EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0020622 (Gene tree)
Gene ID: -
Gene Symbol: Pop1
Alias: 4932434G09Rik
Full Name: processing of precursor 1%2C ribonuclease P/MRP family%2C (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 38624 bases
Position: chr15:32288043-32326666
Accession: 1914974
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0039814	POP1	PF06978.11	1e-38	1	2
MGP_SPRETEiJ_P0039814	POP1	PF06978.11	1e-38	2	2
MGP_SPRETEiJ_P0039813	POP1	PF06978.11	1.1e-38	1	2
MGP_SPRETEiJ_P0039813	POP1	PF06978.11	1.1e-38	2	2
MGP_SPRETEiJ_P0039814	POPLD	PF08170.12	6e-27	1	1
MGP_SPRETEiJ_P0039813	POPLD	PF08170.12	6.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0039818	-	522	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0039816	-	458	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0039817	-	782	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0039814	-	3263	-	MGP_SPRETEiJ_P0039814	1011 (aa)	-	-
MGP_SPRETEiJ_T0039815	-	395	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0039813	-	3383	-	MGP_SPRETEiJ_P0039813	1041 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0020622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0020622's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0020622	Pop1	100	76.660	ENSG00000104356	POP1	100	86.885	Homo_sapiens
MGP_SPRETEiJ_G0020622	Pop1	100	46.527	ENSAPOG00000008198	pop1	100	45.798	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0020622	Pop1	100	71.981	ENSAMEG00000000556	POP1	100	71.981	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0020622	Pop1	100	46.198	ENSACIG00000004169	POP1	100	46.102	Amphilophus_citrinellus
MGP_SPRETEiJ_G0020622	Pop1	100	45.592	ENSAOCG00000010991	pop1	100	45.472	Amphiprion_ocellaris
MGP_SPRETEiJ_G0020622	Pop1	94	44.287	ENSAPEG00000007607	pop1	99	44.668	Amphiprion_percula
MGP_SPRETEiJ_G0020622	Pop1	100	44.831	ENSATEG00000024814	POP1	100	44.906	Anabas_testudineus
MGP_SPRETEiJ_G0020622	Pop1	92	59.936	ENSAPLG00000014418	POP1	99	59.830	Anas_platyrhynchos
MGP_SPRETEiJ_G0020622	Pop1	99	54.057	ENSACAG00000016083	POP1	100	54.291	Anolis_carolinensis
MGP_SPRETEiJ_G0020622	Pop1	90	84.195	ENSANAG00000026360	POP1	100	84.195	Aotus_nancymaae
MGP_SPRETEiJ_G0020622	Pop1	100	46.914	ENSACLG00000010951	pop1	100	47.198	Astatotilapia_calliptera
MGP_SPRETEiJ_G0020622	Pop1	100	45.287	ENSAMXG00000014483	POP1	100	45.005	Astyanax_mexicanus
MGP_SPRETEiJ_G0020622	Pop1	100	72.825	ENSBTAG00000012596	POP1	100	72.825	Bos_taurus
MGP_SPRETEiJ_G0020622	Pop1	100	75.781	ENSCJAG00000015567	POP1	100	75.781	Callithrix_jacchus
MGP_SPRETEiJ_G0020622	Pop1	100	72.816	ENSCAFG00000000469	POP1	100	72.816	Canis_familiaris
MGP_SPRETEiJ_G0020622	Pop1	100	73.242	ENSCAFG00020026765	POP1	100	73.242	Canis_lupus_dingo
MGP_SPRETEiJ_G0020622	Pop1	100	72.086	ENSCHIG00000017066	POP1	100	72.211	Capra_hircus
MGP_SPRETEiJ_G0020622	Pop1	100	75.781	ENSTSYG00000003097	POP1	100	75.781	Carlito_syrichta
MGP_SPRETEiJ_G0020622	Pop1	100	72.125	ENSCAPG00000007251	POP1	100	71.762	Cavia_aperea
MGP_SPRETEiJ_G0020622	Pop1	100	74.535	ENSCPOG00000002901	POP1	100	74.168	Cavia_porcellus
MGP_SPRETEiJ_G0020622	Pop1	100	75.684	ENSCCAG00000018939	POP1	100	75.684	Cebus_capucinus
MGP_SPRETEiJ_G0020622	Pop1	100	76.270	ENSCATG00000040916	POP1	100	76.270	Cercocebus_atys
MGP_SPRETEiJ_G0020622	Pop1	100	76.787	ENSCLAG00000007208	POP1	97	76.787	Chinchilla_lanigera
MGP_SPRETEiJ_G0020622	Pop1	90	76.139	ENSCSAG00000012340	POP1	99	76.139	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0020622	Pop1	88	80.338	ENSCHOG00000011432	POP1	96	80.338	Choloepus_hoffmanni
MGP_SPRETEiJ_G0020622	Pop1	100	61.816	ENSCPBG00000006373	POP1	100	62.207	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0020622	Pop1	100	76.367	ENSCANG00000001647	POP1	100	76.367	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0020622	Pop1	100	84.055	ENSCGRG00001017308	Pop1	100	84.055	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0020622	Pop1	100	77.854	ENSCGRG00000010824	Pop1	100	77.854	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0020622	Pop1	100	44.392	ENSCSEG00000008737	POP1	100	44.106	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0020622	Pop1	100	45.559	ENSCVAG00000022248	pop1	100	45.559	Cyprinodon_variegatus
MGP_SPRETEiJ_G0020622	Pop1	100	71.375	ENSDNOG00000019974	POP1	100	71.375	Dasypus_novemcinctus
MGP_SPRETEiJ_G0020622	Pop1	100	68.061	ENSDORG00000015384	Pop1	100	67.647	Dipodomys_ordii
MGP_SPRETEiJ_G0020622	Pop1	61	34.488	FBgn0026702	l(1)G0045	70	34.380	Drosophila_melanogaster
MGP_SPRETEiJ_G0020622	Pop1	89	67.544	ENSETEG00000007839	POP1	88	67.544	Echinops_telfairi
MGP_SPRETEiJ_G0020622	Pop1	100	75.195	ENSEASG00005003189	POP1	98	75.195	Equus_asinus_asinus
MGP_SPRETEiJ_G0020622	Pop1	100	75.098	ENSECAG00000024236	POP1	100	75.098	Equus_caballus
MGP_SPRETEiJ_G0020622	Pop1	67	66.520	ENSEEUG00000003050	-	70	66.520	Erinaceus_europaeus
MGP_SPRETEiJ_G0020622	Pop1	100	45.962	ENSELUG00000003526	pop1	100	46.243	Esox_lucius
MGP_SPRETEiJ_G0020622	Pop1	100	74.707	ENSFCAG00000002168	POP1	100	74.707	Felis_catus
MGP_SPRETEiJ_G0020622	Pop1	100	56.725	ENSFALG00000005711	POP1	100	56.365	Ficedula_albicollis
MGP_SPRETEiJ_G0020622	Pop1	100	76.102	ENSFDAG00000017068	POP1	100	76.102	Fukomys_damarensis
MGP_SPRETEiJ_G0020622	Pop1	100	45.220	ENSFHEG00000019518	pop1	100	45.359	Fundulus_heteroclitus
MGP_SPRETEiJ_G0020622	Pop1	92	45.171	ENSGMOG00000000659	POP1	97	45.379	Gadus_morhua
MGP_SPRETEiJ_G0020622	Pop1	100	44.821	ENSGAFG00000019770	POP1	100	44.874	Gambusia_affinis
MGP_SPRETEiJ_G0020622	Pop1	100	43.828	ENSGACG00000003499	pop1	100	43.828	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0020622	Pop1	100	60.987	ENSGAGG00000011737	POP1	98	61.284	Gopherus_agassizii
MGP_SPRETEiJ_G0020622	Pop1	100	76.367	ENSGGOG00000003176	POP1	100	76.367	Gorilla_gorilla
MGP_SPRETEiJ_G0020622	Pop1	100	47.678	ENSHBUG00000021583	pop1	100	47.488	Haplochromis_burtoni
MGP_SPRETEiJ_G0020622	Pop1	100	75.855	ENSHGLG00000006029	POP1	100	75.855	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0020622	Pop1	100	75.855	ENSHGLG00100016879	POP1	100	75.855	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0020622	Pop1	90	48.004	ENSHCOG00000013888	pop1	96	47.391	Hippocampus_comes
MGP_SPRETEiJ_G0020622	Pop1	99	44.771	ENSIPUG00000018336	pop1	100	41.971	Ictalurus_punctatus
MGP_SPRETEiJ_G0020622	Pop1	100	77.473	ENSSTOG00000011455	POP1	97	77.473	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0020622	Pop1	100	74.730	ENSJJAG00000013325	Pop1	100	74.730	Jaculus_jaculus
MGP_SPRETEiJ_G0020622	Pop1	100	44.434	ENSKMAG00000001346	POP1	100	44.434	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0020622	Pop1	89	46.753	ENSLBEG00000024457	POP1	95	46.334	Labrus_bergylta
MGP_SPRETEiJ_G0020622	Pop1	93	55.152	ENSLACG00000012498	POP1	100	55.354	Latimeria_chalumnae
MGP_SPRETEiJ_G0020622	Pop1	100	50.194	ENSLOCG00000009817	POP1	100	50.242	Lepisosteus_oculatus
MGP_SPRETEiJ_G0020622	Pop1	100	74.903	ENSLAFG00000010770	POP1	100	74.903	Loxodonta_africana
MGP_SPRETEiJ_G0020622	Pop1	100	76.465	ENSMFAG00000000347	POP1	100	76.465	Macaca_fascicularis
MGP_SPRETEiJ_G0020622	Pop1	100	76.270	ENSMNEG00000036870	POP1	100	76.270	Macaca_nemestrina
MGP_SPRETEiJ_G0020622	Pop1	100	76.270	ENSMLEG00000034986	POP1	100	76.270	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0020622	Pop1	100	44.962	ENSMAMG00000004040	pop1	100	45.057	Mastacembelus_armatus
MGP_SPRETEiJ_G0020622	Pop1	100	47.578	ENSMZEG00005025448	pop1	100	47.293	Maylandia_zebra
MGP_SPRETEiJ_G0020622	Pop1	100	57.224	ENSMGAG00000012167	POP1	100	57.306	Meleagris_gallopavo
MGP_SPRETEiJ_G0020622	Pop1	100	83.190	ENSMAUG00000017537	Pop1	100	82.904	Mesocricetus_auratus
MGP_SPRETEiJ_G0020622	Pop1	100	76.442	ENSMICG00000004361	POP1	100	76.442	Microcebus_murinus
MGP_SPRETEiJ_G0020622	Pop1	100	82.584	ENSMOCG00000006356	Pop1	100	82.967	Microtus_ochrogaster
MGP_SPRETEiJ_G0020622	Pop1	100	43.262	ENSMMOG00000018242	pop1	100	43.262	Mola_mola
MGP_SPRETEiJ_G0020622	Pop1	100	62.753	ENSMODG00000006561	POP1	100	63.426	Monodelphis_domestica
MGP_SPRETEiJ_G0020622	Pop1	100	45.941	ENSMALG00000012621	POP1	100	46.088	Monopterus_albus
MGP_SPRETEiJ_G0020622	Pop1	100	97.033	MGP_CAROLIEiJ_G0019726	Pop1	100	97.033	Mus_caroli
MGP_SPRETEiJ_G0020622	Pop1	100	98.182	ENSMUSG00000022325	Pop1	100	98.182	Mus_musculus
MGP_SPRETEiJ_G0020622	Pop1	100	93.990	MGP_PahariEiJ_G0019735	Pop1	100	93.990	Mus_pahari
MGP_SPRETEiJ_G0020622	Pop1	100	73.930	ENSMPUG00000015250	POP1	100	73.930	Mustela_putorius_furo
MGP_SPRETEiJ_G0020622	Pop1	100	70.955	ENSMLUG00000010204	POP1	100	70.955	Myotis_lucifugus
MGP_SPRETEiJ_G0020622	Pop1	100	81.845	ENSNGAG00000001582	Pop1	100	81.845	Nannospalax_galili
MGP_SPRETEiJ_G0020622	Pop1	89	46.919	ENSNBRG00000002356	pop1	94	46.504	Neolamprologus_brichardi
MGP_SPRETEiJ_G0020622	Pop1	100	76.172	ENSNLEG00000002541	POP1	100	76.172	Nomascus_leucogenys
MGP_SPRETEiJ_G0020622	Pop1	93	56.877	ENSMEUG00000003118	POP1	98	57.084	Notamacropus_eugenii
MGP_SPRETEiJ_G0020622	Pop1	100	73.679	ENSOPRG00000007667	POP1	100	73.679	Ochotona_princeps
MGP_SPRETEiJ_G0020622	Pop1	100	75.269	ENSODEG00000003984	POP1	100	75.269	Octodon_degus
MGP_SPRETEiJ_G0020622	Pop1	100	47.388	ENSONIG00000016445	pop1	100	47.198	Oreochromis_niloticus
MGP_SPRETEiJ_G0020622	Pop1	61	71.341	ENSOANG00000001278	-	94	71.341	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0020622	Pop1	100	73.301	ENSOCUG00000017400	POP1	100	73.301	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0020622	Pop1	92	47.286	ENSORLG00000002839	pop1	100	45.629	Oryzias_latipes
MGP_SPRETEiJ_G0020622	Pop1	90	47.192	ENSORLG00020022450	POP1	96	46.695	Oryzias_latipes_hni
MGP_SPRETEiJ_G0020622	Pop1	92	47.544	ENSORLG00015012746	POP1	100	45.821	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0020622	Pop1	100	46.206	ENSOMEG00000006915	pop1	99	45.605	Oryzias_melastigma
MGP_SPRETEiJ_G0020622	Pop1	100	74.316	ENSOGAG00000001466	POP1	100	74.316	Otolemur_garnettii
MGP_SPRETEiJ_G0020622	Pop1	100	76.465	ENSPPAG00000018410	POP1	100	76.465	Pan_paniscus
MGP_SPRETEiJ_G0020622	Pop1	100	74.732	ENSPPRG00000005002	POP1	100	74.732	Panthera_pardus
MGP_SPRETEiJ_G0020622	Pop1	100	74.927	ENSPTIG00000016527	POP1	100	74.927	Panthera_tigris_altaica
MGP_SPRETEiJ_G0020622	Pop1	100	76.562	ENSPTRG00000020458	POP1	100	76.562	Pan_troglodytes
MGP_SPRETEiJ_G0020622	Pop1	100	76.367	ENSPANG00000009704	POP1	100	76.367	Papio_anubis
MGP_SPRETEiJ_G0020622	Pop1	100	48.120	ENSPKIG00000016325	POP1	100	48.219	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0020622	Pop1	100	61.116	ENSPSIG00000012343	POP1	100	61.116	Pelodiscus_sinensis
MGP_SPRETEiJ_G0020622	Pop1	90	48.640	ENSPMGG00000022253	POP1	95	47.275	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0020622	Pop1	99	84.306	ENSPEMG00000023633	Pop1	100	84.306	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0020622	Pop1	90	43.598	ENSPMAG00000003209	POP1	100	43.650	Petromyzon_marinus
MGP_SPRETEiJ_G0020622	Pop1	100	63.663	ENSPCIG00000012216	POP1	100	63.857	Phascolarctos_cinereus
MGP_SPRETEiJ_G0020622	Pop1	100	45.602	ENSPFOG00000012490	POP1	100	45.100	Poecilia_formosa
MGP_SPRETEiJ_G0020622	Pop1	100	45.254	ENSPLAG00000004646	POP1	100	44.752	Poecilia_latipinna
MGP_SPRETEiJ_G0020622	Pop1	100	45.690	ENSPMEG00000019592	POP1	100	45.281	Poecilia_mexicana
MGP_SPRETEiJ_G0020622	Pop1	100	45.202	ENSPREG00000020951	POP1	100	45.202	Poecilia_reticulata
MGP_SPRETEiJ_G0020622	Pop1	100	76.074	ENSPPYG00000018777	POP1	100	76.074	Pongo_abelii
MGP_SPRETEiJ_G0020622	Pop1	100	68.488	ENSPCAG00000016662	POP1	100	68.488	Procavia_capensis
MGP_SPRETEiJ_G0020622	Pop1	100	76.637	ENSPCOG00000019420	POP1	100	76.637	Propithecus_coquereli
MGP_SPRETEiJ_G0020622	Pop1	100	73.854	ENSPVAG00000014468	POP1	100	73.854	Pteropus_vampyrus
MGP_SPRETEiJ_G0020622	Pop1	89	48.108	ENSPNYG00000004476	pop1	95	48.128	Pundamilia_nyererei
MGP_SPRETEiJ_G0020622	Pop1	100	44.167	ENSPNAG00000000265	pop1	100	43.981	Pygocentrus_nattereri
MGP_SPRETEiJ_G0020622	Pop1	100	90.335	ENSRNOG00000005243	Pop1	100	90.335	Rattus_norvegicus
MGP_SPRETEiJ_G0020622	Pop1	100	76.270	ENSRBIG00000007996	POP1	100	76.270	Rhinopithecus_bieti
MGP_SPRETEiJ_G0020622	Pop1	100	76.270	ENSRROG00000012334	POP1	100	76.270	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0020622	Pop1	99	76.383	ENSSBOG00000020830	POP1	100	76.383	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0020622	Pop1	100	63.343	ENSSHAG00000000296	POP1	100	62.696	Sarcophilus_harrisii
MGP_SPRETEiJ_G0020622	Pop1	100	47.679	ENSSFOG00015007429	pop1	99	47.679	Scleropages_formosus
MGP_SPRETEiJ_G0020622	Pop1	86	50.384	ENSSMAG00000010467	POP1	98	46.362	Scophthalmus_maximus
MGP_SPRETEiJ_G0020622	Pop1	100	45.152	ENSSDUG00000007817	POP1	100	45.541	Seriola_dumerili
MGP_SPRETEiJ_G0020622	Pop1	100	45.247	ENSSLDG00000012565	POP1	100	45.636	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0020622	Pop1	100	55.696	ENSSPUG00000003550	-	100	56.128	Sphenodon_punctatus
MGP_SPRETEiJ_G0020622	Pop1	90	47.454	ENSSPAG00000014955	pop1	94	47.454	Stegastes_partitus
MGP_SPRETEiJ_G0020622	Pop1	100	74.238	ENSSSCG00000006078	POP1	100	74.238	Sus_scrofa
MGP_SPRETEiJ_G0020622	Pop1	92	55.626	ENSTGUG00000012011	-	100	55.614	Taeniopygia_guttata
MGP_SPRETEiJ_G0020622	Pop1	91	46.596	ENSTRUG00000010856	pop1	94	46.391	Takifugu_rubripes
MGP_SPRETEiJ_G0020622	Pop1	93	46.901	ENSTNIG00000013297	pop1	100	47.004	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0020622	Pop1	95	72.541	ENSTBEG00000014214	POP1	99	72.541	Tupaia_belangeri
MGP_SPRETEiJ_G0020622	Pop1	100	72.656	ENSTTRG00000016071	POP1	100	72.656	Tursiops_truncatus
MGP_SPRETEiJ_G0020622	Pop1	99	69.793	ENSUAMG00000017309	POP1	100	69.793	Ursus_americanus
MGP_SPRETEiJ_G0020622	Pop1	91	85.830	ENSUMAG00000016952	POP1	100	85.830	Ursus_maritimus
MGP_SPRETEiJ_G0020622	Pop1	83	84.982	ENSVPAG00000008278	POP1	82	84.982	Vicugna_pacos
MGP_SPRETEiJ_G0020622	Pop1	100	73.340	ENSVVUG00000010994	POP1	100	73.340	Vulpes_vulpes
MGP_SPRETEiJ_G0020622	Pop1	100	40.822	ENSXCOG00000017043	POP1	100	40.631	Xiphophorus_couchianus
MGP_SPRETEiJ_G0020622	Pop1	100	45.096	ENSXMAG00000002472	POP1	100	45.000	Xiphophorus_maculatus