EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0019894 (Gene tree)
Gene ID: -
Gene Symbol: Polr3a
Alias: 9330175N20Rik|RPC1|RPC155
Full Name: polymerase (RNA) III (DNA directed) polypeptide A
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 52223 bases
Position: chr14:17186393-17238615
Accession: 2681836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0037532	RNA_pol_Rpb1_5	PF04998.17	5.7e-88	1	1
MGP_SPRETEiJ_P0037532	RNA_pol_Rpb1_4	PF05000.17	9.5e-32	1	1
MGP_SPRETEiJ_P0037532	RNA_pol_Rpb1_2	PF00623.20	1.6e-74	1	1
MGP_SPRETEiJ_P0037532	RNA_pol_Rpb1_3	PF04983.18	9.1e-42	1	1
MGP_SPRETEiJ_P0037532	RNA_pol_Rpb1_1	PF04997.12	9.5e-75	1	2
MGP_SPRETEiJ_P0037532	RNA_pol_Rpb1_1	PF04997.12	9.5e-75	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0037532	-	4592	-	MGP_SPRETEiJ_P0037532	1358 (aa)	-	-
MGP_SPRETEiJ_T0037531	-	2985	-	MGP_SPRETEiJ_P0037531	953 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0019894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0019894's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0019894	Polr3a	72	32.551	MGP_SPRETEiJ_G0029499	Polr1a	67	30.539
MGP_SPRETEiJ_G0019894	Polr3a	91	36.553	MGP_SPRETEiJ_G0017423	Polr2a	67	36.685

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSG00000148606	POLR3A	98	98.734	Homo_sapiens
MGP_SPRETEiJ_G0019894	Polr3a	56	95.050	ENSAPOG00000022727	polr3a	99	82.114	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSAMEG00000017801	POLR3A	100	95.406	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSACIG00000024504	polr3a	97	87.664	Amphilophus_citrinellus
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSAOCG00000002071	polr3a	100	87.770	Amphiprion_ocellaris
MGP_SPRETEiJ_G0019894	Polr3a	95	97.531	ENSAOCG00000003949	-	100	85.538	Amphiprion_ocellaris
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSAPEG00000001966	-	100	87.626	Amphiprion_percula
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSAPEG00000013351	polr3a	100	87.770	Amphiprion_percula
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSATEG00000023277	polr3a	100	87.194	Anabas_testudineus
MGP_SPRETEiJ_G0019894	Polr3a	97	98.020	ENSAPLG00000015878	POLR3A	99	93.236	Anas_platyrhynchos
MGP_SPRETEiJ_G0019894	Polr3a	98	99.010	ENSACAG00000007985	POLR3A	99	90.527	Anolis_carolinensis
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSANAG00000028922	POLR3A	96	99.363	Aotus_nancymaae
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSACLG00000005914	polr3a	100	86.763	Astatotilapia_calliptera
MGP_SPRETEiJ_G0019894	Polr3a	100	86.232	ENSAMXG00000018852	polr3a	100	86.232	Astyanax_mexicanus
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSBTAG00000013259	POLR3A	100	95.468	Bos_taurus
MGP_SPRETEiJ_G0019894	Polr3a	92	70.000	WBGene00004411	rpc-1	99	55.018	Caenorhabditis_elegans
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSCJAG00000001015	POLR3A	100	95.540	Callithrix_jacchus
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSCAFG00000015546	POLR3A	100	95.683	Canis_familiaris
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSCAFG00020014711	POLR3A	100	95.683	Canis_lupus_dingo
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSCHIG00000000352	POLR3A	100	95.036	Capra_hircus
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSTSYG00000006671	POLR3A	100	95.108	Carlito_syrichta
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSCAPG00000016031	POLR3A	100	94.764	Cavia_aperea
MGP_SPRETEiJ_G0019894	Polr3a	97	100.000	ENSCPOG00000022387	POLR3A	100	94.820	Cavia_porcellus
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSCCAG00000032995	POLR3A	96	98.734	Cebus_capucinus
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSCATG00000035842	POLR3A	98	98.734	Cercocebus_atys
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSCLAG00000009629	POLR3A	100	94.532	Chinchilla_lanigera
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSCSAG00000009292	POLR3A	100	95.468	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0019894	Polr3a	82	99.010	ENSCHOG00000008368	POLR3A	93	87.818	Choloepus_hoffmanni
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSCPBG00000002079	POLR3A	99	92.297	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0019894	Polr3a	97	77.966	ENSCSAVG00000009925	-	99	67.075	Ciona_savignyi
MGP_SPRETEiJ_G0019894	Polr3a	88	96.535	ENSCANG00000041071	POLR3A	100	96.535	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0019894	Polr3a	78	99.359	ENSCGRG00001015599	-	92	99.359	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0019894	Polr3a	88	95.699	ENSCGRG00000001019	Polr3a	100	95.699	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	ENSCSEG00000016653	polr3a	100	87.338	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSCVAG00000023049	polr3a	100	86.835	Cyprinodon_variegatus
MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	ENSDARG00000102569	polr3a	99	87.896	Danio_rerio
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSDNOG00000010194	POLR3A	100	94.820	Dasypus_novemcinctus
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSDORG00000000184	Polr3a	100	95.755	Dipodomys_ordii
MGP_SPRETEiJ_G0019894	Polr3a	93	69.828	FBgn0030687	CG17209	99	55.499	Drosophila_melanogaster
MGP_SPRETEiJ_G0019894	Polr3a	87	97.166	ENSETEG00000007477	POLR3A	86	97.166	Echinops_telfairi
MGP_SPRETEiJ_G0019894	Polr3a	56	81.102	ENSEBUG00000013761	polr3a	98	72.951	Eptatretus_burgeri
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSEASG00005023053	POLR3A	100	95.755	Equus_asinus_asinus
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSECAG00000019416	POLR3A	100	95.249	Equus_caballus
MGP_SPRETEiJ_G0019894	Polr3a	93	99.010	ENSEEUG00000001774	POLR3A	100	90.455	Erinaceus_europaeus
MGP_SPRETEiJ_G0019894	Polr3a	97	97.030	ENSELUG00000014016	polr3a	100	85.355	Esox_lucius
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSFCAG00000000843	POLR3A	100	95.899	Felis_catus
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSFALG00000006913	POLR3A	100	93.027	Ficedula_albicollis
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSFDAG00000007813	POLR3A	100	94.820	Fukomys_damarensis
MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	ENSFHEG00000011922	polr3a	99	89.605	Fundulus_heteroclitus
MGP_SPRETEiJ_G0019894	Polr3a	97	94.059	ENSGMOG00000000291	polr3a	99	82.166	Gadus_morhua
MGP_SPRETEiJ_G0019894	Polr3a	97	98.020	ENSGALG00000004947	POLR3A	100	93.381	Gallus_gallus
MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	ENSGAFG00000005112	polr3a	100	86.906	Gambusia_affinis
MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	ENSGACG00000002304	polr3a	100	86.619	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSGAGG00000010386	POLR3A	98	92.430	Gopherus_agassizii
MGP_SPRETEiJ_G0019894	Polr3a	99	94.436	ENSGGOG00000027729	POLR3A	98	98.734	Gorilla_gorilla
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSHBUG00000018098	polr3a	100	86.763	Haplochromis_burtoni
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSHGLG00000017899	POLR3A	100	94.964	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSHGLG00100008483	POLR3A	100	94.964	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSHCOG00000001075	polr3a	100	86.403	Hippocampus_comes
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSSTOG00000012983	POLR3A	100	95.755	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSKMAG00000015290	polr3a	100	87.194	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	ENSLBEG00000017214	polr3a	99	86.177	Labrus_bergylta
MGP_SPRETEiJ_G0019894	Polr3a	93	96.040	ENSLACG00000018557	POLR3A	99	87.138	Latimeria_chalumnae
MGP_SPRETEiJ_G0019894	Polr3a	97	97.030	ENSLOCG00000004942	polr3a	100	89.160	Lepisosteus_oculatus
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSLAFG00000016719	POLR3A	100	93.746	Loxodonta_africana
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSMFAG00000032218	POLR3A	100	95.396	Macaca_fascicularis
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSMMUG00000005514	POLR3A	98	98.734	Macaca_mulatta
MGP_SPRETEiJ_G0019894	Polr3a	99	88.134	ENSMNEG00000035163	POLR3A	99	94.662	Macaca_nemestrina
MGP_SPRETEiJ_G0019894	Polr3a	100	90.805	ENSMLEG00000030014	POLR3A	98	98.734	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSMAMG00000017497	polr3a	100	87.050	Mastacembelus_armatus
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSMZEG00005000576	polr3a	100	86.763	Maylandia_zebra
MGP_SPRETEiJ_G0019894	Polr3a	81	97.059	ENSMGAG00000005713	-	100	75.000	Meleagris_gallopavo
MGP_SPRETEiJ_G0019894	Polr3a	97	98.039	ENSMAUG00000016247	Polr3a	100	94.604	Mesocricetus_auratus
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSMICG00000005937	POLR3A	100	95.755	Microcebus_murinus
MGP_SPRETEiJ_G0019894	Polr3a	100	96.619	ENSMOCG00000012185	Polr3a	100	96.619	Microtus_ochrogaster
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSMMOG00000013822	polr3a	100	86.403	Mola_mola
MGP_SPRETEiJ_G0019894	Polr3a	97	98.039	ENSMODG00000001036	POLR3A	100	94.388	Monodelphis_domestica
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSMALG00000001249	polr3a	100	86.547	Monopterus_albus
MGP_SPRETEiJ_G0019894	Polr3a	100	97.410	MGP_CAROLIEiJ_G0019016	Polr3a	100	97.410	Mus_caroli
MGP_SPRETEiJ_G0019894	Polr3a	100	97.266	ENSMUSG00000025280	Polr3a	100	97.266	Mus_musculus
MGP_SPRETEiJ_G0019894	Polr3a	100	97.266	MGP_PahariEiJ_G0030029	Polr3a	100	97.266	Mus_pahari
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSMPUG00000003790	POLR3A	100	95.007	Mustela_putorius_furo
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSMLUG00000011522	POLR3A	100	94.676	Myotis_lucifugus
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSNGAG00000015863	Polr3a	100	94.245	Nannospalax_galili
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSNBRG00000014262	polr3a	100	85.468	Neolamprologus_brichardi
MGP_SPRETEiJ_G0019894	Polr3a	100	83.272	ENSNLEG00000010501	POLR3A	100	83.272	Nomascus_leucogenys
MGP_SPRETEiJ_G0019894	Polr3a	86	98.182	ENSMEUG00000012446	POLR3A	100	81.527	Notamacropus_eugenii
MGP_SPRETEiJ_G0019894	Polr3a	93	99.010	ENSOPRG00000001880	-	100	90.144	Ochotona_princeps
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSODEG00000015146	POLR3A	100	93.309	Octodon_degus
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSONIG00000016129	polr3a	100	87.194	Oreochromis_niloticus
MGP_SPRETEiJ_G0019894	Polr3a	97	98.039	ENSOANG00000007013	POLR3A	100	93.645	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSOCUG00000012450	POLR3A	100	95.108	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0019894	Polr3a	97	97.000	ENSORLG00000008958	polr3a	100	87.410	Oryzias_latipes
MGP_SPRETEiJ_G0019894	Polr3a	97	97.000	ENSORLG00020007525	polr3a	98	87.630	Oryzias_latipes_hni
MGP_SPRETEiJ_G0019894	Polr3a	97	97.000	ENSORLG00015006633	polr3a	100	87.266	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0019894	Polr3a	97	97.000	ENSOMEG00000012865	polr3a	100	86.331	Oryzias_melastigma
MGP_SPRETEiJ_G0019894	Polr3a	100	95.468	ENSOGAG00000010995	POLR3A	100	95.468	Otolemur_garnettii
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSOARG00000009656	POLR3A	100	95.043	Ovis_aries
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSPPRG00000002128	POLR3A	100	95.899	Panthera_pardus
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSPTIG00000020916	POLR3A	100	95.899	Panthera_tigris_altaica
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSPTRG00000002664	POLR3A	98	98.734	Pan_troglodytes
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSPANG00000022508	POLR3A	98	98.734	Papio_anubis
MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	ENSPKIG00000008140	polr3a	100	90.158	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSPSIG00000002092	POLR3A	100	92.330	Pelodiscus_sinensis
MGP_SPRETEiJ_G0019894	Polr3a	100	96.619	ENSPEMG00000006768	Polr3a	100	96.619	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0019894	Polr3a	97	98.039	ENSPCIG00000015842	POLR3A	100	94.245	Phascolarctos_cinereus
MGP_SPRETEiJ_G0019894	Polr3a	55	90.738	ENSPFOG00000006458	polr3a	100	90.738	Poecilia_formosa
MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	ENSPLAG00000000997	polr3a	100	87.194	Poecilia_latipinna
MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	ENSPMEG00000006821	polr3a	100	87.122	Poecilia_mexicana
MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	ENSPREG00000002385	polr3a	100	87.050	Poecilia_reticulata
MGP_SPRETEiJ_G0019894	Polr3a	93	99.010	ENSPPYG00000002305	POLR3A	99	94.973	Pongo_abelii
MGP_SPRETEiJ_G0019894	Polr3a	73	98.039	ENSPCAG00000005690	POLR3A	87	80.586	Procavia_capensis
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSPCOG00000028311	POLR3A	100	95.396	Propithecus_coquereli
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSPVAG00000015553	POLR3A	100	94.317	Pteropus_vampyrus
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSPNYG00000020987	polr3a	100	86.763	Pundamilia_nyererei
MGP_SPRETEiJ_G0019894	Polr3a	97	97.030	ENSPNAG00000006629	polr3a	99	83.862	Pygocentrus_nattereri
MGP_SPRETEiJ_G0019894	Polr3a	100	96.906	ENSRNOG00000010008	Polr3a	100	96.906	Rattus_norvegicus
MGP_SPRETEiJ_G0019894	Polr3a	100	91.007	ENSRBIG00000034967	POLR3A	98	98.734	Rhinopithecus_bieti
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSRROG00000025527	POLR3A	98	98.734	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0019894	Polr3a	92	62.727	YOR116C	RPO31	99	48.929	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSSBOG00000022199	POLR3A	100	95.612	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSSHAG00000007588	POLR3A	94	94.101	Sarcophilus_harrisii
MGP_SPRETEiJ_G0019894	Polr3a	97	97.030	ENSSFOG00015014357	polr3a	100	89.065	Scleropages_formosus
MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	ENSSMAG00000001780	polr3a	100	86.835	Scophthalmus_maximus
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSSDUG00000019840	polr3a	100	87.482	Seriola_dumerili
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSSLDG00000023908	polr3a	100	87.482	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0019894	Polr3a	70	100.000	ENSSARG00000009916	POLR3A	89	98.746	Sorex_araneus
MGP_SPRETEiJ_G0019894	Polr3a	97	98.020	ENSSPUG00000013209	POLR3A	100	90.647	Sphenodon_punctatus
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSSPAG00000017712	polr3a	100	87.626	Stegastes_partitus
MGP_SPRETEiJ_G0019894	Polr3a	100	95.468	ENSSSCG00000010327	POLR3A	100	97.872	Sus_scrofa
MGP_SPRETEiJ_G0019894	Polr3a	97	98.020	ENSTGUG00000006423	-	100	92.950	Taeniopygia_guttata
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSTRUG00000013488	polr3a	100	86.547	Takifugu_rubripes
MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	ENSTNIG00000013151	polr3a	100	86.782	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0019894	Polr3a	73	96.809	ENSTBEG00000015288	POLR3A	75	96.809	Tupaia_belangeri
MGP_SPRETEiJ_G0019894	Polr3a	97	98.039	ENSTTRG00000007817	POLR3A	100	93.497	Tursiops_truncatus
MGP_SPRETEiJ_G0019894	Polr3a	97	98.020	ENSUAMG00000011283	POLR3A	100	93.309	Ursus_americanus
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSUMAG00000013913	POLR3A	100	95.683	Ursus_maritimus
MGP_SPRETEiJ_G0019894	Polr3a	92	99.010	ENSVPAG00000003285	POLR3A	100	87.273	Vicugna_pacos
MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	ENSVVUG00000025523	POLR3A	100	95.612	Vulpes_vulpes
MGP_SPRETEiJ_G0019894	Polr3a	87	97.030	ENSXETG00000018101	polr3a	100	89.307	Xenopus_tropicalis
MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	ENSXMAG00000015213	polr3a	100	86.906	Xiphophorus_maculatus