EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0020259 (Gene tree)
Gene ID: -
Gene Symbol: Setdb2
Alias: KMT1F|LOC239122
Full Name: SET domain%2C bifurcated 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 48171 bases
Position: chr14:49582592-49630762
Accession: 2685139
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0038738	MBD	PF01429.19	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0038738	-	3011	-	MGP_SPRETEiJ_P0038738	697 (aa)	-	-
MGP_SPRETEiJ_T0038739	-	3037	-	MGP_SPRETEiJ_P0038739	708 (aa)	-	-
MGP_SPRETEiJ_T0038741	-	1788	-	MGP_SPRETEiJ_P0038741	140 (aa)	-	-
MGP_SPRETEiJ_T0038740	-	720	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0038742	-	410	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0020259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0020259's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0020259	Setdb2	100	67.655	ENSG00000136169	SETDB2	100	67.655	Homo_sapiens
MGP_SPRETEiJ_G0020259	Setdb2	55	53.763	ENSAPOG00000020220	-	87	53.763	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0020259	Setdb2	99	66.237	ENSAMEG00000003443	SETDB2	70	66.237	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0020259	Setdb2	88	32.997	ENSACIG00000009349	-	75	56.962	Amphilophus_citrinellus
MGP_SPRETEiJ_G0020259	Setdb2	75	41.304	ENSAOCG00000006560	-	84	41.304	Amphiprion_ocellaris
MGP_SPRETEiJ_G0020259	Setdb2	55	41.353	ENSAPEG00000009529	-	72	40.845	Amphiprion_percula
MGP_SPRETEiJ_G0020259	Setdb2	51	54.118	ENSATEG00000008915	-	61	54.118	Anabas_testudineus
MGP_SPRETEiJ_G0020259	Setdb2	99	44.901	ENSAPLG00000009061	SETDB2	100	44.901	Anas_platyrhynchos
MGP_SPRETEiJ_G0020259	Setdb2	100	42.857	ENSACAG00000014036	SETDB2	100	42.857	Anolis_carolinensis
MGP_SPRETEiJ_G0020259	Setdb2	90	66.405	ENSANAG00000028107	SETDB2	100	66.405	Aotus_nancymaae
MGP_SPRETEiJ_G0020259	Setdb2	75	39.041	ENSACLG00000004046	-	84	39.583	Astatotilapia_calliptera
MGP_SPRETEiJ_G0020259	Setdb2	90	33.634	ENSAMXG00000016092	setdb2	100	33.213	Astyanax_mexicanus
MGP_SPRETEiJ_G0020259	Setdb2	100	63.983	ENSBTAG00000007329	SETDB2	100	63.983	Bos_taurus
MGP_SPRETEiJ_G0020259	Setdb2	100	67.044	ENSCJAG00000008864	SETDB2	100	67.044	Callithrix_jacchus
MGP_SPRETEiJ_G0020259	Setdb2	99	64.185	ENSCAFG00000004341	SETDB2	100	64.185	Canis_familiaris
MGP_SPRETEiJ_G0020259	Setdb2	100	65.248	ENSCAFG00020020283	SETDB2	100	65.248	Canis_lupus_dingo
MGP_SPRETEiJ_G0020259	Setdb2	100	64.548	ENSCHIG00000014895	SETDB2	100	64.548	Capra_hircus
MGP_SPRETEiJ_G0020259	Setdb2	99	65.957	ENSTSYG00000014051	SETDB2	99	65.957	Carlito_syrichta
MGP_SPRETEiJ_G0020259	Setdb2	65	63.043	ENSCAPG00000014168	-	95	63.043	Cavia_aperea
MGP_SPRETEiJ_G0020259	Setdb2	92	63.093	ENSCPOG00000002194	SETDB2	97	63.093	Cavia_porcellus
MGP_SPRETEiJ_G0020259	Setdb2	100	67.185	ENSCCAG00000031604	SETDB2	100	67.185	Cebus_capucinus
MGP_SPRETEiJ_G0020259	Setdb2	100	67.090	ENSCATG00000002055	SETDB2	100	67.090	Cercocebus_atys
MGP_SPRETEiJ_G0020259	Setdb2	100	64.074	ENSCLAG00000007348	SETDB2	100	64.074	Chinchilla_lanigera
MGP_SPRETEiJ_G0020259	Setdb2	100	66.620	ENSCSAG00000017713	SETDB2	100	66.620	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0020259	Setdb2	90	42.945	ENSCPBG00000008524	SETDB2	92	41.111	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0020259	Setdb2	99	62.378	ENSCANG00000033506	SETDB2	100	62.204	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0020259	Setdb2	100	77.507	ENSCGRG00001011194	Setdb2	100	77.507	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0020259	Setdb2	100	77.507	ENSCGRG00000000801	Setdb2	100	77.507	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0020259	Setdb2	96	34.085	ENSCVAG00000004116	-	95	33.835	Cyprinodon_variegatus
MGP_SPRETEiJ_G0020259	Setdb2	58	62.295	ENSDARG00000101462	setdb2	70	62.295	Danio_rerio
MGP_SPRETEiJ_G0020259	Setdb2	100	62.639	ENSDNOG00000033679	SETDB2	100	62.639	Dasypus_novemcinctus
MGP_SPRETEiJ_G0020259	Setdb2	99	63.188	ENSDORG00000026163	Setdb2	100	63.188	Dipodomys_ordii
MGP_SPRETEiJ_G0020259	Setdb2	81	67.284	ENSETEG00000004821	SETDB2	81	67.284	Echinops_telfairi
MGP_SPRETEiJ_G0020259	Setdb2	100	67.655	ENSEASG00005017285	SETDB2	100	67.655	Equus_asinus_asinus
MGP_SPRETEiJ_G0020259	Setdb2	100	67.797	ENSECAG00000020357	SETDB2	100	67.797	Equus_caballus
MGP_SPRETEiJ_G0020259	Setdb2	99	59.664	ENSEEUG00000011247	SETDB2	100	59.664	Erinaceus_europaeus
MGP_SPRETEiJ_G0020259	Setdb2	68	58.511	ENSELUG00000024242	-	76	58.511	Esox_lucius
MGP_SPRETEiJ_G0020259	Setdb2	100	65.912	ENSFCAG00000012034	SETDB2	100	65.912	Felis_catus
MGP_SPRETEiJ_G0020259	Setdb2	99	44.611	ENSFALG00000008379	SETDB2	97	44.611	Ficedula_albicollis
MGP_SPRETEiJ_G0020259	Setdb2	99	65.049	ENSFDAG00000017408	SETDB2	100	65.049	Fukomys_damarensis
MGP_SPRETEiJ_G0020259	Setdb2	99	43.961	ENSGALG00000017006	SETDB2	97	44.290	Gallus_gallus
MGP_SPRETEiJ_G0020259	Setdb2	89	33.252	ENSGAFG00000000077	-	95	33.252	Gambusia_affinis
MGP_SPRETEiJ_G0020259	Setdb2	71	37.218	ENSGACG00000015463	-	75	37.594	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0020259	Setdb2	99	46.961	ENSGAGG00000014099	SETDB2	96	46.961	Gopherus_agassizii
MGP_SPRETEiJ_G0020259	Setdb2	100	67.797	ENSGGOG00000016016	SETDB2	100	67.797	Gorilla_gorilla
MGP_SPRETEiJ_G0020259	Setdb2	75	37.063	ENSHBUG00000001477	-	75	52.381	Haplochromis_burtoni
MGP_SPRETEiJ_G0020259	Setdb2	100	65.395	ENSHGLG00000003820	SETDB2	99	65.395	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0020259	Setdb2	100	65.254	ENSHGLG00100008642	SETDB2	99	65.254	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0020259	Setdb2	66	61.644	ENSHCOG00000007071	-	76	61.644	Hippocampus_comes
MGP_SPRETEiJ_G0020259	Setdb2	67	59.091	ENSIPUG00000011157	setdb2	79	59.091	Ictalurus_punctatus
MGP_SPRETEiJ_G0020259	Setdb2	100	67.232	ENSSTOG00000002985	SETDB2	100	67.232	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0020259	Setdb2	99	66.189	ENSJJAG00000011079	Setdb2	99	66.189	Jaculus_jaculus
MGP_SPRETEiJ_G0020259	Setdb2	67	52.273	ENSKMAG00000012100	-	75	52.273	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0020259	Setdb2	99	38.963	ENSLACG00000009640	SETDB2	99	37.728	Latimeria_chalumnae
MGP_SPRETEiJ_G0020259	Setdb2	82	53.535	ENSLOCG00000009739	-	96	34.707	Lepisosteus_oculatus
MGP_SPRETEiJ_G0020259	Setdb2	99	64.516	ENSLAFG00000012612	SETDB2	100	64.516	Loxodonta_africana
MGP_SPRETEiJ_G0020259	Setdb2	100	67.090	ENSMFAG00000032631	SETDB2	100	67.090	Macaca_fascicularis
MGP_SPRETEiJ_G0020259	Setdb2	100	67.090	ENSMMUG00000013473	SETDB2	100	67.090	Macaca_mulatta
MGP_SPRETEiJ_G0020259	Setdb2	100	67.090	ENSMNEG00000037148	SETDB2	100	67.090	Macaca_nemestrina
MGP_SPRETEiJ_G0020259	Setdb2	100	67.090	ENSMLEG00000043613	SETDB2	100	67.090	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0020259	Setdb2	55	56.522	ENSMAMG00000022781	-	82	56.522	Mastacembelus_armatus
MGP_SPRETEiJ_G0020259	Setdb2	75	39.041	ENSMZEG00005012098	-	84	39.583	Maylandia_zebra
MGP_SPRETEiJ_G0020259	Setdb2	99	45.429	ENSMGAG00000015017	SETDB2	100	45.429	Meleagris_gallopavo
MGP_SPRETEiJ_G0020259	Setdb2	100	76.791	ENSMAUG00000012871	Setdb2	100	76.791	Mesocricetus_auratus
MGP_SPRETEiJ_G0020259	Setdb2	100	65.205	ENSMICG00000012641	SETDB2	100	65.205	Microcebus_murinus
MGP_SPRETEiJ_G0020259	Setdb2	100	74.175	ENSMOCG00000021987	Setdb2	100	74.175	Microtus_ochrogaster
MGP_SPRETEiJ_G0020259	Setdb2	100	50.276	ENSMODG00000010929	SETDB2	100	50.276	Monodelphis_domestica
MGP_SPRETEiJ_G0020259	Setdb2	69	54.023	ENSMALG00000001256	-	75	54.023	Monopterus_albus
MGP_SPRETEiJ_G0020259	Setdb2	100	94.118	MGP_CAROLIEiJ_G0019367	Setdb2	100	94.118	Mus_caroli
MGP_SPRETEiJ_G0020259	Setdb2	100	97.848	ENSMUSG00000071350	Setdb2	100	97.848	Mus_musculus
MGP_SPRETEiJ_G0020259	Setdb2	100	91.679	MGP_PahariEiJ_G0030385	Setdb2	100	91.679	Mus_pahari
MGP_SPRETEiJ_G0020259	Setdb2	100	65.629	ENSMPUG00000018019	SETDB2	100	65.629	Mustela_putorius_furo
MGP_SPRETEiJ_G0020259	Setdb2	99	64.865	ENSMLUG00000004378	SETDB2	99	64.865	Myotis_lucifugus
MGP_SPRETEiJ_G0020259	Setdb2	100	72.389	ENSNGAG00000013911	Setdb2	100	72.389	Nannospalax_galili
MGP_SPRETEiJ_G0020259	Setdb2	100	67.232	ENSNLEG00000003613	SETDB2	100	67.232	Nomascus_leucogenys
MGP_SPRETEiJ_G0020259	Setdb2	93	44.802	ENSMEUG00000005220	-	100	44.802	Notamacropus_eugenii
MGP_SPRETEiJ_G0020259	Setdb2	84	67.147	ENSOPRG00000012261	SETDB2	83	67.147	Ochotona_princeps
MGP_SPRETEiJ_G0020259	Setdb2	68	48.352	ENSONIG00000009000	-	87	40.157	Oreochromis_niloticus
MGP_SPRETEiJ_G0020259	Setdb2	99	48.808	ENSOANG00000015546	SETDB2	93	49.088	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0020259	Setdb2	100	64.088	ENSOCUG00000003755	SETDB2	100	64.088	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0020259	Setdb2	69	53.933	ENSORLG00000001147	-	78	53.933	Oryzias_latipes
MGP_SPRETEiJ_G0020259	Setdb2	69	53.933	ENSORLG00020006680	-	78	53.933	Oryzias_latipes_hni
MGP_SPRETEiJ_G0020259	Setdb2	69	53.933	ENSORLG00015009952	-	78	53.933	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0020259	Setdb2	100	64.337	ENSOGAG00000005339	SETDB2	100	64.337	Otolemur_garnettii
MGP_SPRETEiJ_G0020259	Setdb2	100	64.548	ENSOARG00000008487	SETDB2	100	64.548	Ovis_aries
MGP_SPRETEiJ_G0020259	Setdb2	100	67.797	ENSPPAG00000039854	SETDB2	100	67.797	Pan_paniscus
MGP_SPRETEiJ_G0020259	Setdb2	100	66.337	ENSPPRG00000000069	SETDB2	100	66.337	Panthera_pardus
MGP_SPRETEiJ_G0020259	Setdb2	100	66.620	ENSPTIG00000006314	SETDB2	100	66.620	Panthera_tigris_altaica
MGP_SPRETEiJ_G0020259	Setdb2	100	67.655	ENSPTRG00000005873	SETDB2	100	67.655	Pan_troglodytes
MGP_SPRETEiJ_G0020259	Setdb2	100	66.949	ENSPANG00000017051	SETDB2	100	66.949	Papio_anubis
MGP_SPRETEiJ_G0020259	Setdb2	73	58.511	ENSPKIG00000009795	-	84	58.511	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0020259	Setdb2	99	44.177	ENSPSIG00000002200	SETDB2	95	44.177	Pelodiscus_sinensis
MGP_SPRETEiJ_G0020259	Setdb2	100	52.712	ENSPCIG00000002912	SETDB2	100	52.712	Phascolarctos_cinereus
MGP_SPRETEiJ_G0020259	Setdb2	89	33.007	ENSPFOG00000006673	-	94	33.007	Poecilia_formosa
MGP_SPRETEiJ_G0020259	Setdb2	89	33.252	ENSPLAG00000016914	-	94	33.252	Poecilia_latipinna
MGP_SPRETEiJ_G0020259	Setdb2	89	33.007	ENSPMEG00000003842	-	94	33.007	Poecilia_mexicana
MGP_SPRETEiJ_G0020259	Setdb2	68	53.333	ENSPREG00000022531	-	94	33.656	Poecilia_reticulata
MGP_SPRETEiJ_G0020259	Setdb2	100	67.373	ENSPPYG00000005368	SETDB2	100	67.373	Pongo_abelii
MGP_SPRETEiJ_G0020259	Setdb2	58	91.176	ENSPCAG00000010230	-	58	91.176	Procavia_capensis
MGP_SPRETEiJ_G0020259	Setdb2	93	66.415	ENSPCOG00000017644	SETDB2	99	66.314	Propithecus_coquereli
MGP_SPRETEiJ_G0020259	Setdb2	100	62.535	ENSPVAG00000006911	SETDB2	100	62.535	Pteropus_vampyrus
MGP_SPRETEiJ_G0020259	Setdb2	51	48.980	ENSPNYG00000023676	-	74	40.411	Pundamilia_nyererei
MGP_SPRETEiJ_G0020259	Setdb2	69	56.863	ENSPNAG00000011459	setdb2	81	56.863	Pygocentrus_nattereri
MGP_SPRETEiJ_G0020259	Setdb2	100	84.218	ENSRNOG00000021680	Setdb2	100	84.218	Rattus_norvegicus
MGP_SPRETEiJ_G0020259	Setdb2	100	67.232	ENSRBIG00000006562	SETDB2	100	67.232	Rhinopithecus_bieti
MGP_SPRETEiJ_G0020259	Setdb2	100	67.090	ENSRROG00000032499	SETDB2	100	67.090	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0020259	Setdb2	100	67.044	ENSSBOG00000023249	SETDB2	100	67.044	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0020259	Setdb2	100	51.857	ENSSHAG00000007281	SETDB2	100	51.994	Sarcophilus_harrisii
MGP_SPRETEiJ_G0020259	Setdb2	68	63.636	ENSSFOG00015008204	-	75	63.636	Scleropages_formosus
MGP_SPRETEiJ_G0020259	Setdb2	68	54.545	ENSSDUG00000002987	-	76	54.545	Seriola_dumerili
MGP_SPRETEiJ_G0020259	Setdb2	68	55.682	ENSSLDG00000015081	-	75	55.682	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0020259	Setdb2	100	61.277	ENSSARG00000009926	SETDB2	100	61.277	Sorex_araneus
MGP_SPRETEiJ_G0020259	Setdb2	70	41.667	ENSSPAG00000006869	-	87	41.667	Stegastes_partitus
MGP_SPRETEiJ_G0020259	Setdb2	100	65.248	ENSSSCG00000009395	SETDB2	100	65.248	Sus_scrofa
MGP_SPRETEiJ_G0020259	Setdb2	96	53.634	ENSTBEG00000008013	SETDB2	90	94.872	Tupaia_belangeri
MGP_SPRETEiJ_G0020259	Setdb2	100	63.277	ENSTTRG00000012932	SETDB2	100	63.277	Tursiops_truncatus
MGP_SPRETEiJ_G0020259	Setdb2	100	66.902	ENSUMAG00000018406	SETDB2	100	66.902	Ursus_maritimus
MGP_SPRETEiJ_G0020259	Setdb2	100	61.851	ENSVPAG00000012019	SETDB2	100	61.851	Vicugna_pacos
MGP_SPRETEiJ_G0020259	Setdb2	85	60.167	ENSVVUG00000028174	SETDB2	92	60.167	Vulpes_vulpes
MGP_SPRETEiJ_G0020259	Setdb2	99	42.313	ENSXETG00000015666	setdb2	100	42.313	Xenopus_tropicalis
MGP_SPRETEiJ_G0020259	Setdb2	52	54.444	ENSXMAG00000006323	-	65	54.444	Xiphophorus_maculatus