EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0019775 (Gene tree)
Gene ID: -
Gene Symbol: Mtrex
Alias: 2610528A15Rik|Skiv2l2
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 59432 bases
Position: chr13:109969557-110028988
Accession: 1919448
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0037176	rRNA_proc-arch	PF13234.6	6.8e-87	1	1
MGP_SPRETEiJ_P0037176	DEAD	PF00270.29	8.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0037176	-	3307	-	MGP_SPRETEiJ_P0037176	1040 (aa)	-	UPI0000021CEB

Gene Model

Click here to download MGP_SPRETEiJ_G0019775's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0019775's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0019775	Mtrex	88	37.591	MGP_SPRETEiJ_G0022382	Skiv2l	76	37.695

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0019775	Mtrex	100	97.505	ENSG00000039123	MTREX	100	97.505	Homo_sapiens
MGP_SPRETEiJ_G0019775	Mtrex	100	82.792	ENSAPOG00000007814	mtrex	100	82.792	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0019775	Mtrex	100	97.124	ENSAMEG00000013856	MTREX	100	97.124	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0019775	Mtrex	92	87.565	ENSACIG00000015117	mtrex	96	87.565	Amphilophus_citrinellus
MGP_SPRETEiJ_G0019775	Mtrex	100	82.904	ENSAOCG00000011884	mtrex	100	82.792	Amphiprion_ocellaris
MGP_SPRETEiJ_G0019775	Mtrex	100	82.808	ENSAPEG00000019384	mtrex	100	82.696	Amphiprion_percula
MGP_SPRETEiJ_G0019775	Mtrex	100	83.668	ENSATEG00000015117	mtrex	100	83.668	Anabas_testudineus
MGP_SPRETEiJ_G0019775	Mtrex	95	92.850	ENSAPLG00000009694	MTREX	100	92.850	Anas_platyrhynchos
MGP_SPRETEiJ_G0019775	Mtrex	100	90.996	ENSACAG00000015200	MTREX	96	91.250	Anolis_carolinensis
MGP_SPRETEiJ_G0019775	Mtrex	100	97.409	ENSANAG00000023095	MTREX	100	97.409	Aotus_nancymaae
MGP_SPRETEiJ_G0019775	Mtrex	100	82.330	ENSACLG00000001921	mtrex	100	82.218	Astatotilapia_calliptera
MGP_SPRETEiJ_G0019775	Mtrex	97	81.299	ENSAMXG00000018751	mtrex	99	83.501	Astyanax_mexicanus
MGP_SPRETEiJ_G0019775	Mtrex	100	97.308	ENSBTAG00000010518	MTREX	100	97.308	Bos_taurus
MGP_SPRETEiJ_G0019775	Mtrex	91	53.417	WBGene00012342	mtr-4	95	52.648	Caenorhabditis_elegans
MGP_SPRETEiJ_G0019775	Mtrex	100	96.279	ENSCJAG00000001773	MTREX	100	96.279	Callithrix_jacchus
MGP_SPRETEiJ_G0019775	Mtrex	100	97.121	ENSCAFG00000006818	MTREX	100	97.121	Canis_familiaris
MGP_SPRETEiJ_G0019775	Mtrex	100	97.121	ENSCAFG00020024352	MTREX	100	97.121	Canis_lupus_dingo
MGP_SPRETEiJ_G0019775	Mtrex	100	97.121	ENSCHIG00000024413	MTREX	100	97.121	Capra_hircus
MGP_SPRETEiJ_G0019775	Mtrex	93	97.127	ENSTSYG00000007389	MTREX	100	97.127	Carlito_syrichta
MGP_SPRETEiJ_G0019775	Mtrex	96	72.545	ENSCAPG00000008696	MTREX	100	72.545	Cavia_aperea
MGP_SPRETEiJ_G0019775	Mtrex	100	96.833	ENSCPOG00000009797	MTREX	100	96.833	Cavia_porcellus
MGP_SPRETEiJ_G0019775	Mtrex	100	97.313	ENSCCAG00000014177	MTREX	100	97.313	Cebus_capucinus
MGP_SPRETEiJ_G0019775	Mtrex	100	97.409	ENSCATG00000042153	MTREX	100	97.409	Cercocebus_atys
MGP_SPRETEiJ_G0019775	Mtrex	100	96.545	ENSCLAG00000006622	MTREX	100	96.545	Chinchilla_lanigera
MGP_SPRETEiJ_G0019775	Mtrex	100	92.823	ENSCSAG00000016445	MTREX	100	92.919	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0019775	Mtrex	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
MGP_SPRETEiJ_G0019775	Mtrex	100	92.219	ENSCPBG00000026551	MTREX	94	92.699	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0019775	Mtrex	99	66.252	ENSCING00000003239	-	99	66.092	Ciona_intestinalis
MGP_SPRETEiJ_G0019775	Mtrex	99	65.138	ENSCSAVG00000009304	-	100	69.570	Ciona_savignyi
MGP_SPRETEiJ_G0019775	Mtrex	100	97.313	ENSCANG00000035770	MTREX	100	97.313	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0019775	Mtrex	100	98.367	ENSCGRG00001024680	Mtrex	100	98.367	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0019775	Mtrex	100	98.367	ENSCGRG00000000307	Mtrex	100	98.367	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0019775	Mtrex	100	81.757	ENSCSEG00000018621	mtrex	98	81.757	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0019775	Mtrex	100	83.923	ENSCVAG00000004556	mtrex	100	83.923	Cyprinodon_variegatus
MGP_SPRETEiJ_G0019775	Mtrex	100	84.689	ENSDARG00000013457	mtrex	100	84.402	Danio_rerio
MGP_SPRETEiJ_G0019775	Mtrex	100	95.793	ENSDNOG00000015375	MTREX	100	95.793	Dasypus_novemcinctus
MGP_SPRETEiJ_G0019775	Mtrex	100	96.929	ENSDORG00000006782	Mtrex	100	96.929	Dipodomys_ordii
MGP_SPRETEiJ_G0019775	Mtrex	99	62.405	FBgn0001986	Mtr4	92	65.886	Drosophila_melanogaster
MGP_SPRETEiJ_G0019775	Mtrex	90	80.414	ENSETEG00000000727	MTREX	90	80.414	Echinops_telfairi
MGP_SPRETEiJ_G0019775	Mtrex	99	74.446	ENSEBUG00000012869	mtrex	99	74.138	Eptatretus_burgeri
MGP_SPRETEiJ_G0019775	Mtrex	100	96.737	ENSEASG00005013270	MTREX	100	96.737	Equus_asinus_asinus
MGP_SPRETEiJ_G0019775	Mtrex	100	96.833	ENSECAG00000023723	MTREX	100	99.074	Equus_caballus
MGP_SPRETEiJ_G0019775	Mtrex	98	87.805	ENSEEUG00000000527	MTREX	100	87.805	Erinaceus_europaeus
MGP_SPRETEiJ_G0019775	Mtrex	98	84.302	ENSELUG00000004898	mtrex	100	89.286	Esox_lucius
MGP_SPRETEiJ_G0019775	Mtrex	100	97.121	ENSFCAG00000010575	MTREX	100	97.121	Felis_catus
MGP_SPRETEiJ_G0019775	Mtrex	100	90.288	ENSFALG00000010850	MTREX	100	90.288	Ficedula_albicollis
MGP_SPRETEiJ_G0019775	Mtrex	100	96.538	ENSFDAG00000011199	MTREX	100	96.538	Fukomys_damarensis
MGP_SPRETEiJ_G0019775	Mtrex	100	83.127	ENSFHEG00000023014	mtrex	100	82.696	Fundulus_heteroclitus
MGP_SPRETEiJ_G0019775	Mtrex	100	79.350	ENSGMOG00000014702	mtrex	100	79.637	Gadus_morhua
MGP_SPRETEiJ_G0019775	Mtrex	100	91.258	ENSGALG00000014709	MTREX	86	91.451	Gallus_gallus
MGP_SPRETEiJ_G0019775	Mtrex	100	83.843	ENSGAFG00000012425	mtrex	100	83.843	Gambusia_affinis
MGP_SPRETEiJ_G0019775	Mtrex	100	79.083	ENSGACG00000016260	mtrex	96	84.891	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0019775	Mtrex	100	92.027	ENSGAGG00000020036	MTREX	100	92.027	Gopherus_agassizii
MGP_SPRETEiJ_G0019775	Mtrex	100	97.601	ENSGGOG00000001867	MTREX	100	97.601	Gorilla_gorilla
MGP_SPRETEiJ_G0019775	Mtrex	100	82.330	ENSHBUG00000006229	mtrex	100	82.218	Haplochromis_burtoni
MGP_SPRETEiJ_G0019775	Mtrex	100	96.827	ENSHGLG00000019445	SKIV2L2	100	96.827	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0019775	Mtrex	100	96.827	ENSHGLG00100011833	SKIV2L2	100	96.827	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0019775	Mtrex	91	84.420	ENSHCOG00000019995	mtrex	100	84.420	Hippocampus_comes
MGP_SPRETEiJ_G0019775	Mtrex	100	84.674	ENSIPUG00000024348	skiv2l2	100	84.512	Ictalurus_punctatus
MGP_SPRETEiJ_G0019775	Mtrex	100	97.217	ENSSTOG00000010802	MTREX	100	97.217	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0019775	Mtrex	100	91.154	ENSJJAG00000020975	Mtrex	100	91.154	Jaculus_jaculus
MGP_SPRETEiJ_G0019775	Mtrex	100	82.871	ENSKMAG00000012642	mtrex	100	82.871	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0019775	Mtrex	100	83.174	ENSLBEG00000019367	mtrex	99	85.819	Labrus_bergylta
MGP_SPRETEiJ_G0019775	Mtrex	100	88.280	ENSLACG00000009075	MTREX	100	87.847	Latimeria_chalumnae
MGP_SPRETEiJ_G0019775	Mtrex	100	87.236	ENSLOCG00000010186	mtrex	100	87.044	Lepisosteus_oculatus
MGP_SPRETEiJ_G0019775	Mtrex	99	94.434	ENSLAFG00000010497	MTREX	100	94.530	Loxodonta_africana
MGP_SPRETEiJ_G0019775	Mtrex	100	97.409	ENSMFAG00000031610	MTREX	100	97.409	Macaca_fascicularis
MGP_SPRETEiJ_G0019775	Mtrex	100	96.264	ENSMMUG00000010379	MTREX	100	96.264	Macaca_mulatta
MGP_SPRETEiJ_G0019775	Mtrex	100	97.409	ENSMNEG00000032746	MTREX	100	97.409	Macaca_nemestrina
MGP_SPRETEiJ_G0019775	Mtrex	100	97.409	ENSMLEG00000041051	MTREX	100	97.409	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0019775	Mtrex	95	86.203	ENSMAMG00000016753	mtrex	96	88.309	Mastacembelus_armatus
MGP_SPRETEiJ_G0019775	Mtrex	100	82.330	ENSMZEG00005000414	mtrex	100	82.218	Maylandia_zebra
MGP_SPRETEiJ_G0019775	Mtrex	95	68.016	ENSMGAG00000003980	MTREX	99	68.016	Meleagris_gallopavo
MGP_SPRETEiJ_G0019775	Mtrex	100	98.271	ENSMAUG00000010727	Mtrex	100	98.271	Mesocricetus_auratus
MGP_SPRETEiJ_G0019775	Mtrex	100	97.793	ENSMICG00000012779	MTREX	100	97.793	Microcebus_murinus
MGP_SPRETEiJ_G0019775	Mtrex	100	98.369	ENSMOCG00000019886	Mtrex	100	98.369	Microtus_ochrogaster
MGP_SPRETEiJ_G0019775	Mtrex	100	81.644	ENSMMOG00000002476	mtrex	100	81.931	Mola_mola
MGP_SPRETEiJ_G0019775	Mtrex	100	93.269	ENSMODG00000019494	MTREX	100	93.558	Monodelphis_domestica
MGP_SPRETEiJ_G0019775	Mtrex	92	81.986	ENSMALG00000002917	mtrex	99	81.986	Monopterus_albus
MGP_SPRETEiJ_G0019775	Mtrex	100	99.423	MGP_CAROLIEiJ_G0018896	Mtrex	100	99.423	Mus_caroli
MGP_SPRETEiJ_G0019775	Mtrex	100	100.000	ENSMUSG00000016018	Mtrex	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0019775	Mtrex	100	99.038	MGP_PahariEiJ_G0015967	Mtrex	100	99.038	Mus_pahari
MGP_SPRETEiJ_G0019775	Mtrex	100	97.313	ENSMPUG00000007619	MTREX	100	97.313	Mustela_putorius_furo
MGP_SPRETEiJ_G0019775	Mtrex	100	96.165	ENSMLUG00000001152	MTREX	100	96.165	Myotis_lucifugus
MGP_SPRETEiJ_G0019775	Mtrex	100	98.081	ENSNGAG00000011938	Mtrex	100	98.081	Nannospalax_galili
MGP_SPRETEiJ_G0019775	Mtrex	100	82.426	ENSNBRG00000011293	mtrex	100	82.314	Neolamprologus_brichardi
MGP_SPRETEiJ_G0019775	Mtrex	100	93.295	ENSNLEG00000001494	MTREX	100	93.391	Nomascus_leucogenys
MGP_SPRETEiJ_G0019775	Mtrex	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
MGP_SPRETEiJ_G0019775	Mtrex	100	82.212	ENSOPRG00000008009	MTREX	100	82.212	Ochotona_princeps
MGP_SPRETEiJ_G0019775	Mtrex	100	95.969	ENSODEG00000017234	MTREX	100	96.065	Octodon_degus
MGP_SPRETEiJ_G0019775	Mtrex	100	82.235	ENSONIG00000007587	mtrex	100	82.409	Oreochromis_niloticus
MGP_SPRETEiJ_G0019775	Mtrex	100	97.500	ENSOCUG00000004463	MTREX	100	97.500	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0019775	Mtrex	100	82.459	ENSORLG00000005443	mtrex	100	82.330	Oryzias_latipes
MGP_SPRETEiJ_G0019775	Mtrex	100	82.364	ENSORLG00020006329	mtrex	100	82.235	Oryzias_latipes_hni
MGP_SPRETEiJ_G0019775	Mtrex	100	82.269	ENSORLG00015012924	mtrex	100	82.235	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0019775	Mtrex	100	81.602	ENSOMEG00000008825	mtrex	100	81.775	Oryzias_melastigma
MGP_SPRETEiJ_G0019775	Mtrex	100	97.409	ENSOGAG00000002886	MTREX	100	97.409	Otolemur_garnettii
MGP_SPRETEiJ_G0019775	Mtrex	100	96.842	ENSOARG00000007764	MTREX	100	96.842	Ovis_aries
MGP_SPRETEiJ_G0019775	Mtrex	100	97.505	ENSPPAG00000039291	MTREX	100	97.505	Pan_paniscus
MGP_SPRETEiJ_G0019775	Mtrex	100	97.121	ENSPPRG00000019701	MTREX	100	97.121	Panthera_pardus
MGP_SPRETEiJ_G0019775	Mtrex	100	95.585	ENSPTIG00000009313	MTREX	100	95.489	Panthera_tigris_altaica
MGP_SPRETEiJ_G0019775	Mtrex	100	97.505	ENSPTRG00000016878	MTREX	100	97.505	Pan_troglodytes
MGP_SPRETEiJ_G0019775	Mtrex	100	97.313	ENSPANG00000009697	MTREX	100	97.313	Papio_anubis
MGP_SPRETEiJ_G0019775	Mtrex	100	86.699	ENSPKIG00000020833	mtrex	100	86.699	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0019775	Mtrex	100	90.840	ENSPSIG00000012150	MTREX	100	92.507	Pelodiscus_sinensis
MGP_SPRETEiJ_G0019775	Mtrex	100	81.375	ENSPMGG00000002582	mtrex	100	81.375	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0019775	Mtrex	95	65.528	ENSPMAG00000009668	mtrex	100	65.292	Petromyzon_marinus
MGP_SPRETEiJ_G0019775	Mtrex	91	96.515	ENSPCIG00000024730	MTREX	100	96.515	Phascolarctos_cinereus
MGP_SPRETEiJ_G0019775	Mtrex	75	87.072	ENSPFOG00000003141	mtrex	100	87.310	Poecilia_formosa
MGP_SPRETEiJ_G0019775	Mtrex	100	83.461	ENSPLAG00000021311	mtrex	100	83.828	Poecilia_latipinna
MGP_SPRETEiJ_G0019775	Mtrex	92	87.408	ENSPMEG00000010597	mtrex	99	87.723	Poecilia_mexicana
MGP_SPRETEiJ_G0019775	Mtrex	100	83.270	ENSPREG00000003089	mtrex	100	83.636	Poecilia_reticulata
MGP_SPRETEiJ_G0019775	Mtrex	98	97.561	ENSPPYG00000015469	MTREX	98	97.561	Pongo_abelii
MGP_SPRETEiJ_G0019775	Mtrex	94	82.791	ENSPCAG00000013120	MTREX	94	82.791	Procavia_capensis
MGP_SPRETEiJ_G0019775	Mtrex	99	91.992	ENSPCOG00000018092	MTREX	100	91.992	Propithecus_coquereli
MGP_SPRETEiJ_G0019775	Mtrex	100	97.313	ENSPVAG00000002445	MTREX	100	97.313	Pteropus_vampyrus
MGP_SPRETEiJ_G0019775	Mtrex	100	82.235	ENSPNYG00000006164	mtrex	100	82.122	Pundamilia_nyererei
MGP_SPRETEiJ_G0019775	Mtrex	100	85.646	ENSPNAG00000008794	mtrex	100	85.646	Pygocentrus_nattereri
MGP_SPRETEiJ_G0019775	Mtrex	99	98.542	ENSRNOG00000010125	Mtrex	97	98.542	Rattus_norvegicus
MGP_SPRETEiJ_G0019775	Mtrex	100	95.681	ENSRBIG00000034930	MTREX	100	95.681	Rhinopithecus_bieti
MGP_SPRETEiJ_G0019775	Mtrex	100	97.409	ENSRROG00000039895	MTREX	100	97.409	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0019775	Mtrex	90	55.870	YJL050W	MTR4	89	55.870	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0019775	Mtrex	100	97.217	ENSSBOG00000026693	MTREX	100	97.217	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0019775	Mtrex	96	95.186	ENSSHAG00000004600	MTREX	100	95.186	Sarcophilus_harrisii
MGP_SPRETEiJ_G0019775	Mtrex	100	87.548	ENSSFOG00015014355	skiv2l2	100	87.548	Scleropages_formosus
MGP_SPRETEiJ_G0019775	Mtrex	100	82.634	ENSSMAG00000007572	mtrex	100	82.792	Scophthalmus_maximus
MGP_SPRETEiJ_G0019775	Mtrex	100	83.302	ENSSDUG00000023789	mtrex	100	83.365	Seriola_dumerili
MGP_SPRETEiJ_G0019775	Mtrex	100	83.078	ENSSLDG00000006301	mtrex	100	83.078	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0019775	Mtrex	100	93.858	ENSSARG00000008387	MTREX	100	93.858	Sorex_araneus
MGP_SPRETEiJ_G0019775	Mtrex	100	79.635	ENSSPUG00000007071	MTREX	100	79.635	Sphenodon_punctatus
MGP_SPRETEiJ_G0019775	Mtrex	100	81.635	ENSSPAG00000011319	mtrex	100	82.019	Stegastes_partitus
MGP_SPRETEiJ_G0019775	Mtrex	100	97.121	ENSSSCG00000016911	MTREX	100	97.121	Sus_scrofa
MGP_SPRETEiJ_G0019775	Mtrex	100	90.010	ENSTGUG00000002480	MTREX	100	89.808	Taeniopygia_guttata
MGP_SPRETEiJ_G0019775	Mtrex	100	82.887	ENSTRUG00000014571	mtrex	100	82.887	Takifugu_rubripes
MGP_SPRETEiJ_G0019775	Mtrex	100	81.190	ENSTBEG00000007769	MTREX	100	81.478	Tupaia_belangeri
MGP_SPRETEiJ_G0019775	Mtrex	100	97.115	ENSTTRG00000008678	MTREX	100	97.115	Tursiops_truncatus
MGP_SPRETEiJ_G0019775	Mtrex	100	97.025	ENSUAMG00000023061	MTREX	100	97.025	Ursus_americanus
MGP_SPRETEiJ_G0019775	Mtrex	100	96.456	ENSUMAG00000009373	MTREX	99	99.080	Ursus_maritimus
MGP_SPRETEiJ_G0019775	Mtrex	100	86.180	ENSVPAG00000011174	MTREX	100	86.084	Vicugna_pacos
MGP_SPRETEiJ_G0019775	Mtrex	100	97.313	ENSVVUG00000021337	MTREX	100	97.313	Vulpes_vulpes
MGP_SPRETEiJ_G0019775	Mtrex	100	88.410	ENSXETG00000032798	MTREX	100	88.410	Xenopus_tropicalis
MGP_SPRETEiJ_G0019775	Mtrex	100	83.541	ENSXMAG00000004799	mtrex	100	83.541	Xiphophorus_maculatus