSAPLG00000015510	TUT7	99	61.883	Anas_platyrhynchos
MGP_SPRETEiJ_G0019491	-	58	84.461	ENSACAG00000000279	TUT7	85	84.461	Anolis_carolinensis
MGP_SPRETEiJ_G0019491	-	91	93.233	ENSANAG00000025848	TUT7	98	93.086	Aotus_nancymaae
MGP_SPRETEiJ_G0019491	-	67	70.270	ENSACLG00000018198	TUT7	72	70.270	Astatotilapia_calliptera
MGP_SPRETEiJ_G0019491	-	99	79.743	ENSBTAG00000001737	TUT7	99	79.487	Bos_taurus
MGP_SPRETEiJ_G0019491	-	91	92.982	ENSCJAG00000001845	TUT7	98	92.840	Callithrix_jacchus
MGP_SPRETEiJ_G0019491	-	99	80.730	ENSCAFG00000001331	TUT7	99	80.634	Canis_familiaris
MGP_SPRETEiJ_G0019491	-	99	80.743	ENSCAFG00020023620	TUT7	99	80.743	Canis_lupus_dingo
MGP_SPRETEiJ_G0019491	-	100	80.135	ENSCHIG00000017690	TUT7	100	79.865	Capra_hircus
MGP_SPRETEiJ_G0019491	-	90	92.346	ENSTSYG00000008907	TUT7	98	92.346	Carlito_syrichta
MGP_SPRETEiJ_G0019491	-	99	76.046	ENSCPOG00000002500	TUT7	96	75.911	Cavia_porcellus
MGP_SPRETEiJ_G0019491	-	91	92.481	ENSCATG00000032888	TUT7	98	92.346	Cercocebus_atys
MGP_SPRETEiJ_G0019491	-	99	77.245	ENSCLAG00000007535	TUT7	99	76.975	Chinchilla_lanigera
MGP_SPRETEiJ_G0019491	-	99	79.905	ENSCSAG00000007408	TUT7	99	79.987	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0019491	-	99	74.311	ENSCHOG00000011129	TUT7	99	74.378	Choloepus_hoffmanni
MGP_SPRETEiJ_G0019491	-	99	64.941	ENSCPBG00000005272	TUT7	96	63.416	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0019491	-	91	92.231	ENSCANG00000035790	TUT7	98	92.099	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0019491	-	100	86.721	ENSCGRG00001020605	-	100	86.518	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0019491	-	99	85.772	ENSCGRG00000016585	-	96	85.569	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0019491	-	72	60.034	ENSCSEG00000007068	TUT7	86	59.762	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0019491	-	67	60.259	ENSCVAG00000012526	-	72	60.110	Cyprinodon_variegatus
MGP_SPRETEiJ_G0019491	-	63	63.184	ENSDARG00000074645	CABZ01032476.1	71	63.184	Danio_rerio
MGP_SPRETEiJ_G0019491	-	99	81.711	ENSDNOG00000010663	TUT7	95	81.563	Dasypus_novemcinctus
MGP_SPRETEiJ_G0019491	-	87	73.735	ENSDORG00000009046	-	92	82.915	Dipodomys_ordii
MGP_SPRETEiJ_G0019491	-	93	80.315	ENSETEG00000007739	TUT7	86	82.245	Echinops_telfairi
MGP_SPRETEiJ_G0019491	-	99	80.458	ENSEASG00005020165	TUT7	99	80.391	Equus_asinus_asinus
MGP_SPRETEiJ_G0019491	-	100	80.363	ENSECAG00000014831	TUT7	100	80.296	Equus_caballus
MGP_SPRETEiJ_G0019491	-	99	67.323	ENSEEUG00000012794	TUT7	100	67.074	Erinaceus_europaeus
MGP_SPRETEiJ_G0019491	-	73	61.938	ENSELUG00000013049	-	95	54.483	Esox_lucius
MGP_SPRETEiJ_G0019491	-	92	92.099	ENSFCAG00000003491	TUT7	98	92.099	Felis_catus
MGP_SPRETEiJ_G0019491	-	99	61.063	ENSFALG00000003541	TUT7	99	60.838	Ficedula_albicollis
MGP_SPRETEiJ_G0019491	-	99	77.718	ENSFDAG00000002315	TUT7	96	77.718	Fukomys_damarensis
MGP_SPRETEiJ_G0019491	-	67	62.030	ENSFHEG00000004770	-	70	62.101	Fundulus_heteroclitus
MGP_SPRETEiJ_G0019491	-	64	74.402	ENSGMOG00000001464	-	78	74.699	Gadus_morhua
MGP_SPRETEiJ_G0019491	-	98	62.670	ENSGALG00000012607	ZCCHC6	96	61.544	Gallus_gallus
MGP_SPRETEiJ_G0019491	-	60	63.918	ENSGAFG00000017141	-	79	63.918	Gambusia_affinis
MGP_SPRETEiJ_G0019491	-	70	64.794	ENSGACG00000004735	TUT7	84	75.422	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0019491	-	99	61.753	ENSGAGG00000013087	TUT7	99	61.620	Gopherus_agassizii
MGP_SPRETEiJ_G0019491	-	91	92.481	ENSGGOG00000007523	ZCCHC6	98	92.346	Gorilla_gorilla
MGP_SPRETEiJ_G0019491	-	99	77.981	ENSHGLG00000018427	TUT7	99	77.710	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0019491	-	99	77.913	ENSHGLG00100004701	TUT7	99	77.642	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0019491	-	100	82.150	ENSSTOG00000000586	TUT7	100	82.082	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0019491	-	93	73.817	ENSJJAG00000000106	-	94	83.375	Jaculus_jaculus
MGP_SPRETEiJ_G0019491	-	59	66.029	ENSLBEG00000015545	-	66	64.516	Labrus_bergylta
MGP_SPRETEiJ_G0019491	-	99	52.844	ENSLOCG00000002472	TUT7	99	52.268	Lepisosteus_oculatus
MGP_SPRETEiJ_G0019491	-	93	71.550	ENSLAFG00000007884	TUT7	100	73.511	Loxodonta_africana
MGP_SPRETEiJ_G0019491	-	91	92.481	ENSMFAG00000000971	TUT7	98	92.346	Macaca_fascicularis
MGP_SPRETEiJ_G0019491	-	91	92.481	ENSMMUG00000003401	TUT7	98	92.346	Macaca_mulatta
MGP_SPRETEiJ_G0019491	-	91	92.481	ENSMNEG00000031427	TUT7	98	92.346	Macaca_nemestrina
MGP_SPRETEiJ_G0019491	-	91	92.481	ENSMLEG00000027049	TUT7	98	92.346	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0019491	-	62	69.703	ENSMAMG00000011815	TUT7	95	54.364	Mastacembelus_armatus
MGP_SPRETEiJ_G0019491	-	67	70.270	ENSMZEG00005012809	TUT7	72	70.270	Maylandia_zebra
MGP_SPRETEiJ_G0019491	-	99	57.420	ENSMGAG00000006542	TUT7	98	57.814	Meleagris_gallopavo
MGP_SPRETEiJ_G0019491	-	99	83.254	ENSMAUG00000006963	-	99	83.254	Mesocricetus_auratus
MGP_SPRETEiJ_G0019491	-	90	93.086	ENSMICG00000016944	TUT7	98	93.086	Microcebus_murinus
MGP_SPRETEiJ_G0019491	-	86	80.368	ENSMOCG00000007812	-	97	84.707	Microtus_ochrogaster
MGP_SPRETEiJ_G0019491	-	99	65.439	ENSMODG00000003542	TUT7	97	65.863	Monodelphis_domestica
MGP_SPRETEiJ_G0019491	-	68	59.725	ENSMALG00000000634	TUT7	90	54.198	Monopterus_albus
MGP_SPRETEiJ_G0019491	-	99	97.969	MGP_CAROLIEiJ_G0018612	-	96	97.969	Mus_caroli
MGP_SPRETEiJ_G0019491	-	100	99.389	ENSMUSG00000035248	Tut7	100	99.389	Mus_musculus
MGP_SPRETEiJ_G0019491	-	100	94.669	MGP_PahariEiJ_G0019676	-	100	94.602	Mus_pahari
MGP_SPRETEiJ_G0019491	-	99	79.743	ENSMPUG00000002191	TUT7	96	79.743	Mustela_putorius_furo
MGP_SPRETEiJ_G0019491	-	99	77.733	ENSMLUG00000001298	TUT7	99	77.665	Myotis_lucifugus
MGP_SPRETEiJ_G0019491	-	87	77.071	ENSNGAG00000022758	-	97	80.909	Nannospalax_galili
MGP_SPRETEiJ_G0019491	-	62	70.270	ENSNBRG00000021961	TUT7	73	70.270	Neolamprologus_brichardi
MGP_SPRETEiJ_G0019491	-	91	92.481	ENSNLEG00000005138	TUT7	98	92.346	Nomascus_leucogenys
MGP_SPRETEiJ_G0019491	-	79	76.042	ENSMEUG00000006540	TUT7	78	72.848	Notamacropus_eugenii
MGP_SPRETEiJ_G0019491	-	99	75.462	ENSOPRG00000002893	TUT7	92	75.462	Ochotona_princeps
MGP_SPRETEiJ_G0019491	-	83	75.263	ENSODEG00000006904	-	92	83.375	Octodon_degus
MGP_SPRETEiJ_G0019491	-	73	63.119	ENSONIG00000017001	TUT7	86	65.830	Oreochromis_niloticus
MGP_SPRETEiJ_G0019491	-	99	78.686	ENSOCUG00000010949	TUT7	94	78.619	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0019491	-	65	46.719	ENSORLG00000001714	-	97	44.615	Oryzias_latipes
MGP_SPRETEiJ_G0019491	-	58	56.030	ENSORLG00020007882	-	69	56.030	Oryzias_latipes_hni
MGP_SPRETEiJ_G0019491	-	54	50.657	ENSORLG00015017233	-	68	50.562	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0019491	-	67	61.914	ENSOMEG00000015528	-	83	51.768	Oryzias_melastigma
MGP_SPRETEiJ_G0019491	-	99	81.554	ENSOGAG00000015630	TUT7	99	81.419	Otolemur_garnettii
MGP_SPRETEiJ_G0019491	-	99	80.014	ENSOARG00000008732	TUT7	96	79.743	Ovis_aries
MGP_SPRETEiJ_G0019491	-	91	92.481	ENSPPAG00000038548	TUT7	98	92.346	Pan_paniscus
MGP_SPRETEiJ_G0019491	-	92	92.593	ENSPPRG00000011084	TUT7	98	92.593	Panthera_pardus
MGP_SPRETEiJ_G0019491	-	92	92.593	ENSPTIG00000007881	TUT7	98	92.593	Panthera_tigris_altaica
MGP_SPRETEiJ_G0019491	-	91	92.481	ENSPTRG00000021076	TUT7	98	92.346	Pan_troglodytes
MGP_SPRETEiJ_G0019491	-	99	78.571	ENSPANG00000024890	TUT7	95	83.777	Papio_anubis
MGP_SPRETEiJ_G0019491	-	80	68.750	ENSPKIG00000022326	TUT7	77	67.864	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0019491	-	99	64.111	ENSPSIG00000003600	TUT7	96	63.847	Pelodiscus_sinensis
MGP_SPRETEiJ_G0019491	-	99	88.511	ENSPEMG00000014030	-	99	88.579	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0019491	-	99	65.803	ENSPCIG00000018302	TUT7	99	66.223	Phascolarctos_cinereus
MGP_SPRETEiJ_G0019491	-	67	72.893	ENSPFOG00000011606	-	82	72.523	Poecilia_formosa
MGP_SPRETEiJ_G0019491	-	67	64.516	ENSPLAG00000006121	TUT7	96	55.670	Poecilia_latipinna
MGP_SPRETEiJ_G0019491	-	67	63.653	ENSPREG00000009118	TUT7	79	64.444	Poecilia_reticulata
MGP_SPRETEiJ_G0019491	-	100	80.417	ENSPPYG00000019340	TUT7	100	80.350	Pongo_abelii
MGP_SPRETEiJ_G0019491	-	70	86.928	ENSPCAG00000011630	TUT7	65	86.882	Procavia_capensis
MGP_SPRETEiJ_G0019491	-	91	92.840	ENSPCOG00000023407	TUT7	98	92.840	Propithecus_coquereli
MGP_SPRETEiJ_G0019491	-	99	77.885	ENSPVAG00000004589	TUT7	99	73.591	Pteropus_vampyrus
MGP_SPRETEiJ_G0019491	-	66	70.270	ENSPNYG00000004149	TUT7	72	70.270	Pundamilia_nyererei
MGP_SPRETEiJ_G0019491	-	100	91.852	ENSRNOG00000016629	Tut7	100	91.582	Rattus_norvegicus
MGP_SPRETEiJ_G0019491	-	91	92.481	ENSRBIG00000016827	TUT7	98	92.346	Rhinopithecus_bieti
MGP_SPRETEiJ_G0019491	-	91	92.481	ENSRROG00000034432	TUT7	98	92.346	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0019491	-	99	66.020	ENSSHAG00000008290	TUT7	97	66.443	Sarcophilus_harrisii
MGP_SPRETEiJ_G0019491	-	99	48.798	ENSSFOG00015009813	zcchc6	77	68.550	Scleropages_formosus
MGP_SPRETEiJ_G0019491	-	66	77.143	ENSSDUG00000012876	TUT7	73	77.143	Seriola_dumerili
MGP_SPRETEiJ_G0019491	-	91	72.429	ENSSARG00000009763	TUT7	91	72.218	Sorex_araneus
MGP_SPRETEiJ_G0019491	-	99	63.769	ENSSPUG00000004029	TUT7	99	64.125	Sphenodon_punctatus
MGP_SPRETEiJ_G0019491	-	68	53.271	ENSSPAG00000018387	-	94	53.110	Stegastes_partitus
MGP_SPRETEiJ_G0019491	-	100	80.404	ENSSSCG00000010952	TUT7	100	80.606	Sus_scrofa
MGP_SPRETEiJ_G0019491	-	99	61.672	ENSTGUG00000000624	TUT7	99	61.323	Taeniopygia_guttata
MGP_SPRETEiJ_G0019491	-	71	62.313	ENSTNIG00000015951	TUT7	91	64.188	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0019491	-	99	72.512	ENSTBEG00000010446	TUT7	98	72.647	Tupaia_belangeri
MGP_SPRETEiJ_G0019491	-	93	81.943	ENSTTRG00000004236	TUT7	93	81.682	Tursiops_truncatus
MGP_SPRETEiJ_G0019491	-	70	86.552	ENSUAMG00000027094	-	91	93.617	Ursus_americanus
MGP_SPRETEiJ_G0019491	-	99	80.229	ENSUMAG00000004929	TUT7	98	80.229	Ursus_maritimus
MGP_SPRETEiJ_G0019491	-	96	86.745	ENSVPAG00000001946	TUT7	93	86.745	Vicugna_pacos
MGP_SPRETEiJ_G0019491	-	100	80.647	ENSVVUG00000022427	TUT7	100	80.647	Vulpes_vulpes
MGP_SPRETEiJ_G0019491	-	99	54.235	ENSXETG00000017552	tut7	99	53.696	Xenopus_tropicalis
MGP_SPRETEiJ_G0019491	-	78	64.165	ENSXCOG00000009445	-	86	63.602	Xiphophorus_couchianus