EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0020228 (Gene tree)
Gene ID: -
Gene Symbol: Rnf17
Alias: MMIP-2
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 120882 bases
Position: chr14:46485284-46606165
Accession: 1353419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0038651	TUDOR	PF00567.24	2.2e-83	1	5
MGP_SPRETEiJ_P0038651	TUDOR	PF00567.24	2.2e-83	2	5
MGP_SPRETEiJ_P0038651	TUDOR	PF00567.24	2.2e-83	3	5
MGP_SPRETEiJ_P0038651	TUDOR	PF00567.24	2.2e-83	4	5
MGP_SPRETEiJ_P0038651	TUDOR	PF00567.24	2.2e-83	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0038651	-	5147	-	MGP_SPRETEiJ_P0038651	1640 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0020228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0020228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0020228	Rnf17	100	73.881	ENSG00000132972	RNF17	99	79.508	Homo_sapiens
MGP_SPRETEiJ_G0020228	Rnf17	85	32.100	ENSAPOG00000017034	rnf17	75	35.419	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0020228	Rnf17	100	76.211	ENSAMEG00000017340	RNF17	100	76.211	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0020228	Rnf17	99	32.553	ENSAOCG00000018283	rnf17	99	32.598	Amphiprion_ocellaris
MGP_SPRETEiJ_G0020228	Rnf17	73	34.876	ENSAPEG00000022338	rnf17	83	34.682	Amphiprion_percula
MGP_SPRETEiJ_G0020228	Rnf17	86	32.734	ENSATEG00000002067	rnf17	97	33.010	Anabas_testudineus
MGP_SPRETEiJ_G0020228	Rnf17	88	47.888	ENSAPLG00000003969	RNF17	100	48.464	Anas_platyrhynchos
MGP_SPRETEiJ_G0020228	Rnf17	91	46.108	ENSACAG00000001418	RNF17	92	46.108	Anolis_carolinensis
MGP_SPRETEiJ_G0020228	Rnf17	92	70.044	ENSANAG00000029969	RNF17	95	70.044	Aotus_nancymaae
MGP_SPRETEiJ_G0020228	Rnf17	91	34.377	ENSACLG00000018279	rnf17	90	35.036	Astatotilapia_calliptera
MGP_SPRETEiJ_G0020228	Rnf17	87	34.539	ENSAMXG00000011002	rnf17	96	34.539	Astyanax_mexicanus
MGP_SPRETEiJ_G0020228	Rnf17	59	76.855	ENSBTAG00000000278	RNF17	100	76.855	Bos_taurus
MGP_SPRETEiJ_G0020228	Rnf17	100	72.612	ENSCJAG00000018937	RNF17	100	72.889	Callithrix_jacchus
MGP_SPRETEiJ_G0020228	Rnf17	98	75.958	ENSCAFG00000007418	RNF17	100	79.400	Canis_familiaris
MGP_SPRETEiJ_G0020228	Rnf17	51	82.988	ENSCAFG00020002919	-	100	82.988	Canis_lupus_dingo
MGP_SPRETEiJ_G0020228	Rnf17	92	78.529	ENSCHIG00000026716	RNF17	99	78.380	Capra_hircus
MGP_SPRETEiJ_G0020228	Rnf17	97	72.795	ENSTSYG00000000365	RNF17	99	72.795	Carlito_syrichta
MGP_SPRETEiJ_G0020228	Rnf17	82	66.804	ENSCAPG00000012908	RNF17	99	66.804	Cavia_aperea
MGP_SPRETEiJ_G0020228	Rnf17	100	72.656	ENSCCAG00000026725	RNF17	99	73.037	Cebus_capucinus
MGP_SPRETEiJ_G0020228	Rnf17	100	73.519	ENSCATG00000040352	RNF17	100	74.661	Cercocebus_atys
MGP_SPRETEiJ_G0020228	Rnf17	100	75.669	ENSCLAG00000004127	RNF17	100	75.669	Chinchilla_lanigera
MGP_SPRETEiJ_G0020228	Rnf17	100	73.519	ENSCSAG00000018019	RNF17	100	73.519	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0020228	Rnf17	90	80.508	ENSCHOG00000013310	RNF17	91	80.508	Choloepus_hoffmanni
MGP_SPRETEiJ_G0020228	Rnf17	91	56.698	ENSCPBG00000020920	RNF17	96	56.963	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0020228	Rnf17	99	72.898	ENSCANG00000032927	RNF17	99	74.662	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0020228	Rnf17	100	90.195	ENSCGRG00001022658	Rnf17	100	90.195	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0020228	Rnf17	100	90.195	ENSCGRG00000009924	Rnf17	100	90.195	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0020228	Rnf17	66	33.453	ENSCSEG00000008626	rnf17	77	33.303	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0020228	Rnf17	64	36.212	ENSCVAG00000017008	rnf17	81	36.212	Cyprinodon_variegatus
MGP_SPRETEiJ_G0020228	Rnf17	98	31.893	ENSDARG00000056387	rnf17	92	34.628	Danio_rerio
MGP_SPRETEiJ_G0020228	Rnf17	99	75.546	ENSDNOG00000006115	RNF17	99	75.546	Dasypus_novemcinctus
MGP_SPRETEiJ_G0020228	Rnf17	73	87.500	ENSETEG00000017874	-	73	87.500	Echinops_telfairi
MGP_SPRETEiJ_G0020228	Rnf17	100	77.744	ENSECAG00000017152	RNF17	99	77.744	Equus_caballus
MGP_SPRETEiJ_G0020228	Rnf17	83	64.481	ENSEEUG00000000332	RNF17	90	64.481	Erinaceus_europaeus
MGP_SPRETEiJ_G0020228	Rnf17	87	36.568	ENSELUG00000005626	rnf17	89	36.568	Esox_lucius
MGP_SPRETEiJ_G0020228	Rnf17	100	76.346	ENSFCAG00000004914	RNF17	100	77.860	Felis_catus
MGP_SPRETEiJ_G0020228	Rnf17	86	50.000	ENSFALG00000008766	RNF17	90	50.942	Ficedula_albicollis
MGP_SPRETEiJ_G0020228	Rnf17	100	74.652	ENSFDAG00000017857	RNF17	100	74.652	Fukomys_damarensis
MGP_SPRETEiJ_G0020228	Rnf17	97	31.547	ENSFHEG00000014822	rnf17	98	31.432	Fundulus_heteroclitus
MGP_SPRETEiJ_G0020228	Rnf17	60	35.743	ENSGMOG00000015560	-	97	35.743	Gadus_morhua
MGP_SPRETEiJ_G0020228	Rnf17	73	33.416	ENSGAFG00000004463	rnf17	89	33.553	Gambusia_affinis
MGP_SPRETEiJ_G0020228	Rnf17	92	54.711	ENSGAGG00000016999	RNF17	90	55.004	Gopherus_agassizii
MGP_SPRETEiJ_G0020228	Rnf17	100	73.942	ENSGGOG00000014491	RNF17	100	78.238	Gorilla_gorilla
MGP_SPRETEiJ_G0020228	Rnf17	91	34.380	ENSHBUG00000003554	rnf17	90	34.797	Haplochromis_burtoni
MGP_SPRETEiJ_G0020228	Rnf17	100	75.743	ENSHGLG00000007270	RNF17	100	75.743	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0020228	Rnf17	100	75.622	ENSHGLG00100017393	RNF17	100	75.622	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0020228	Rnf17	62	41.304	ENSHCOG00000017676	rnf17	78	41.304	Hippocampus_comes
MGP_SPRETEiJ_G0020228	Rnf17	73	35.502	ENSIPUG00000001087	rnf17	80	35.502	Ictalurus_punctatus
MGP_SPRETEiJ_G0020228	Rnf17	53	72.849	ENSSTOG00000011255	-	100	72.849	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0020228	Rnf17	100	80.194	ENSJJAG00000016584	Rnf17	100	80.194	Jaculus_jaculus
MGP_SPRETEiJ_G0020228	Rnf17	89	34.837	ENSKMAG00000013403	rnf17	90	34.837	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0020228	Rnf17	87	31.049	ENSLBEG00000014910	rnf17	94	30.970	Labrus_bergylta
MGP_SPRETEiJ_G0020228	Rnf17	88	45.953	ENSLACG00000000323	RNF17	99	45.953	Latimeria_chalumnae
MGP_SPRETEiJ_G0020228	Rnf17	97	30.400	ENSLOCG00000010768	rnf17	98	30.689	Lepisosteus_oculatus
MGP_SPRETEiJ_G0020228	Rnf17	100	73.579	ENSMFAG00000032388	RNF17	100	75.000	Macaca_fascicularis
MGP_SPRETEiJ_G0020228	Rnf17	100	74.667	ENSMMUG00000014610	RNF17	100	78.020	Macaca_mulatta
MGP_SPRETEiJ_G0020228	Rnf17	100	73.519	ENSMNEG00000011234	RNF17	100	77.944	Macaca_nemestrina
MGP_SPRETEiJ_G0020228	Rnf17	100	73.277	ENSMLEG00000030227	RNF17	100	74.775	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0020228	Rnf17	73	34.050	ENSMAMG00000020403	rnf17	86	34.050	Mastacembelus_armatus
MGP_SPRETEiJ_G0020228	Rnf17	91	34.456	ENSMZEG00005019166	rnf17	90	34.874	Maylandia_zebra
MGP_SPRETEiJ_G0020228	Rnf17	76	49.409	ENSMGAG00000015138	RNF17	100	49.409	Meleagris_gallopavo
MGP_SPRETEiJ_G0020228	Rnf17	99	86.280	ENSMAUG00000004788	Rnf17	99	86.280	Mesocricetus_auratus
MGP_SPRETEiJ_G0020228	Rnf17	100	76.951	ENSMICG00000010364	RNF17	100	76.951	Microcebus_murinus
MGP_SPRETEiJ_G0020228	Rnf17	59	89.723	ENSMOCG00000011818	-	100	89.723	Microtus_ochrogaster
MGP_SPRETEiJ_G0020228	Rnf17	69	41.753	ENSMMOG00000019514	rnf17	81	41.753	Mola_mola
MGP_SPRETEiJ_G0020228	Rnf17	99	66.340	ENSMODG00000007827	RNF17	98	65.957	Monodelphis_domestica
MGP_SPRETEiJ_G0020228	Rnf17	85	32.448	ENSMALG00000016943	rnf17	94	32.283	Monopterus_albus
MGP_SPRETEiJ_G0020228	Rnf17	100	98.049	MGP_CAROLIEiJ_G0019337	Rnf17	100	98.049	Mus_caroli
MGP_SPRETEiJ_G0020228	Rnf17	100	99.390	ENSMUSG00000000365	Rnf17	100	99.390	Mus_musculus
MGP_SPRETEiJ_G0020228	Rnf17	100	95.366	MGP_PahariEiJ_G0030355	Rnf17	100	95.366	Mus_pahari
MGP_SPRETEiJ_G0020228	Rnf17	100	76.774	ENSMPUG00000013305	RNF17	100	76.774	Mustela_putorius_furo
MGP_SPRETEiJ_G0020228	Rnf17	100	75.408	ENSMLUG00000003903	RNF17	100	75.408	Myotis_lucifugus
MGP_SPRETEiJ_G0020228	Rnf17	100	82.450	ENSNGAG00000013553	Rnf17	100	82.450	Nannospalax_galili
MGP_SPRETEiJ_G0020228	Rnf17	73	36.412	ENSNBRG00000012006	rnf17	82	36.412	Neolamprologus_brichardi
MGP_SPRETEiJ_G0020228	Rnf17	100	73.156	ENSNLEG00000013780	RNF17	100	77.719	Nomascus_leucogenys
MGP_SPRETEiJ_G0020228	Rnf17	67	66.575	ENSMEUG00000003276	-	60	66.575	Notamacropus_eugenii
MGP_SPRETEiJ_G0020228	Rnf17	88	67.797	ENSOPRG00000016743	-	88	67.797	Ochotona_princeps
MGP_SPRETEiJ_G0020228	Rnf17	53	69.955	ENSODEG00000005443	-	100	69.955	Octodon_degus
MGP_SPRETEiJ_G0020228	Rnf17	91	34.510	ENSONIG00000015746	rnf17	99	35.170	Oreochromis_niloticus
MGP_SPRETEiJ_G0020228	Rnf17	100	76.592	ENSOCUG00000007384	RNF17	100	76.531	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0020228	Rnf17	73	36.043	ENSORLG00000012818	rnf17	84	36.043	Oryzias_latipes
MGP_SPRETEiJ_G0020228	Rnf17	87	35.967	ENSORLG00020009879	-	89	36.072	Oryzias_latipes_hni
MGP_SPRETEiJ_G0020228	Rnf17	87	35.796	ENSORLG00015013027	-	89	36.036	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0020228	Rnf17	66	33.632	ENSOMEG00000009891	rnf17	85	33.513	Oryzias_melastigma
MGP_SPRETEiJ_G0020228	Rnf17	100	74.320	ENSOGAG00000014803	RNF17	100	74.320	Otolemur_garnettii
MGP_SPRETEiJ_G0020228	Rnf17	98	76.282	ENSOARG00000014641	RNF17	99	76.158	Ovis_aries
MGP_SPRETEiJ_G0020228	Rnf17	93	78.012	ENSPPAG00000028779	RNF17	100	78.012	Pan_paniscus
MGP_SPRETEiJ_G0020228	Rnf17	100	75.983	ENSPPRG00000009230	RNF17	100	77.563	Panthera_pardus
MGP_SPRETEiJ_G0020228	Rnf17	100	75.983	ENSPTIG00000001738	RNF17	100	77.712	Panthera_tigris_altaica
MGP_SPRETEiJ_G0020228	Rnf17	100	73.761	ENSPTRG00000005713	RNF17	100	77.937	Pan_troglodytes
MGP_SPRETEiJ_G0020228	Rnf17	100	73.519	ENSPANG00000007640	RNF17	100	77.869	Papio_anubis
MGP_SPRETEiJ_G0020228	Rnf17	76	36.129	ENSPKIG00000001648	rnf17	90	36.593	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0020228	Rnf17	73	60.329	ENSPSIG00000011245	RNF17	100	60.412	Pelodiscus_sinensis
MGP_SPRETEiJ_G0020228	Rnf17	100	90.378	ENSPEMG00000008693	Rnf17	100	90.378	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0020228	Rnf17	67	65.720	ENSPCIG00000009190	-	95	65.720	Phascolarctos_cinereus
MGP_SPRETEiJ_G0020228	Rnf17	90	34.080	ENSPFOG00000007124	rnf17	87	34.375	Poecilia_formosa
MGP_SPRETEiJ_G0020228	Rnf17	97	31.669	ENSPLAG00000006198	rnf17	98	31.652	Poecilia_latipinna
MGP_SPRETEiJ_G0020228	Rnf17	97	31.790	ENSPMEG00000022432	rnf17	98	31.753	Poecilia_mexicana
MGP_SPRETEiJ_G0020228	Rnf17	73	32.510	ENSPREG00000001414	rnf17	83	32.518	Poecilia_reticulata
MGP_SPRETEiJ_G0020228	Rnf17	100	73.821	ENSPPYG00000005215	RNF17	100	73.821	Pongo_abelii
MGP_SPRETEiJ_G0020228	Rnf17	72	84.211	ENSPCAG00000002665	RNF17	76	84.211	Procavia_capensis
MGP_SPRETEiJ_G0020228	Rnf17	91	61.141	ENSPCOG00000020211	RNF17	95	61.141	Propithecus_coquereli
MGP_SPRETEiJ_G0020228	Rnf17	100	66.529	ENSPVAG00000013021	RNF17	100	66.529	Pteropus_vampyrus
MGP_SPRETEiJ_G0020228	Rnf17	73	35.251	ENSPNAG00000027505	rnf17	85	35.309	Pygocentrus_nattereri
MGP_SPRETEiJ_G0020228	Rnf17	100	92.256	ENSRNOG00000008059	Rnf17	100	92.256	Rattus_norvegicus
MGP_SPRETEiJ_G0020228	Rnf17	100	71.765	ENSRBIG00000027010	RNF17	100	74.230	Rhinopithecus_bieti
MGP_SPRETEiJ_G0020228	Rnf17	100	72.672	ENSRROG00000022801	RNF17	100	77.252	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0020228	Rnf17	99	73.133	ENSSBOG00000021661	RNF17	99	73.778	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0020228	Rnf17	99	65.931	ENSSHAG00000005609	RNF17	100	65.394	Sarcophilus_harrisii
MGP_SPRETEiJ_G0020228	Rnf17	69	47.191	ENSSFOG00015023037	rnf17	89	47.191	Scleropages_formosus
MGP_SPRETEiJ_G0020228	Rnf17	90	30.996	ENSSMAG00000007429	rnf17	75	34.737	Scophthalmus_maximus
MGP_SPRETEiJ_G0020228	Rnf17	86	31.864	ENSSDUG00000013530	rnf17	77	35.227	Seriola_dumerili
MGP_SPRETEiJ_G0020228	Rnf17	89	31.728	ENSSLDG00000019577	rnf17	75	35.402	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0020228	Rnf17	100	70.023	ENSSARG00000003016	RNF17	94	70.023	Sorex_araneus
MGP_SPRETEiJ_G0020228	Rnf17	87	51.318	ENSSPUG00000008917	RNF17	95	51.318	Sphenodon_punctatus
MGP_SPRETEiJ_G0020228	Rnf17	100	71.118	ENSSSCG00000009572	RNF17	100	76.087	Sus_scrofa
MGP_SPRETEiJ_G0020228	Rnf17	50	52.471	ENSTGUG00000011267	-	100	52.471	Taeniopygia_guttata
MGP_SPRETEiJ_G0020228	Rnf17	76	33.124	ENSTRUG00000015498	rnf17	77	33.225	Takifugu_rubripes
MGP_SPRETEiJ_G0020228	Rnf17	73	34.078	ENSTNIG00000015681	rnf17	100	34.078	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0020228	Rnf17	96	64.477	ENSTBEG00000000282	RNF17	96	64.477	Tupaia_belangeri
MGP_SPRETEiJ_G0020228	Rnf17	99	68.559	ENSTTRG00000012698	RNF17	99	68.319	Tursiops_truncatus
MGP_SPRETEiJ_G0020228	Rnf17	50	84.169	ENSUMAG00000013953	-	100	84.169	Ursus_maritimus
MGP_SPRETEiJ_G0020228	Rnf17	83	88.732	ENSVPAG00000011388	RNF17	85	88.732	Vicugna_pacos
MGP_SPRETEiJ_G0020228	Rnf17	95	82.812	ENSVVUG00000006226	RNF17	100	82.986	Vulpes_vulpes
MGP_SPRETEiJ_G0020228	Rnf17	70	41.030	ENSXETG00000034020	RNF17	100	44.681	Xenopus_tropicalis
MGP_SPRETEiJ_G0020228	Rnf17	87	30.764	ENSXCOG00000018295	rnf17	86	33.864	Xiphophorus_couchianus
MGP_SPRETEiJ_G0020228	Rnf17	87	31.027	ENSXMAG00000014747	rnf17	77	34.367	Xiphophorus_maculatus