EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0020133 (Gene tree)
Gene ID: -
Gene Symbol: Sall2
Alias: Msal-2
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 17686 bases
Position: chr14:42182798-42200483
Accession: 1354373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0038346	zf-C2H2	PF00096.26	1.1e-18	1	4
MGP_SPRETEiJ_P0038346	zf-C2H2	PF00096.26	1.1e-18	2	4
MGP_SPRETEiJ_P0038346	zf-C2H2	PF00096.26	1.1e-18	3	4
MGP_SPRETEiJ_P0038346	zf-C2H2	PF00096.26	1.1e-18	4	4
MGP_SPRETEiJ_P0038346	zf-met	PF12874.7	3.4e-12	1	2
MGP_SPRETEiJ_P0038346	zf-met	PF12874.7	3.4e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0038345	-	4774	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0038346	-	5153	-	MGP_SPRETEiJ_P0038346	1004 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0020133's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0020133's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0020133	Sall2	60	59.615	MGP_SPRETEiJ_G0023357	Sall3	52	59.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0020133	Sall2	100	88.282	ENSG00000165821	SALL2	100	88.580	Homo_sapiens
MGP_SPRETEiJ_G0020133	Sall2	100	87.228	ENSAMEG00000006226	SALL2	96	87.327	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0020133	Sall2	96	85.522	ENSANAG00000031405	SALL2	92	84.695	Aotus_nancymaae
MGP_SPRETEiJ_G0020133	Sall2	98	86.943	ENSBTAG00000013249	SALL2	99	87.045	Bos_taurus
MGP_SPRETEiJ_G0020133	Sall2	100	88.305	ENSCJAG00000008855	SALL2	100	88.503	Callithrix_jacchus
MGP_SPRETEiJ_G0020133	Sall2	74	81.442	ENSCAFG00000005676	SALL2	93	75.491	Canis_familiaris
MGP_SPRETEiJ_G0020133	Sall2	80	80.764	ENSCAFG00020015273	SALL2	100	76.012	Canis_lupus_dingo
MGP_SPRETEiJ_G0020133	Sall2	100	87.363	ENSCHIG00000025803	SALL2	100	87.463	Capra_hircus
MGP_SPRETEiJ_G0020133	Sall2	98	90.935	ENSTSYG00000030220	SALL2	89	94.937	Carlito_syrichta
MGP_SPRETEiJ_G0020133	Sall2	100	85.248	ENSCPOG00000040220	SALL2	100	85.248	Cavia_porcellus
MGP_SPRETEiJ_G0020133	Sall2	100	87.711	ENSCCAG00000033278	SALL2	100	88.107	Cebus_capucinus
MGP_SPRETEiJ_G0020133	Sall2	100	88.503	ENSCATG00000045263	SALL2	100	88.801	Cercocebus_atys
MGP_SPRETEiJ_G0020133	Sall2	100	84.325	ENSCLAG00000001400	SALL2	100	85.714	Chinchilla_lanigera
MGP_SPRETEiJ_G0020133	Sall2	79	86.405	ENSCSAG00000016461	SALL2	89	86.858	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0020133	Sall2	79	55.138	ENSCPBG00000012695	SALL2	59	67.864	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0020133	Sall2	100	88.206	ENSCANG00000036872	SALL2	100	88.503	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0020133	Sall2	100	92.836	ENSCGRG00001000154	Sall2	100	92.935	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0020133	Sall2	100	92.736	ENSCGRG00000008130	Sall2	100	92.836	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0020133	Sall2	98	86.653	ENSDNOG00000032317	SALL2	99	86.754	Dasypus_novemcinctus
MGP_SPRETEiJ_G0020133	Sall2	100	85.152	ENSDORG00000030154	Sall2	100	85.251	Dipodomys_ordii
MGP_SPRETEiJ_G0020133	Sall2	100	88.206	ENSEASG00005011556	SALL2	100	88.206	Equus_asinus_asinus
MGP_SPRETEiJ_G0020133	Sall2	94	89.018	ENSECAG00000024449	SALL2	100	89.018	Equus_caballus
MGP_SPRETEiJ_G0020133	Sall2	100	87.933	ENSFCAG00000044786	SALL2	100	87.141	Felis_catus
MGP_SPRETEiJ_G0020133	Sall2	100	87.129	ENSFDAG00000014250	SALL2	100	87.228	Fukomys_damarensis
MGP_SPRETEiJ_G0020133	Sall2	79	55.194	ENSGAGG00000023048	SALL2	73	54.037	Gopherus_agassizii
MGP_SPRETEiJ_G0020133	Sall2	100	88.668	ENSGGOG00000009133	SALL2	100	88.966	Gorilla_gorilla
MGP_SPRETEiJ_G0020133	Sall2	100	88.072	ENSHGLG00000006009	SALL2	100	87.674	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0020133	Sall2	98	89.100	ENSHGLG00100000859	SALL2	99	86.547	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0020133	Sall2	100	88.569	ENSSTOG00000023637	SALL2	100	88.668	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0020133	Sall2	100	85.104	ENSJJAG00000000077	Sall2	100	84.806	Jaculus_jaculus
MGP_SPRETEiJ_G0020133	Sall2	100	87.512	ENSLAFG00000032150	SALL2	100	86.620	Loxodonta_africana
MGP_SPRETEiJ_G0020133	Sall2	100	88.503	ENSMFAG00000002687	SALL2	100	88.801	Macaca_fascicularis
MGP_SPRETEiJ_G0020133	Sall2	81	86.506	ENSMMUG00000014997	SALL2	89	87.304	Macaca_mulatta
MGP_SPRETEiJ_G0020133	Sall2	96	88.521	ENSMNEG00000030415	SALL2	93	88.831	Macaca_nemestrina
MGP_SPRETEiJ_G0020133	Sall2	100	88.603	ENSMLEG00000036462	SALL2	100	88.900	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0020133	Sall2	100	91.873	ENSMAUG00000013964	Sall2	100	91.873	Mesocricetus_auratus
MGP_SPRETEiJ_G0020133	Sall2	100	89.264	ENSMICG00000046438	SALL2	100	89.761	Microcebus_murinus
MGP_SPRETEiJ_G0020133	Sall2	100	91.741	ENSMOCG00000003410	Sall2	100	91.443	Microtus_ochrogaster
MGP_SPRETEiJ_G0020133	Sall2	99	74.682	ENSMODG00000006068	SALL2	99	74.976	Monodelphis_domestica
MGP_SPRETEiJ_G0020133	Sall2	100	99.104	MGP_CAROLIEiJ_G0019241	Sall2	100	99.104	Mus_caroli
MGP_SPRETEiJ_G0020133	Sall2	100	99.701	ENSMUSG00000049532	Sall2	100	99.701	Mus_musculus
MGP_SPRETEiJ_G0020133	Sall2	100	98.108	MGP_PahariEiJ_G0030262	Sall2	100	98.108	Mus_pahari
MGP_SPRETEiJ_G0020133	Sall2	94	86.221	ENSMPUG00000000199	SALL2	87	86.534	Mustela_putorius_furo
MGP_SPRETEiJ_G0020133	Sall2	100	86.991	ENSMLUG00000009185	SALL2	99	87.289	Myotis_lucifugus
MGP_SPRETEiJ_G0020133	Sall2	100	89.672	ENSNGAG00000014258	Sall2	100	89.672	Nannospalax_galili
MGP_SPRETEiJ_G0020133	Sall2	100	88.095	ENSNLEG00000014602	SALL2	100	88.690	Nomascus_leucogenys
MGP_SPRETEiJ_G0020133	Sall2	91	76.211	ENSMEUG00000000526	SALL2	100	76.211	Notamacropus_eugenii
MGP_SPRETEiJ_G0020133	Sall2	100	86.097	ENSODEG00000001454	SALL2	100	86.197	Octodon_degus
MGP_SPRETEiJ_G0020133	Sall2	100	85.182	ENSOCUG00000027464	SALL2	100	85.924	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0020133	Sall2	100	89.583	ENSOGAG00000031464	SALL2	100	89.583	Otolemur_garnettii
MGP_SPRETEiJ_G0020133	Sall2	100	87.065	ENSOARG00000019612	SALL2	100	86.766	Ovis_aries
MGP_SPRETEiJ_G0020133	Sall2	100	88.580	ENSPPAG00000038242	SALL2	100	88.878	Pan_paniscus
MGP_SPRETEiJ_G0020133	Sall2	100	88.404	ENSPPRG00000005572	SALL2	100	87.611	Panthera_pardus
MGP_SPRETEiJ_G0020133	Sall2	100	85.714	ENSPTIG00000018399	SALL2	100	84.921	Panthera_tigris_altaica
MGP_SPRETEiJ_G0020133	Sall2	100	88.580	ENSPTRG00000006128	SALL2	100	88.878	Pan_troglodytes
MGP_SPRETEiJ_G0020133	Sall2	100	88.603	ENSPANG00000020006	SALL2	100	88.801	Papio_anubis
MGP_SPRETEiJ_G0020133	Sall2	100	92.574	ENSPEMG00000022293	Sall2	100	93.168	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0020133	Sall2	94	87.987	ENSPPYG00000005600	SALL2	91	88.303	Pongo_abelii
MGP_SPRETEiJ_G0020133	Sall2	89	86.318	ENSPCAG00000006689	SALL2	89	85.873	Procavia_capensis
MGP_SPRETEiJ_G0020133	Sall2	100	89.264	ENSPCOG00000017266	SALL2	100	89.563	Propithecus_coquereli
MGP_SPRETEiJ_G0020133	Sall2	100	83.929	ENSPVAG00000000277	SALL2	100	84.028	Pteropus_vampyrus
MGP_SPRETEiJ_G0020133	Sall2	100	96.215	ENSRNOG00000013287	Sall2	100	96.215	Rattus_norvegicus
MGP_SPRETEiJ_G0020133	Sall2	86	87.709	ENSRBIG00000009332	SALL2	100	95.833	Rhinopithecus_bieti
MGP_SPRETEiJ_G0020133	Sall2	100	80.178	ENSRROG00000035352	SALL2	100	81.269	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0020133	Sall2	100	87.810	ENSSBOG00000028539	SALL2	100	88.305	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0020133	Sall2	98	73.453	ENSSHAG00000009219	SALL2	98	73.253	Sarcophilus_harrisii
MGP_SPRETEiJ_G0020133	Sall2	54	70.270	ENSSPUG00000010045	SALL2	57	69.856	Sphenodon_punctatus
MGP_SPRETEiJ_G0020133	Sall2	96	83.299	ENSSSCG00000022705	SALL2	89	83.402	Sus_scrofa
MGP_SPRETEiJ_G0020133	Sall2	100	86.866	ENSTTRG00000012842	SALL2	100	86.468	Tursiops_truncatus
MGP_SPRETEiJ_G0020133	Sall2	90	86.549	ENSUAMG00000028082	SALL2	87	86.770	Ursus_americanus
MGP_SPRETEiJ_G0020133	Sall2	100	83.746	ENSUMAG00000004963	SALL2	100	83.746	Ursus_maritimus