EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0020574 (Gene tree)
Gene ID: -
Gene Symbol: Zfr
Alias: C920030H05Rik
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 78142 bases
Position: chr15:9223503-9301644
Accession: 1341890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0039661	DZF	PF07528.14	1.2e-69	1	1
MGP_SPRETEiJ_P0039666	DZF	PF07528.14	6.6e-66	1	1
MGP_SPRETEiJ_P0039661	zf-met	PF12874.7	3.5e-21	1	3
MGP_SPRETEiJ_P0039661	zf-met	PF12874.7	3.5e-21	2	3
MGP_SPRETEiJ_P0039661	zf-met	PF12874.7	3.5e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0039669	-	860	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0039668	-	667	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0039661	-	4841	-	MGP_SPRETEiJ_P0039661	1074 (aa)	-	-
MGP_SPRETEiJ_T0039663	-	633	-	MGP_SPRETEiJ_P0039663	193 (aa)	-	UPI0001889C7C
MGP_SPRETEiJ_T0039662	-	812	-	MGP_SPRETEiJ_P0039662	247 (aa)	-	UPI0001889C7B
MGP_SPRETEiJ_T0039665	-	565	-	MGP_SPRETEiJ_P0039665	114 (aa)	-	-
MGP_SPRETEiJ_T0039664	-	512	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0039667	-	932	-	MGP_SPRETEiJ_P0039667	43 (aa)	-	-
MGP_SPRETEiJ_T0039666	-	897	-	MGP_SPRETEiJ_P0039666	298 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0020574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0020574's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0020574	Zfr	100	53.443	MGP_SPRETEiJ_G0024440	-	97	46.825
MGP_SPRETEiJ_G0020574	Zfr	100	55.853	MGP_SPRETEiJ_G0016445	Zfr2	91	51.534

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0020574	Zfr	100	97.579	ENSG00000056097	ZFR	100	97.579	Homo_sapiens
MGP_SPRETEiJ_G0020574	Zfr	100	78.523	ENSAPOG00000009740	zfr	100	72.350	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0020574	Zfr	100	98.045	ENSAMEG00000006184	ZFR	100	98.045	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0020574	Zfr	100	79.530	ENSACIG00000015926	zfr	100	74.854	Amphilophus_citrinellus
MGP_SPRETEiJ_G0020574	Zfr	100	73.655	ENSAOCG00000013876	zfr	100	74.656	Amphiprion_ocellaris
MGP_SPRETEiJ_G0020574	Zfr	100	79.530	ENSAPEG00000024383	zfr	100	77.319	Amphiprion_percula
MGP_SPRETEiJ_G0020574	Zfr	100	79.195	ENSATEG00000010271	zfr	100	77.156	Anabas_testudineus
MGP_SPRETEiJ_G0020574	Zfr	78	85.150	ENSAPLG00000015627	-	100	85.389	Anas_platyrhynchos
MGP_SPRETEiJ_G0020574	Zfr	100	91.275	ENSACAG00000007880	ZFR	100	87.662	Anolis_carolinensis
MGP_SPRETEiJ_G0020574	Zfr	100	97.858	ENSANAG00000023333	ZFR	100	97.858	Aotus_nancymaae
MGP_SPRETEiJ_G0020574	Zfr	100	79.195	ENSACLG00000016832	zfr	100	75.058	Astatotilapia_calliptera
MGP_SPRETEiJ_G0020574	Zfr	100	78.859	ENSAMXG00000019511	zfr	100	79.346	Astyanax_mexicanus
MGP_SPRETEiJ_G0020574	Zfr	100	98.231	ENSBTAG00000008414	ZFR	100	98.231	Bos_taurus
MGP_SPRETEiJ_G0020574	Zfr	100	97.952	ENSCJAG00000018740	ZFR	100	97.952	Callithrix_jacchus
MGP_SPRETEiJ_G0020574	Zfr	100	95.543	ENSCAFG00000018886	ZFR	100	97.963	Canis_familiaris
MGP_SPRETEiJ_G0020574	Zfr	100	98.045	ENSCAFG00020016859	-	100	98.045	Canis_lupus_dingo
MGP_SPRETEiJ_G0020574	Zfr	100	98.045	ENSCHIG00000007710	ZFR	100	98.045	Capra_hircus
MGP_SPRETEiJ_G0020574	Zfr	100	97.315	ENSTSYG00000010670	ZFR	99	96.743	Carlito_syrichta
MGP_SPRETEiJ_G0020574	Zfr	100	85.906	ENSCAPG00000015655	ZFR	100	74.660	Cavia_aperea
MGP_SPRETEiJ_G0020574	Zfr	100	97.315	ENSCPOG00000000862	ZFR	100	91.440	Cavia_porcellus
MGP_SPRETEiJ_G0020574	Zfr	100	97.765	ENSCCAG00000024473	ZFR	100	97.765	Cebus_capucinus
MGP_SPRETEiJ_G0020574	Zfr	100	97.765	ENSCATG00000038311	ZFR	100	97.765	Cercocebus_atys
MGP_SPRETEiJ_G0020574	Zfr	100	97.315	ENSCLAG00000007408	ZFR	100	97.374	Chinchilla_lanigera
MGP_SPRETEiJ_G0020574	Zfr	100	97.579	ENSCSAG00000017180	ZFR	100	97.579	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0020574	Zfr	100	78.523	ENSCHOG00000003848	ZFR	100	77.735	Choloepus_hoffmanni
MGP_SPRETEiJ_G0020574	Zfr	100	91.946	ENSCPBG00000024211	ZFR	100	91.558	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0020574	Zfr	100	97.579	ENSCANG00000017807	ZFR	100	97.579	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0020574	Zfr	100	98.696	ENSCGRG00001016009	Zfr	100	98.696	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0020574	Zfr	100	97.315	ENSCGRG00000001228	Zfr	99	96.588	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0020574	Zfr	100	79.195	ENSCSEG00000009224	zfr	100	74.473	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0020574	Zfr	100	77.517	ENSCSEG00000011169	ZFR	99	75.207	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0020574	Zfr	100	78.188	ENSCVAG00000016494	zfr	100	73.754	Cyprinodon_variegatus
MGP_SPRETEiJ_G0020574	Zfr	100	77.901	ENSDARG00000027109	zfr	100	78.396	Danio_rerio
MGP_SPRETEiJ_G0020574	Zfr	100	97.651	ENSDNOG00000008852	ZFR	100	97.026	Dasypus_novemcinctus
MGP_SPRETEiJ_G0020574	Zfr	100	98.045	ENSDORG00000016643	Zfr	100	98.045	Dipodomys_ordii
MGP_SPRETEiJ_G0020574	Zfr	100	96.309	ENSETEG00000008937	ZFR	100	91.713	Echinops_telfairi
MGP_SPRETEiJ_G0020574	Zfr	100	62.081	ENSEBUG00000012503	-	99	57.093	Eptatretus_burgeri
MGP_SPRETEiJ_G0020574	Zfr	100	97.765	ENSEASG00005007104	ZFR	100	97.765	Equus_asinus_asinus
MGP_SPRETEiJ_G0020574	Zfr	82	97.614	ENSECAG00000012851	ZFR	99	97.614	Equus_caballus
MGP_SPRETEiJ_G0020574	Zfr	95	84.828	ENSEEUG00000014206	ZFR	94	84.828	Erinaceus_europaeus
MGP_SPRETEiJ_G0020574	Zfr	100	73.355	ENSELUG00000022743	zfr	99	68.681	Esox_lucius
MGP_SPRETEiJ_G0020574	Zfr	100	98.138	ENSFCAG00000000354	ZFR	100	98.138	Felis_catus
MGP_SPRETEiJ_G0020574	Zfr	100	92.953	ENSFALG00000002149	ZFR	100	89.944	Ficedula_albicollis
MGP_SPRETEiJ_G0020574	Zfr	100	96.980	ENSFDAG00000012993	ZFR	100	96.890	Fukomys_damarensis
MGP_SPRETEiJ_G0020574	Zfr	100	76.174	ENSFHEG00000012064	zfr	100	69.207	Fundulus_heteroclitus
MGP_SPRETEiJ_G0020574	Zfr	94	83.750	ENSGMOG00000003967	zfr	94	82.432	Gadus_morhua
MGP_SPRETEiJ_G0020574	Zfr	100	90.940	ENSGALG00000034488	-	100	89.944	Gallus_gallus
MGP_SPRETEiJ_G0020574	Zfr	100	92.282	ENSGALG00000003235	-	100	91.899	Gallus_gallus
MGP_SPRETEiJ_G0020574	Zfr	99	62.048	ENSGAFG00000016229	zfr	100	60.570	Gambusia_affinis
MGP_SPRETEiJ_G0020574	Zfr	100	77.181	ENSGACG00000005045	zfr	100	73.001	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0020574	Zfr	96	91.986	ENSGAGG00000013544	ZFR	99	90.882	Gopherus_agassizii
MGP_SPRETEiJ_G0020574	Zfr	100	97.579	ENSGGOG00000016302	ZFR	100	97.579	Gorilla_gorilla
MGP_SPRETEiJ_G0020574	Zfr	100	97.393	ENSHGLG00000008088	ZFR	100	97.393	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0020574	Zfr	100	97.315	ENSHGLG00100016776	ZFR	99	97.276	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0020574	Zfr	100	76.254	ENSHCOG00000001548	zfr	100	75.641	Hippocampus_comes
MGP_SPRETEiJ_G0020574	Zfr	100	79.866	ENSIPUG00000008192	zfr	100	79.689	Ictalurus_punctatus
MGP_SPRETEiJ_G0020574	Zfr	100	97.651	ENSSTOG00000008742	ZFR	100	97.020	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0020574	Zfr	100	97.315	ENSJJAG00000023064	Zfr	98	92.060	Jaculus_jaculus
MGP_SPRETEiJ_G0020574	Zfr	92	75.451	ENSKMAG00000009468	zfr	99	76.353	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0020574	Zfr	100	77.303	ENSLBEG00000010783	zfr	100	76.471	Labrus_bergylta
MGP_SPRETEiJ_G0020574	Zfr	100	77.798	ENSLACG00000000831	ZFR	100	79.463	Latimeria_chalumnae
MGP_SPRETEiJ_G0020574	Zfr	100	81.208	ENSLOCG00000006727	zfr	100	79.982	Lepisosteus_oculatus
MGP_SPRETEiJ_G0020574	Zfr	100	97.315	ENSLAFG00000002308	ZFR	100	97.053	Loxodonta_africana
MGP_SPRETEiJ_G0020574	Zfr	100	97.315	ENSMFAG00000042691	ZFR	100	96.834	Macaca_fascicularis
MGP_SPRETEiJ_G0020574	Zfr	100	97.765	ENSMMUG00000001317	ZFR	100	97.765	Macaca_mulatta
MGP_SPRETEiJ_G0020574	Zfr	100	97.765	ENSMNEG00000029441	ZFR	100	97.765	Macaca_nemestrina
MGP_SPRETEiJ_G0020574	Zfr	100	97.315	ENSMLEG00000028503	ZFR	100	97.575	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0020574	Zfr	100	77.517	ENSMAMG00000017351	zfr	100	76.260	Mastacembelus_armatus
MGP_SPRETEiJ_G0020574	Zfr	100	79.195	ENSMZEG00005021243	zfr	100	75.058	Maylandia_zebra
MGP_SPRETEiJ_G0020574	Zfr	100	74.667	ENSMGAG00000002841	ZFR	99	77.638	Meleagris_gallopavo
MGP_SPRETEiJ_G0020574	Zfr	100	97.952	ENSMAUG00000000976	Zfr	100	97.952	Mesocricetus_auratus
MGP_SPRETEiJ_G0020574	Zfr	100	97.858	ENSMICG00000001244	ZFR	100	97.858	Microcebus_murinus
MGP_SPRETEiJ_G0020574	Zfr	100	98.510	ENSMOCG00000018630	Zfr	100	98.510	Microtus_ochrogaster
MGP_SPRETEiJ_G0020574	Zfr	100	80.201	ENSMMOG00000012585	zfr	90	76.085	Mola_mola
MGP_SPRETEiJ_G0020574	Zfr	100	94.966	ENSMODG00000020412	ZFR	100	94.320	Monodelphis_domestica
MGP_SPRETEiJ_G0020574	Zfr	100	78.523	ENSMALG00000007123	zfr	94	84.932	Monopterus_albus
MGP_SPRETEiJ_G0020574	Zfr	100	99.664	MGP_CAROLIEiJ_G0019681	Zfr	100	99.664	Mus_caroli
MGP_SPRETEiJ_G0020574	Zfr	100	99.664	ENSMUSG00000022201	Zfr	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0020574	Zfr	100	99.348	MGP_PahariEiJ_G0016057	Zfr	100	99.348	Mus_pahari
MGP_SPRETEiJ_G0020574	Zfr	73	97.332	ENSMPUG00000015193	-	99	97.332	Mustela_putorius_furo
MGP_SPRETEiJ_G0020574	Zfr	52	100.000	ENSMPUG00000015194	-	84	100.000	Mustela_putorius_furo
MGP_SPRETEiJ_G0020574	Zfr	100	97.315	ENSMLUG00000011797	ZFR	100	96.812	Myotis_lucifugus
MGP_SPRETEiJ_G0020574	Zfr	100	98.324	ENSNGAG00000018328	Zfr	100	98.324	Nannospalax_galili
MGP_SPRETEiJ_G0020574	Zfr	94	84.656	ENSNBRG00000008378	zfr	100	73.617	Neolamprologus_brichardi
MGP_SPRETEiJ_G0020574	Zfr	100	97.315	ENSNLEG00000014098	ZFR	100	97.478	Nomascus_leucogenys
MGP_SPRETEiJ_G0020574	Zfr	100	83.893	ENSMEUG00000010225	ZFR	100	87.840	Notamacropus_eugenii
MGP_SPRETEiJ_G0020574	Zfr	83	99.200	ENSOPRG00000016756	ZFR	84	99.200	Ochotona_princeps
MGP_SPRETEiJ_G0020574	Zfr	100	97.315	ENSODEG00000001990	ZFR	100	97.374	Octodon_degus
MGP_SPRETEiJ_G0020574	Zfr	100	94.966	ENSOANG00000014434	ZFR	99	93.495	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0020574	Zfr	100	97.651	ENSOCUG00000016737	ZFR	100	97.393	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0020574	Zfr	100	77.517	ENSORLG00000017243	zfr	99	75.298	Oryzias_latipes
MGP_SPRETEiJ_G0020574	Zfr	100	77.517	ENSORLG00020014823	zfr	99	75.207	Oryzias_latipes_hni
MGP_SPRETEiJ_G0020574	Zfr	100	77.517	ENSORLG00015005801	zfr	99	75.207	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0020574	Zfr	100	77.852	ENSOMEG00000003336	zfr	99	76.287	Oryzias_melastigma
MGP_SPRETEiJ_G0020574	Zfr	100	95.349	ENSOGAG00000015117	ZFR	100	95.349	Otolemur_garnettii
MGP_SPRETEiJ_G0020574	Zfr	100	97.987	ENSOARG00000012233	ZFR	100	97.284	Ovis_aries
MGP_SPRETEiJ_G0020574	Zfr	100	96.980	ENSPPAG00000027447	ZFR	99	97.282	Pan_paniscus
MGP_SPRETEiJ_G0020574	Zfr	100	98.045	ENSPPRG00000008253	ZFR	100	98.045	Panthera_pardus
MGP_SPRETEiJ_G0020574	Zfr	100	97.315	ENSPTIG00000010038	ZFR	99	95.051	Panthera_tigris_altaica
MGP_SPRETEiJ_G0020574	Zfr	100	97.672	ENSPTRG00000016771	ZFR	100	97.672	Pan_troglodytes
MGP_SPRETEiJ_G0020574	Zfr	100	97.315	ENSPANG00000003729	ZFR	100	95.624	Papio_anubis
MGP_SPRETEiJ_G0020574	Zfr	100	75.839	ENSPKIG00000007596	ZFR	100	69.534	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0020574	Zfr	100	80.537	ENSPKIG00000016781	ZFR	100	78.821	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0020574	Zfr	100	92.282	ENSPSIG00000005779	ZFR	100	93.153	Pelodiscus_sinensis
MGP_SPRETEiJ_G0020574	Zfr	100	74.497	ENSPMGG00000015984	zfr	100	70.741	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0020574	Zfr	96	97.213	ENSPEMG00000014573	Zfr	98	97.198	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0020574	Zfr	100	94.631	ENSPCIG00000020906	ZFR	100	94.134	Phascolarctos_cinereus
MGP_SPRETEiJ_G0020574	Zfr	100	77.852	ENSPFOG00000005931	zfr	100	75.666	Poecilia_formosa
MGP_SPRETEiJ_G0020574	Zfr	100	77.517	ENSPREG00000011947	zfr	100	75.967	Poecilia_reticulata
MGP_SPRETEiJ_G0020574	Zfr	100	96.644	ENSPPYG00000015378	ZFR	99	97.187	Pongo_abelii
MGP_SPRETEiJ_G0020574	Zfr	100	88.920	ENSPCAG00000007277	ZFR	100	88.920	Procavia_capensis
MGP_SPRETEiJ_G0020574	Zfr	96	97.561	ENSPCOG00000000045	ZFR	99	97.549	Propithecus_coquereli
MGP_SPRETEiJ_G0020574	Zfr	94	97.576	ENSPVAG00000004780	ZFR	94	97.576	Pteropus_vampyrus
MGP_SPRETEiJ_G0020574	Zfr	100	79.195	ENSPNYG00000006239	zfr	100	75.058	Pundamilia_nyererei
MGP_SPRETEiJ_G0020574	Zfr	100	80.201	ENSPNAG00000025151	zfr	100	80.952	Pygocentrus_nattereri
MGP_SPRETEiJ_G0020574	Zfr	100	99.069	ENSRNOG00000011627	Zfr	100	100.000	Rattus_norvegicus
MGP_SPRETEiJ_G0020574	Zfr	100	97.672	ENSRBIG00000041561	ZFR	100	97.672	Rhinopithecus_bieti
MGP_SPRETEiJ_G0020574	Zfr	100	97.672	ENSRROG00000044008	ZFR	100	97.672	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0020574	Zfr	100	96.980	ENSSBOG00000024150	ZFR	99	97.374	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0020574	Zfr	100	94.966	ENSSHAG00000015478	ZFR	100	93.883	Sarcophilus_harrisii
MGP_SPRETEiJ_G0020574	Zfr	100	78.523	ENSSFOG00015017300	ZFR	100	73.559	Scleropages_formosus
MGP_SPRETEiJ_G0020574	Zfr	100	77.409	ENSSMAG00000000320	zfr	100	76.294	Scophthalmus_maximus
MGP_SPRETEiJ_G0020574	Zfr	100	79.195	ENSSDUG00000013882	zfr	100	77.227	Seriola_dumerili
MGP_SPRETEiJ_G0020574	Zfr	100	79.530	ENSSLDG00000000762	zfr	100	70.340	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0020574	Zfr	89	99.099	ENSSARG00000006571	ZFR	93	99.099	Sorex_araneus
MGP_SPRETEiJ_G0020574	Zfr	100	90.268	ENSSPUG00000016786	ZFR	100	90.087	Sphenodon_punctatus
MGP_SPRETEiJ_G0020574	Zfr	100	78.859	ENSSPAG00000019293	zfr	100	77.015	Stegastes_partitus
MGP_SPRETEiJ_G0020574	Zfr	100	97.672	ENSSSCG00000027681	ZFR	100	97.672	Sus_scrofa
MGP_SPRETEiJ_G0020574	Zfr	100	92.333	ENSTGUG00000001909	ZFR	100	91.174	Taeniopygia_guttata
MGP_SPRETEiJ_G0020574	Zfr	100	79.195	ENSTRUG00000016620	zfr	100	77.156	Takifugu_rubripes
MGP_SPRETEiJ_G0020574	Zfr	100	76.510	ENSTNIG00000018856	zfr	98	72.391	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0020574	Zfr	100	77.281	ENSTBEG00000017687	ZFR	100	77.095	Tupaia_belangeri
MGP_SPRETEiJ_G0020574	Zfr	100	97.651	ENSTTRG00000017321	ZFR	100	92.924	Tursiops_truncatus
MGP_SPRETEiJ_G0020574	Zfr	78	97.491	ENSUAMG00000000172	-	99	97.491	Ursus_americanus
MGP_SPRETEiJ_G0020574	Zfr	78	97.491	ENSUMAG00000013805	-	99	97.491	Ursus_maritimus
MGP_SPRETEiJ_G0020574	Zfr	100	98.322	ENSVPAG00000011011	ZFR	100	94.879	Vicugna_pacos
MGP_SPRETEiJ_G0020574	Zfr	100	98.138	ENSVVUG00000022171	-	100	98.138	Vulpes_vulpes
MGP_SPRETEiJ_G0020574	Zfr	100	86.577	ENSXETG00000015598	zfr	100	79.833	Xenopus_tropicalis
MGP_SPRETEiJ_G0020574	Zfr	100	77.852	ENSXCOG00000009361	zfr	100	74.564	Xiphophorus_couchianus
MGP_SPRETEiJ_G0020574	Zfr	100	77.517	ENSXMAG00000013356	zfr	100	74.197	Xiphophorus_maculatus