EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0020407 (Gene tree)
Gene ID: -
Gene Symbol: Zc3h13
Alias: 2600010B19Rik|3110050K21Rik|4930570G11Rik|C87618
Full Name: zinc finger CCCH type containing 13
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 61808 bases
Position: chr14:65820513-65882320
Accession: 1914552
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0039148	zf-CCCH	PF00642.24	2.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0039148	-	6125	-	MGP_SPRETEiJ_P0039148	1720 (aa)	-	-
MGP_SPRETEiJ_T0039149	-	5835	-	MGP_SPRETEiJ_P0039149	1721 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0020407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0020407's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0020407	Zc3h13	51	80.023	ENSG00000123200	ZC3H13	98	93.805	Homo_sapiens
MGP_SPRETEiJ_G0020407	Zc3h13	60	75.568	ENSAPLG00000002707	ZC3H13	56	78.337	Anas_platyrhynchos
MGP_SPRETEiJ_G0020407	Zc3h13	51	82.743	ENSCAFG00000004511	ZC3H13	52	82.913	Canis_familiaris
MGP_SPRETEiJ_G0020407	Zc3h13	51	82.763	ENSCAFG00020019269	ZC3H13	96	91.019	Canis_lupus_dingo
MGP_SPRETEiJ_G0020407	Zc3h13	50	79.263	ENSCHIG00000020072	ZC3H13	52	79.449	Capra_hircus
MGP_SPRETEiJ_G0020407	Zc3h13	50	82.599	ENSTSYG00000000992	ZC3H13	52	81.465	Carlito_syrichta
MGP_SPRETEiJ_G0020407	Zc3h13	51	80.565	ENSCCAG00000032728	ZC3H13	54	80.612	Cebus_capucinus
MGP_SPRETEiJ_G0020407	Zc3h13	57	90.265	ENSCHOG00000009724	ZC3H13	56	90.265	Choloepus_hoffmanni
MGP_SPRETEiJ_G0020407	Zc3h13	51	80.435	ENSDNOG00000005390	ZC3H13	52	80.597	Dasypus_novemcinctus
MGP_SPRETEiJ_G0020407	Zc3h13	51	81.600	ENSEASG00005017100	ZC3H13	52	81.193	Equus_asinus_asinus
MGP_SPRETEiJ_G0020407	Zc3h13	51	81.486	ENSECAG00000022843	ZC3H13	53	81.881	Equus_caballus
MGP_SPRETEiJ_G0020407	Zc3h13	51	81.600	ENSFCAG00000004877	ZC3H13	52	81.881	Felis_catus
MGP_SPRETEiJ_G0020407	Zc3h13	64	70.229	ENSGACG00000015166	zc3h13	51	54.757	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0020407	Zc3h13	50	83.410	ENSJJAG00000019971	Zc3h13	52	83.756	Jaculus_jaculus
MGP_SPRETEiJ_G0020407	Zc3h13	78	62.544	ENSLACG00000003806	ZC3H13	51	60.351	Latimeria_chalumnae
MGP_SPRETEiJ_G0020407	Zc3h13	60	86.398	ENSMLEG00000039387	ZC3H13	70	92.430	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0020407	Zc3h13	100	98.044	MGP_CAROLIEiJ_G0019512	Zc3h13	100	97.929	Mus_caroli
MGP_SPRETEiJ_G0020407	Zc3h13	100	98.844	ENSMUSG00000022000	Zc3h13	100	98.844	Mus_musculus
MGP_SPRETEiJ_G0020407	Zc3h13	100	97.740	MGP_PahariEiJ_G0030530	Zc3h13	100	97.740	Mus_pahari
MGP_SPRETEiJ_G0020407	Zc3h13	51	80.343	ENSMPUG00000001602	ZC3H13	51	81.537	Mustela_putorius_furo
MGP_SPRETEiJ_G0020407	Zc3h13	51	78.449	ENSMLUG00000006920	ZC3H13	52	78.784	Myotis_lucifugus
MGP_SPRETEiJ_G0020407	Zc3h13	51	81.766	ENSODEG00000005178	ZC3H13	53	81.933	Octodon_degus
MGP_SPRETEiJ_G0020407	Zc3h13	51	83.486	ENSOCUG00000015173	ZC3H13	52	83.659	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0020407	Zc3h13	50	78.917	ENSOARG00000007790	ZC3H13	52	75.648	Ovis_aries
MGP_SPRETEiJ_G0020407	Zc3h13	51	81.943	ENSPPRG00000005440	ZC3H13	52	82.225	Panthera_pardus
MGP_SPRETEiJ_G0020407	Zc3h13	51	80.343	ENSPTIG00000014867	ZC3H13	53	80.619	Panthera_tigris_altaica
MGP_SPRETEiJ_G0020407	Zc3h13	76	90.726	ENSPCAG00000001146	ZC3H13	65	91.791	Procavia_capensis
MGP_SPRETEiJ_G0020407	Zc3h13	67	88.136	ENSPVAG00000012353	ZC3H13	69	87.407	Pteropus_vampyrus
MGP_SPRETEiJ_G0020407	Zc3h13	50	94.246	ENSRNOG00000011237	Zc3h13	50	94.246	Rattus_norvegicus
MGP_SPRETEiJ_G0020407	Zc3h13	51	80.023	ENSRBIG00000010463	ZC3H13	53	80.181	Rhinopithecus_bieti
MGP_SPRETEiJ_G0020407	Zc3h13	51	79.932	ENSSBOG00000027228	ZC3H13	53	79.977	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0020407	Zc3h13	51	81.056	ENSSSCG00000009414	ZC3H13	52	81.336	Sus_scrofa
MGP_SPRETEiJ_G0020407	Zc3h13	80	81.503	ENSTTRG00000003611	ZC3H13	84	81.221	Tursiops_truncatus
MGP_SPRETEiJ_G0020407	Zc3h13	51	79.886	ENSUMAG00000016220	ZC3H13	52	79.702	Ursus_maritimus
MGP_SPRETEiJ_G0020407	Zc3h13	84	90.000	ENSVPAG00000005179	ZC3H13	53	91.150	Vicugna_pacos
MGP_SPRETEiJ_G0020407	Zc3h13	51	52.466	ENSXETG00000014637	zc3h13	79	58.204	Xenopus_tropicalis