EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0020515 (Gene tree)
Gene ID: -
Gene Symbol: Pcca
Alias: C79630
Full Name: propionyl-Coenzyme A carboxylase%2C alpha polypeptide
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 375690 bases
Position: chr14:115278280-115653969
Accession: 97499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0039434	RimK	PF08443.11	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0039445	-	564	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0039444	-	1886	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0039441	-	604	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0039440	-	287	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0039442	-	514	-	MGP_SPRETEiJ_P0039442	85 (aa)	-	-
MGP_SPRETEiJ_T0039438	-	322	-	MGP_SPRETEiJ_P0039438	34 (aa)	-	-
MGP_SPRETEiJ_T0039439	-	1268	-	MGP_SPRETEiJ_P0039439	166 (aa)	-	UPI00024677C8
MGP_SPRETEiJ_T0039432	-	692	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0039433	-	431	-	MGP_SPRETEiJ_P0039433	131 (aa)	-	-
MGP_SPRETEiJ_T0039434	-	2592	-	MGP_SPRETEiJ_P0039434	724 (aa)	-	-
MGP_SPRETEiJ_T0039435	-	512	-	MGP_SPRETEiJ_P0039435	163 (aa)	-	-
MGP_SPRETEiJ_T0039436	-	967	-	MGP_SPRETEiJ_P0039436	182 (aa)	-	-
MGP_SPRETEiJ_T0039437	-	534	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0020515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0020515's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0020515	Pcca	92	40.228	MGP_SPRETEiJ_G0025866	Mccc1	93	40.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0020515	Pcca	100	89.011	ENSG00000175198	PCCA	99	93.651	Homo_sapiens
MGP_SPRETEiJ_G0020515	Pcca	89	76.242	ENSAPOG00000002389	pcca	100	76.242	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0020515	Pcca	87	91.772	ENSAMEG00000016627	PCCA	99	91.772	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0020515	Pcca	85	80.392	ENSACIG00000015913	PCCA	98	80.392	Amphilophus_citrinellus
MGP_SPRETEiJ_G0020515	Pcca	97	75.429	ENSAOCG00000005451	pcca	98	75.429	Amphiprion_ocellaris
MGP_SPRETEiJ_G0020515	Pcca	97	75.680	ENSAPEG00000002955	pcca	98	75.680	Amphiprion_percula
MGP_SPRETEiJ_G0020515	Pcca	98	74.294	ENSATEG00000004273	pcca	99	74.294	Anabas_testudineus
MGP_SPRETEiJ_G0020515	Pcca	94	84.694	ENSAPLG00000002609	PCCA	99	84.694	Anas_platyrhynchos
MGP_SPRETEiJ_G0020515	Pcca	100	84.225	ENSANAG00000031162	PCCA	94	91.905	Aotus_nancymaae
MGP_SPRETEiJ_G0020515	Pcca	98	75.282	ENSACLG00000006725	pcca	98	75.282	Astatotilapia_calliptera
MGP_SPRETEiJ_G0020515	Pcca	100	86.235	ENSBTAG00000010672	PCCA	100	86.235	Bos_taurus
MGP_SPRETEiJ_G0020515	Pcca	100	88.187	ENSCJAG00000020998	PCCA	100	88.187	Callithrix_jacchus
MGP_SPRETEiJ_G0020515	Pcca	100	88.509	ENSCAFG00000005838	PCCA	100	88.509	Canis_familiaris
MGP_SPRETEiJ_G0020515	Pcca	100	88.509	ENSCAFG00020022683	PCCA	100	88.509	Canis_lupus_dingo
MGP_SPRETEiJ_G0020515	Pcca	100	87.123	ENSCHIG00000007335	PCCA	100	87.123	Capra_hircus
MGP_SPRETEiJ_G0020515	Pcca	96	90.909	ENSTSYG00000000053	PCCA	95	92.204	Carlito_syrichta
MGP_SPRETEiJ_G0020515	Pcca	100	89.148	ENSCPOG00000011274	PCCA	100	89.148	Cavia_porcellus
MGP_SPRETEiJ_G0020515	Pcca	100	88.736	ENSCCAG00000022253	PCCA	100	88.736	Cebus_capucinus
MGP_SPRETEiJ_G0020515	Pcca	100	89.011	ENSCATG00000034177	PCCA	100	89.011	Cercocebus_atys
MGP_SPRETEiJ_G0020515	Pcca	100	91.346	ENSCLAG00000003205	PCCA	100	91.346	Chinchilla_lanigera
MGP_SPRETEiJ_G0020515	Pcca	100	89.286	ENSCSAG00000017493	PCCA	100	89.286	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0020515	Pcca	86	84.630	ENSCHOG00000000247	PCCA	90	84.630	Choloepus_hoffmanni
MGP_SPRETEiJ_G0020515	Pcca	98	81.895	ENSCPBG00000018046	PCCA	98	82.353	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0020515	Pcca	92	65.230	ENSCING00000008081	-	95	65.230	Ciona_intestinalis
MGP_SPRETEiJ_G0020515	Pcca	93	62.555	ENSCSAVG00000011361	-	99	63.338	Ciona_savignyi
MGP_SPRETEiJ_G0020515	Pcca	100	88.599	ENSCANG00000013062	PCCA	100	88.599	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0020515	Pcca	100	92.265	ENSCGRG00001015819	Pcca	100	92.265	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0020515	Pcca	97	92.624	ENSCGRG00000014796	Pcca	100	90.884	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0020515	Pcca	97	73.826	ENSCSEG00000016645	pcca	99	73.826	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0020515	Pcca	86	77.404	ENSCVAG00000010430	pcca	95	84.282	Cyprinodon_variegatus
MGP_SPRETEiJ_G0020515	Pcca	100	87.775	ENSDNOG00000042384	PCCA	100	90.683	Dasypus_novemcinctus
MGP_SPRETEiJ_G0020515	Pcca	100	76.639	ENSDORG00000012949	Pcca	100	76.639	Dipodomys_ordii
MGP_SPRETEiJ_G0020515	Pcca	98	90.603	ENSEASG00005022166	PCCA	100	89.726	Equus_asinus_asinus
MGP_SPRETEiJ_G0020515	Pcca	98	90.603	ENSECAG00000018952	PCCA	100	89.589	Equus_caballus
MGP_SPRETEiJ_G0020515	Pcca	91	76.515	ENSELUG00000002383	pcca	100	76.515	Esox_lucius
MGP_SPRETEiJ_G0020515	Pcca	100	89.589	ENSFCAG00000012573	PCCA	100	89.589	Felis_catus
MGP_SPRETEiJ_G0020515	Pcca	100	89.423	ENSFDAG00000005817	PCCA	97	89.423	Fukomys_damarensis
MGP_SPRETEiJ_G0020515	Pcca	97	75.571	ENSFHEG00000011811	pcca	98	75.571	Fundulus_heteroclitus
MGP_SPRETEiJ_G0020515	Pcca	97	75.286	ENSGAFG00000011218	pcca	98	75.286	Gambusia_affinis
MGP_SPRETEiJ_G0020515	Pcca	90	77.077	ENSGACG00000002342	pcca	100	77.077	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0020515	Pcca	87	83.968	ENSGAGG00000010472	PCCA	95	83.968	Gopherus_agassizii
MGP_SPRETEiJ_G0020515	Pcca	100	89.423	ENSGGOG00000012516	PCCA	100	89.423	Gorilla_gorilla
MGP_SPRETEiJ_G0020515	Pcca	100	89.286	ENSHGLG00000011057	PCCA	100	89.286	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0020515	Pcca	100	89.286	ENSHGLG00100001468	PCCA	100	89.286	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0020515	Pcca	97	74.535	ENSHCOG00000016098	pcca	100	75.466	Hippocampus_comes
MGP_SPRETEiJ_G0020515	Pcca	96	92.352	ENSSTOG00000021045	PCCA	100	92.352	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0020515	Pcca	100	88.950	ENSJJAG00000011150	Pcca	100	88.950	Jaculus_jaculus
MGP_SPRETEiJ_G0020515	Pcca	96	76.259	ENSKMAG00000014632	pcca	98	76.259	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0020515	Pcca	89	83.851	ENSLACG00000012828	PCCA	100	83.851	Latimeria_chalumnae
MGP_SPRETEiJ_G0020515	Pcca	92	89.371	ENSLAFG00000014958	PCCA	100	89.371	Loxodonta_africana
MGP_SPRETEiJ_G0020515	Pcca	100	89.148	ENSMFAG00000020427	PCCA	100	89.148	Macaca_fascicularis
MGP_SPRETEiJ_G0020515	Pcca	100	89.148	ENSMMUG00000004493	PCCA	100	89.148	Macaca_mulatta
MGP_SPRETEiJ_G0020515	Pcca	100	89.011	ENSMNEG00000045261	PCCA	100	89.011	Macaca_nemestrina
MGP_SPRETEiJ_G0020515	Pcca	100	89.011	ENSMLEG00000033842	PCCA	100	89.011	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0020515	Pcca	97	74.822	ENSMAMG00000009304	pcca	99	74.822	Mastacembelus_armatus
MGP_SPRETEiJ_G0020515	Pcca	98	75.282	ENSMZEG00005018487	pcca	98	75.282	Maylandia_zebra
MGP_SPRETEiJ_G0020515	Pcca	57	89.713	ENSMGAG00000014892	PCCA	99	89.713	Meleagris_gallopavo
MGP_SPRETEiJ_G0020515	Pcca	100	85.912	ENSMAUG00000000626	Pcca	100	85.912	Mesocricetus_auratus
MGP_SPRETEiJ_G0020515	Pcca	100	89.423	ENSMICG00000010685	-	100	89.423	Microcebus_murinus
MGP_SPRETEiJ_G0020515	Pcca	68	87.169	ENSMICG00000038258	-	97	84.808	Microcebus_murinus
MGP_SPRETEiJ_G0020515	Pcca	100	91.298	ENSMOCG00000015156	Pcca	100	91.298	Microtus_ochrogaster
MGP_SPRETEiJ_G0020515	Pcca	96	74.713	ENSMALG00000009947	pcca	100	74.848	Monopterus_albus
MGP_SPRETEiJ_G0020515	Pcca	100	99.586	MGP_CAROLIEiJ_G0019618	Pcca	100	99.586	Mus_caroli
MGP_SPRETEiJ_G0020515	Pcca	100	99.862	ENSMUSG00000041650	Pcca	100	99.862	Mus_musculus
MGP_SPRETEiJ_G0020515	Pcca	100	98.619	MGP_PahariEiJ_G0030634	Pcca	100	98.619	Mus_pahari
MGP_SPRETEiJ_G0020515	Pcca	94	91.825	ENSMPUG00000011333	PCCA	100	91.825	Mustela_putorius_furo
MGP_SPRETEiJ_G0020515	Pcca	80	87.372	ENSMLUG00000005729	PCCA	99	87.372	Myotis_lucifugus
MGP_SPRETEiJ_G0020515	Pcca	100	86.657	ENSNGAG00000016528	Pcca	100	86.933	Nannospalax_galili
MGP_SPRETEiJ_G0020515	Pcca	68	74.286	ENSNBRG00000019075	pcca	87	74.286	Neolamprologus_brichardi
MGP_SPRETEiJ_G0020515	Pcca	99	89.540	ENSODEG00000010667	PCCA	96	89.540	Octodon_degus
MGP_SPRETEiJ_G0020515	Pcca	98	75.424	ENSONIG00000013151	pcca	98	75.424	Oreochromis_niloticus
MGP_SPRETEiJ_G0020515	Pcca	90	89.787	ENSOCUG00000017230	PCCA	96	89.787	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0020515	Pcca	97	73.257	ENSORLG00000000361	pcca	98	73.257	Oryzias_latipes
MGP_SPRETEiJ_G0020515	Pcca	97	73.542	ENSORLG00020005749	pcca	98	73.542	Oryzias_latipes_hni
MGP_SPRETEiJ_G0020515	Pcca	97	73.617	ENSORLG00015012738	pcca	98	73.617	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0020515	Pcca	97	73.932	ENSOMEG00000001912	pcca	98	73.932	Oryzias_melastigma
MGP_SPRETEiJ_G0020515	Pcca	100	88.049	ENSOGAG00000017088	PCCA	100	88.049	Otolemur_garnettii
MGP_SPRETEiJ_G0020515	Pcca	89	90.867	ENSOARG00000004442	PCCA	100	90.867	Ovis_aries
MGP_SPRETEiJ_G0020515	Pcca	100	89.148	ENSPPAG00000036841	PCCA	100	89.148	Pan_paniscus
MGP_SPRETEiJ_G0020515	Pcca	100	89.589	ENSPPRG00000006626	PCCA	100	89.589	Panthera_pardus
MGP_SPRETEiJ_G0020515	Pcca	87	92.698	ENSPTIG00000009732	PCCA	100	92.698	Panthera_tigris_altaica
MGP_SPRETEiJ_G0020515	Pcca	100	89.286	ENSPTRG00000006001	PCCA	100	89.286	Pan_troglodytes
MGP_SPRETEiJ_G0020515	Pcca	97	78.602	ENSPKIG00000004765	pcca	99	78.602	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0020515	Pcca	89	83.230	ENSPSIG00000009154	PCCA	100	83.230	Pelodiscus_sinensis
MGP_SPRETEiJ_G0020515	Pcca	100	92.541	ENSPEMG00000009083	Pcca	100	92.541	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0020515	Pcca	100	79.258	ENSPCIG00000027261	PCCA	100	79.533	Phascolarctos_cinereus
MGP_SPRETEiJ_G0020515	Pcca	97	75.000	ENSPFOG00000014855	pcca	98	75.000	Poecilia_formosa
MGP_SPRETEiJ_G0020515	Pcca	97	75.000	ENSPLAG00000016583	pcca	98	75.000	Poecilia_latipinna
MGP_SPRETEiJ_G0020515	Pcca	97	74.857	ENSPMEG00000011613	pcca	98	74.857	Poecilia_mexicana
MGP_SPRETEiJ_G0020515	Pcca	91	76.408	ENSPREG00000007537	pcca	100	76.408	Poecilia_reticulata
MGP_SPRETEiJ_G0020515	Pcca	100	88.736	ENSPPYG00000005473	PCCA	100	88.736	Pongo_abelii
MGP_SPRETEiJ_G0020515	Pcca	100	87.707	ENSPCOG00000015321	PCCA	100	87.707	Propithecus_coquereli
MGP_SPRETEiJ_G0020515	Pcca	91	76.133	ENSPNYG00000008226	pcca	100	76.133	Pundamilia_nyererei
MGP_SPRETEiJ_G0020515	Pcca	97	76.605	ENSPNAG00000011078	pcca	99	76.605	Pygocentrus_nattereri
MGP_SPRETEiJ_G0020515	Pcca	100	88.874	ENSRROG00000030936	PCCA	100	88.874	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0020515	Pcca	100	89.286	ENSSBOG00000020005	PCCA	100	89.286	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0020515	Pcca	97	78.887	ENSSFOG00015021986	pcca	99	78.887	Scleropages_formosus
MGP_SPRETEiJ_G0020515	Pcca	89	77.019	ENSSMAG00000018126	pcca	100	77.019	Scophthalmus_maximus
MGP_SPRETEiJ_G0020515	Pcca	98	75.847	ENSSDUG00000021326	pcca	99	75.847	Seriola_dumerili
MGP_SPRETEiJ_G0020515	Pcca	98	75.847	ENSSLDG00000016568	pcca	99	75.847	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0020515	Pcca	87	82.484	ENSSPUG00000006036	PCCA	96	82.166	Sphenodon_punctatus
MGP_SPRETEiJ_G0020515	Pcca	94	72.647	ENSSPAG00000022191	pcca	93	72.647	Stegastes_partitus
MGP_SPRETEiJ_G0020515	Pcca	100	87.945	ENSSSCG00000009522	PCCA	100	87.945	Sus_scrofa
MGP_SPRETEiJ_G0020515	Pcca	95	81.014	ENSTGUG00000010915	PCCA	100	81.014	Taeniopygia_guttata
MGP_SPRETEiJ_G0020515	Pcca	98	74.718	ENSTRUG00000004990	pcca	99	74.718	Takifugu_rubripes
MGP_SPRETEiJ_G0020515	Pcca	100	86.475	ENSTTRG00000002569	PCCA	100	86.475	Tursiops_truncatus
MGP_SPRETEiJ_G0020515	Pcca	97	87.447	ENSUMAG00000023453	PCCA	100	92.260	Ursus_maritimus
MGP_SPRETEiJ_G0020515	Pcca	100	88.372	ENSVVUG00000013550	PCCA	100	91.108	Vulpes_vulpes
MGP_SPRETEiJ_G0020515	Pcca	91	77.017	ENSXCOG00000014159	pcca	100	77.017	Xiphophorus_couchianus
MGP_SPRETEiJ_G0020515	Pcca	97	75.429	ENSXMAG00000014869	pcca	98	75.429	Xiphophorus_maculatus