EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0019772 (Gene tree)
Gene ID: -
Gene Symbol: Ddx4
Alias: Mvh|VASA|mvh / m'vasa
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 53736 bases
Position: chr13:109686218-109739953
Accession: 102670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0037171	DEAD	PF00270.29	4.6e-49	1	1
MGP_SPRETEiJ_P0037172	DEAD	PF00270.29	5e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0037172	-	2848	-	MGP_SPRETEiJ_P0037172	728 (aa)	-	-
MGP_SPRETEiJ_T0037171	-	2770	-	MGP_SPRETEiJ_P0037171	702 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0019772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0019772's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0019772	Ddx4	53	30.457	MGP_SPRETEiJ_G0033080	Ddx25	80	30.488
MGP_SPRETEiJ_G0019772	Ddx4	56	34.527	MGP_SPRETEiJ_G0030034	Ddx47	93	34.015
MGP_SPRETEiJ_G0019772	Ddx4	57	38.519	MGP_SPRETEiJ_G0019448	Ddx41	64	38.519
MGP_SPRETEiJ_G0019772	Ddx4	62	52.370	MGP_SPRETEiJ_G0015828	D1Pas1	71	49.367
MGP_SPRETEiJ_G0019772	Ddx4	57	38.765	MGP_SPRETEiJ_G0018173	Ddx5	64	38.765
MGP_SPRETEiJ_G0019772	Ddx4	52	34.474	MGP_SPRETEiJ_G0032257	Ddx49	74	34.840
MGP_SPRETEiJ_G0019772	Ddx4	53	38.947	MGP_SPRETEiJ_G0015463	Ddx59	59	38.947
MGP_SPRETEiJ_G0019772	Ddx4	56	40.000	MGP_SPRETEiJ_G0033607	Ddx43	60	40.000
MGP_SPRETEiJ_G0019772	Ddx4	57	34.314	MGP_SPRETEiJ_G0017733	Ddx52	66	34.314
MGP_SPRETEiJ_G0019772	Ddx4	57	38.916	MGP_SPRETEiJ_G0020915	Ddx17	61	38.916
MGP_SPRETEiJ_G0019772	Ddx4	56	30.691	MGP_SPRETEiJ_G0018339	Eif4a3	90	30.691

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0019772	Ddx4	100	88.782	ENSG00000152670	DDX4	100	88.782	Homo_sapiens
MGP_SPRETEiJ_G0019772	Ddx4	57	61.347	ENSAPOG00000021394	ddx4	100	61.097	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0019772	Ddx4	100	92.066	ENSAMEG00000013960	DDX4	100	92.339	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0019772	Ddx4	57	67.082	ENSACIG00000017623	ddx4	100	67.082	Amphilophus_citrinellus
MGP_SPRETEiJ_G0019772	Ddx4	57	66.584	ENSAPEG00000008490	ddx4	100	66.584	Amphiprion_percula
MGP_SPRETEiJ_G0019772	Ddx4	57	69.327	ENSATEG00000011704	ddx4	100	69.327	Anabas_testudineus
MGP_SPRETEiJ_G0019772	Ddx4	62	81.279	ENSAPLG00000011662	DDX4	98	81.279	Anas_platyrhynchos
MGP_SPRETEiJ_G0019772	Ddx4	100	63.966	ENSACAG00000014951	DDX4	100	63.333	Anolis_carolinensis
MGP_SPRETEiJ_G0019772	Ddx4	100	87.278	ENSANAG00000029060	DDX4	100	87.551	Aotus_nancymaae
MGP_SPRETEiJ_G0019772	Ddx4	70	66.667	ENSACLG00000007422	ddx4	86	62.662	Astatotilapia_calliptera
MGP_SPRETEiJ_G0019772	Ddx4	73	67.892	ENSAMXG00000010288	ddx4	85	64.716	Astyanax_mexicanus
MGP_SPRETEiJ_G0019772	Ddx4	100	90.213	ENSBTAG00000008871	DDX4	100	90.638	Bos_taurus
MGP_SPRETEiJ_G0019772	Ddx4	64	43.441	WBGene00001598	glh-1	61	43.284	Caenorhabditis_elegans
MGP_SPRETEiJ_G0019772	Ddx4	66	40.625	WBGene00001600	glh-3	67	40.625	Caenorhabditis_elegans
MGP_SPRETEiJ_G0019772	Ddx4	100	86.731	ENSCJAG00000001951	DDX4	100	87.004	Callithrix_jacchus
MGP_SPRETEiJ_G0019772	Ddx4	100	91.108	ENSCAFG00000006875	DDX4	100	91.518	Canis_familiaris
MGP_SPRETEiJ_G0019772	Ddx4	100	87.909	ENSCAFG00020024295	DDX4	100	87.909	Canis_lupus_dingo
MGP_SPRETEiJ_G0019772	Ddx4	100	90.561	ENSCHIG00000015567	DDX4	100	90.698	Capra_hircus
MGP_SPRETEiJ_G0019772	Ddx4	100	86.557	ENSTSYG00000011848	DDX4	100	86.557	Carlito_syrichta
MGP_SPRETEiJ_G0019772	Ddx4	100	70.919	ENSCPOG00000004327	DDX4	100	70.645	Cavia_porcellus
MGP_SPRETEiJ_G0019772	Ddx4	100	87.688	ENSCCAG00000028725	DDX4	100	88.098	Cebus_capucinus
MGP_SPRETEiJ_G0019772	Ddx4	100	89.330	ENSCATG00000044303	DDX4	100	89.330	Cercocebus_atys
MGP_SPRETEiJ_G0019772	Ddx4	100	89.205	ENSCLAG00000005386	DDX4	100	89.347	Chinchilla_lanigera
MGP_SPRETEiJ_G0019772	Ddx4	100	88.618	ENSCSAG00000016336	DDX4	100	88.618	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0019772	Ddx4	100	78.493	ENSCHOG00000000200	DDX4	100	78.767	Choloepus_hoffmanni
MGP_SPRETEiJ_G0019772	Ddx4	91	79.492	ENSCPBG00000026547	DDX4	93	79.492	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0019772	Ddx4	61	61.682	ENSCING00000001412	-	85	57.113	Ciona_intestinalis
MGP_SPRETEiJ_G0019772	Ddx4	64	61.384	ENSCSAVG00000004304	-	73	61.123	Ciona_savignyi
MGP_SPRETEiJ_G0019772	Ddx4	100	80.575	ENSCANG00000003129	DDX4	100	80.575	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0019772	Ddx4	100	96.866	ENSCGRG00001014961	Ddx4	100	96.866	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0019772	Ddx4	100	96.866	ENSCGRG00000001251	Ddx4	100	96.866	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0019772	Ddx4	62	66.133	ENSCSEG00000006039	ddx4	81	57.092	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0019772	Ddx4	67	72.591	ENSDARG00000014373	ddx4	96	57.542	Danio_rerio
MGP_SPRETEiJ_G0019772	Ddx4	95	86.795	ENSDNOG00000011658	DDX4	100	87.644	Dasypus_novemcinctus
MGP_SPRETEiJ_G0019772	Ddx4	100	89.250	ENSDORG00000012201	Ddx4	100	91.231	Dipodomys_ordii
MGP_SPRETEiJ_G0019772	Ddx4	61	55.035	FBgn0283442	vas	71	50.507	Drosophila_melanogaster
MGP_SPRETEiJ_G0019772	Ddx4	69	90.828	ENSETEG00000001835	DDX4	71	90.828	Echinops_telfairi
MGP_SPRETEiJ_G0019772	Ddx4	61	52.489	ENSEBUG00000003290	-	85	52.489	Eptatretus_burgeri
MGP_SPRETEiJ_G0019772	Ddx4	100	90.922	ENSEASG00005012143	DDX4	100	93.858	Equus_asinus_asinus
MGP_SPRETEiJ_G0019772	Ddx4	100	90.922	ENSECAG00000023616	DDX4	100	90.922	Equus_caballus
MGP_SPRETEiJ_G0019772	Ddx4	79	95.491	ENSEEUG00000012462	DDX4	81	95.491	Erinaceus_europaeus
MGP_SPRETEiJ_G0019772	Ddx4	70	68.635	ENSELUG00000017328	ddx4	85	63.316	Esox_lucius
MGP_SPRETEiJ_G0019772	Ddx4	100	90.834	ENSFCAG00000012560	DDX4	100	91.108	Felis_catus
MGP_SPRETEiJ_G0019772	Ddx4	71	72.490	ENSFALG00000010910	DDX4	70	68.773	Ficedula_albicollis
MGP_SPRETEiJ_G0019772	Ddx4	100	89.489	ENSFDAG00000003703	DDX4	100	89.489	Fukomys_damarensis
MGP_SPRETEiJ_G0019772	Ddx4	71	65.594	ENSFHEG00000019935	ddx4	88	60.563	Fundulus_heteroclitus
MGP_SPRETEiJ_G0019772	Ddx4	80	63.717	ENSGALG00000014713	DDX4	79	65.018	Gallus_gallus
MGP_SPRETEiJ_G0019772	Ddx4	66	68.172	ENSGAFG00000016509	ddx4	99	54.096	Gambusia_affinis
MGP_SPRETEiJ_G0019772	Ddx4	66	70.499	ENSGACG00000015323	ddx4	95	70.499	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0019772	Ddx4	100	88.646	ENSGGOG00000002439	DDX4	100	88.646	Gorilla_gorilla
MGP_SPRETEiJ_G0019772	Ddx4	70	66.667	ENSHBUG00000001897	ddx4	82	66.667	Haplochromis_burtoni
MGP_SPRETEiJ_G0019772	Ddx4	100	81.818	ENSHGLG00000003594	DDX4	100	82.102	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0019772	Ddx4	62	73.227	ENSHGLG00100001008	-	90	73.227	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0019772	Ddx4	74	64.381	ENSHCOG00000018337	ddx4	86	64.381	Hippocampus_comes
MGP_SPRETEiJ_G0019772	Ddx4	73	67.379	ENSIPUG00000001845	ddx4	87	65.926	Ictalurus_punctatus
MGP_SPRETEiJ_G0019772	Ddx4	100	93.626	ENSSTOG00000021044	DDX4	100	93.909	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0019772	Ddx4	100	90.625	ENSJJAG00000015867	Ddx4	100	90.909	Jaculus_jaculus
MGP_SPRETEiJ_G0019772	Ddx4	70	67.418	ENSLBEG00000019504	ddx4	79	65.010	Labrus_bergylta
MGP_SPRETEiJ_G0019772	Ddx4	70	71.516	ENSLOCG00000010887	ddx4	100	71.516	Lepisosteus_oculatus
MGP_SPRETEiJ_G0019772	Ddx4	100	89.377	ENSLAFG00000005900	DDX4	100	89.802	Loxodonta_africana
MGP_SPRETEiJ_G0019772	Ddx4	100	89.193	ENSMFAG00000040186	DDX4	100	89.193	Macaca_fascicularis
MGP_SPRETEiJ_G0019772	Ddx4	100	89.193	ENSMMUG00000017386	DDX4	100	89.193	Macaca_mulatta
MGP_SPRETEiJ_G0019772	Ddx4	100	89.193	ENSMNEG00000033343	DDX4	98	91.973	Macaca_nemestrina
MGP_SPRETEiJ_G0019772	Ddx4	96	83.357	ENSMLEG00000038233	DDX4	100	83.357	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0019772	Ddx4	57	66.833	ENSMAMG00000003574	ddx4	100	66.833	Mastacembelus_armatus
MGP_SPRETEiJ_G0019772	Ddx4	70	66.667	ENSMZEG00005019116	ddx4	84	66.667	Maylandia_zebra
MGP_SPRETEiJ_G0019772	Ddx4	100	85.185	ENSMAUG00000019873	Ddx4	100	85.185	Mesocricetus_auratus
MGP_SPRETEiJ_G0019772	Ddx4	100	91.108	ENSMICG00000008994	-	100	91.518	Microcebus_murinus
MGP_SPRETEiJ_G0019772	Ddx4	90	76.108	ENSMICG00000028132	-	95	76.704	Microcebus_murinus
MGP_SPRETEiJ_G0019772	Ddx4	100	97.009	ENSMOCG00000013250	Ddx4	100	97.009	Microtus_ochrogaster
MGP_SPRETEiJ_G0019772	Ddx4	74	61.495	ENSMMOG00000004689	ddx4	94	61.495	Mola_mola
MGP_SPRETEiJ_G0019772	Ddx4	100	83.973	ENSMODG00000019511	DDX4	100	83.973	Monodelphis_domestica
MGP_SPRETEiJ_G0019772	Ddx4	100	98.291	MGP_CAROLIEiJ_G0018893	Ddx4	100	98.291	Mus_caroli
MGP_SPRETEiJ_G0019772	Ddx4	100	99.573	ENSMUSG00000021758	Ddx4	100	99.573	Mus_musculus
MGP_SPRETEiJ_G0019772	Ddx4	100	98.291	MGP_PahariEiJ_G0015964	Ddx4	100	98.291	Mus_pahari
MGP_SPRETEiJ_G0019772	Ddx4	100	92.476	ENSMPUG00000007596	DDX4	100	92.750	Mustela_putorius_furo
MGP_SPRETEiJ_G0019772	Ddx4	100	83.832	ENSMLUG00000001189	DDX4	100	83.832	Myotis_lucifugus
MGP_SPRETEiJ_G0019772	Ddx4	100	91.792	ENSNGAG00000013259	Ddx4	100	92.202	Nannospalax_galili
MGP_SPRETEiJ_G0019772	Ddx4	70	64.024	ENSNBRG00000014442	ddx4	100	58.128	Neolamprologus_brichardi
MGP_SPRETEiJ_G0019772	Ddx4	100	86.183	ENSNLEG00000001662	DDX4	100	86.047	Nomascus_leucogenys
MGP_SPRETEiJ_G0019772	Ddx4	69	83.000	ENSMEUG00000007757	DDX4	70	83.000	Notamacropus_eugenii
MGP_SPRETEiJ_G0019772	Ddx4	75	66.849	ENSOPRG00000008071	DDX4	100	67.031	Ochotona_princeps
MGP_SPRETEiJ_G0019772	Ddx4	100	82.906	ENSODEG00000003839	-	100	82.621	Octodon_degus
MGP_SPRETEiJ_G0019772	Ddx4	100	87.123	ENSODEG00000016951	-	100	87.260	Octodon_degus
MGP_SPRETEiJ_G0019772	Ddx4	68	66.667	ENSONIG00000012063	ddx4	98	66.596	Oreochromis_niloticus
MGP_SPRETEiJ_G0019772	Ddx4	53	85.829	ENSOANG00000004888	-	94	85.829	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0019772	Ddx4	100	88.098	ENSOCUG00000008597	DDX4	100	88.235	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0019772	Ddx4	70	68.293	ENSORLG00000020672	ddx4	90	62.522	Oryzias_latipes
MGP_SPRETEiJ_G0019772	Ddx4	67	70.426	ENSORLG00020014206	ddx4	90	62.937	Oryzias_latipes_hni
MGP_SPRETEiJ_G0019772	Ddx4	67	70.426	ENSORLG00015016600	ddx4	90	62.872	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0019772	Ddx4	73	64.797	ENSOMEG00000010651	ddx4	91	61.632	Oryzias_melastigma
MGP_SPRETEiJ_G0019772	Ddx4	100	90.587	ENSOGAG00000007588	DDX4	100	90.996	Otolemur_garnettii
MGP_SPRETEiJ_G0019772	Ddx4	100	90.191	ENSOARG00000007644	DDX4	100	90.327	Ovis_aries
MGP_SPRETEiJ_G0019772	Ddx4	100	88.782	ENSPPAG00000033915	DDX4	100	88.782	Pan_paniscus
MGP_SPRETEiJ_G0019772	Ddx4	100	89.782	ENSPPRG00000011417	DDX4	100	90.599	Panthera_pardus
MGP_SPRETEiJ_G0019772	Ddx4	100	90.424	ENSPTIG00000007748	DDX4	100	90.698	Panthera_tigris_altaica
MGP_SPRETEiJ_G0019772	Ddx4	100	88.782	ENSPTRG00000016884	DDX4	100	88.782	Pan_troglodytes
MGP_SPRETEiJ_G0019772	Ddx4	100	89.056	ENSPANG00000010945	DDX4	100	89.056	Papio_anubis
MGP_SPRETEiJ_G0019772	Ddx4	89	74.679	ENSPSIG00000017179	DDX4	97	76.190	Pelodiscus_sinensis
MGP_SPRETEiJ_G0019772	Ddx4	53	62.299	ENSPMGG00000015642	ddx4	93	62.299	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0019772	Ddx4	100	96.439	ENSPEMG00000010086	Ddx4	100	96.439	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0019772	Ddx4	93	84.475	ENSPCIG00000024758	DDX4	100	84.148	Phascolarctos_cinereus
MGP_SPRETEiJ_G0019772	Ddx4	66	68.534	ENSPFOG00000018842	ddx4	99	53.912	Poecilia_formosa
MGP_SPRETEiJ_G0019772	Ddx4	66	68.750	ENSPLAG00000020726	ddx4	99	54.054	Poecilia_latipinna
MGP_SPRETEiJ_G0019772	Ddx4	66	68.534	ENSPMEG00000002976	ddx4	99	53.912	Poecilia_mexicana
MGP_SPRETEiJ_G0019772	Ddx4	66	68.602	ENSPREG00000017840	ddx4	84	63.790	Poecilia_reticulata
MGP_SPRETEiJ_G0019772	Ddx4	100	89.193	ENSPPYG00000015472	DDX4	100	89.193	Pongo_abelii
MGP_SPRETEiJ_G0019772	Ddx4	100	77.260	ENSPCAG00000002675	DDX4	100	77.260	Procavia_capensis
MGP_SPRETEiJ_G0019772	Ddx4	97	90.368	ENSPVAG00000002448	DDX4	100	90.793	Pteropus_vampyrus
MGP_SPRETEiJ_G0019772	Ddx4	70	66.462	ENSPNYG00000022212	ddx4	84	66.462	Pundamilia_nyererei
MGP_SPRETEiJ_G0019772	Ddx4	62	72.917	ENSPNAG00000003686	ddx4	78	67.606	Pygocentrus_nattereri
MGP_SPRETEiJ_G0019772	Ddx4	96	96.724	ENSRNOG00000026686	Ddx4	99	96.724	Rattus_norvegicus
MGP_SPRETEiJ_G0019772	Ddx4	100	88.782	ENSRBIG00000028795	DDX4	100	88.782	Rhinopithecus_bieti
MGP_SPRETEiJ_G0019772	Ddx4	100	88.646	ENSRROG00000045392	DDX4	100	88.646	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0019772	Ddx4	71	45.419	YPL119C	DBP1	85	45.028	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0019772	Ddx4	100	87.551	ENSSBOG00000035231	DDX4	100	87.825	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0019772	Ddx4	100	83.743	ENSSHAG00000009132	DDX4	100	83.743	Sarcophilus_harrisii
MGP_SPRETEiJ_G0019772	Ddx4	70	70.757	ENSSFOG00015006531	ddx4	86	65.241	Scleropages_formosus
MGP_SPRETEiJ_G0019772	Ddx4	67	67.880	ENSSMAG00000009800	ddx4	87	61.023	Scophthalmus_maximus
MGP_SPRETEiJ_G0019772	Ddx4	70	68.238	ENSSDUG00000022015	ddx4	82	65.341	Seriola_dumerili
MGP_SPRETEiJ_G0019772	Ddx4	57	68.408	ENSSLDG00000015312	ddx4	100	68.408	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0019772	Ddx4	100	78.082	ENSSARG00000004206	DDX4	100	79.178	Sorex_araneus
MGP_SPRETEiJ_G0019772	Ddx4	66	85.900	ENSSPUG00000007260	DDX4	79	85.900	Sphenodon_punctatus
MGP_SPRETEiJ_G0019772	Ddx4	57	65.087	ENSSPAG00000014307	ddx4	100	65.087	Stegastes_partitus
MGP_SPRETEiJ_G0019772	Ddx4	100	91.245	ENSSSCG00000016913	DDX4	100	91.518	Sus_scrofa
MGP_SPRETEiJ_G0019772	Ddx4	62	76.712	ENSTGUG00000002548	DDX4	100	76.712	Taeniopygia_guttata
MGP_SPRETEiJ_G0019772	Ddx4	73	57.946	ENSTNIG00000014474	ddx4	93	57.836	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0019772	Ddx4	87	73.898	ENSTBEG00000003569	DDX4	87	73.898	Tupaia_belangeri
MGP_SPRETEiJ_G0019772	Ddx4	100	85.089	ENSTTRG00000009316	DDX4	100	84.542	Tursiops_truncatus
MGP_SPRETEiJ_G0019772	Ddx4	100	87.624	ENSUAMG00000023028	DDX4	100	87.624	Ursus_americanus
MGP_SPRETEiJ_G0019772	Ddx4	100	87.624	ENSUMAG00000009291	DDX4	100	87.624	Ursus_maritimus
MGP_SPRETEiJ_G0019772	Ddx4	99	88.520	ENSVPAG00000009491	DDX4	99	89.627	Vicugna_pacos
MGP_SPRETEiJ_G0019772	Ddx4	100	92.057	ENSVVUG00000021369	DDX4	100	92.482	Vulpes_vulpes
MGP_SPRETEiJ_G0019772	Ddx4	92	55.700	ENSXETG00000030832	DDX4	94	57.293	Xenopus_tropicalis
MGP_SPRETEiJ_G0019772	Ddx4	66	69.032	ENSXMAG00000009677	ddx4	99	56.581	Xiphophorus_maculatus