EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0020678 (Gene tree)
Gene ID: -
Gene Symbol: Utp23
Alias: 1700010I21Rik|D530033C11Rik
Full Name: UTP23 small subunit processome component
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 7415 bases
Position: chr15:50247096-50254510
Accession: 1925831
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0039974	Fcf1	PF04900.12	1.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0039975	-	610	-	MGP_SPRETEiJ_P0039975	120 (aa)	-	-
MGP_SPRETEiJ_T0039974	-	994	-	MGP_SPRETEiJ_P0039974	257 (aa)	-	-
MGP_SPRETEiJ_T0039976	-	768	-	MGP_SPRETEiJ_P0039976	68 (aa)	-	UPI000154A356

Gene Model

Click here to download MGP_SPRETEiJ_G0020678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0020678's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0020678	Utp23	97	87.149	ENSG00000147679	UTP23	90	98.387	Homo_sapiens
MGP_SPRETEiJ_G0020678	Utp23	67	52.907	ENSAPOG00000013233	UTP23	62	58.219	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0020678	Utp23	81	60.287	ENSAPOG00000004620	utp23	83	60.287	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0020678	Utp23	57	58.219	ENSAPOG00000004608	-	69	58.219	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0020678	Utp23	96	89.431	ENSAMEG00000010317	UTP23	99	89.431	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0020678	Utp23	81	61.722	ENSACIG00000013638	utp23	79	61.722	Amphilophus_citrinellus
MGP_SPRETEiJ_G0020678	Utp23	81	61.722	ENSAOCG00000016307	utp23	83	61.722	Amphiprion_ocellaris
MGP_SPRETEiJ_G0020678	Utp23	81	61.722	ENSAPEG00000018976	utp23	83	61.722	Amphiprion_percula
MGP_SPRETEiJ_G0020678	Utp23	85	62.385	ENSATEG00000007509	utp23	82	62.201	Anabas_testudineus
MGP_SPRETEiJ_G0020678	Utp23	81	68.421	ENSACAG00000011061	UTP23	82	68.421	Anolis_carolinensis
MGP_SPRETEiJ_G0020678	Utp23	97	86.747	ENSANAG00000025273	-	99	86.747	Aotus_nancymaae
MGP_SPRETEiJ_G0020678	Utp23	97	85.944	ENSANAG00000036252	-	96	85.944	Aotus_nancymaae
MGP_SPRETEiJ_G0020678	Utp23	91	56.596	ENSAMXG00000020989	utp23	82	57.895	Astyanax_mexicanus
MGP_SPRETEiJ_G0020678	Utp23	97	87.149	ENSBTAG00000040422	UTP23	100	87.149	Bos_taurus
MGP_SPRETEiJ_G0020678	Utp23	84	39.908	WBGene00016411	C34E10.10	84	39.810	Caenorhabditis_elegans
MGP_SPRETEiJ_G0020678	Utp23	97	87.149	ENSCJAG00000005903	UTP23	99	87.149	Callithrix_jacchus
MGP_SPRETEiJ_G0020678	Utp23	96	88.710	ENSCAFG00000000821	UTP23	100	88.710	Canis_familiaris
MGP_SPRETEiJ_G0020678	Utp23	96	88.710	ENSCAFG00020004174	UTP23	100	88.710	Canis_lupus_dingo
MGP_SPRETEiJ_G0020678	Utp23	97	87.550	ENSCHIG00000019828	UTP23	100	87.550	Capra_hircus
MGP_SPRETEiJ_G0020678	Utp23	97	85.944	ENSTSYG00000001644	UTP23	100	85.944	Carlito_syrichta
MGP_SPRETEiJ_G0020678	Utp23	87	86.607	ENSCPOG00000034561	UTP23	83	86.607	Cavia_porcellus
MGP_SPRETEiJ_G0020678	Utp23	97	86.747	ENSCCAG00000030228	UTP23	99	86.747	Cebus_capucinus
MGP_SPRETEiJ_G0020678	Utp23	97	87.149	ENSCATG00000035129	UTP23	99	87.149	Cercocebus_atys
MGP_SPRETEiJ_G0020678	Utp23	89	80.702	ENSCLAG00000000531	-	98	80.357	Chinchilla_lanigera
MGP_SPRETEiJ_G0020678	Utp23	95	86.640	ENSCLAG00000005108	-	99	86.694	Chinchilla_lanigera
MGP_SPRETEiJ_G0020678	Utp23	97	86.345	ENSCSAG00000010933	UTP23	99	86.345	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0020678	Utp23	96	87.952	ENSCHOG00000003145	UTP23	99	87.952	Choloepus_hoffmanni
MGP_SPRETEiJ_G0020678	Utp23	86	72.523	ENSCPBG00000001634	UTP23	89	72.197	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0020678	Utp23	81	45.933	ENSCING00000012577	-	94	45.933	Ciona_intestinalis
MGP_SPRETEiJ_G0020678	Utp23	81	45.455	ENSCSAVG00000003273	-	95	44.976	Ciona_savignyi
MGP_SPRETEiJ_G0020678	Utp23	96	86.235	ENSCANG00000028461	UTP23	92	86.235	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0020678	Utp23	97	91.566	ENSCGRG00001005218	Utp23	100	91.566	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0020678	Utp23	84	64.651	ENSCSEG00000011409	utp23	81	64.115	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0020678	Utp23	87	57.589	ENSCVAG00000003180	utp23	87	57.589	Cyprinodon_variegatus
MGP_SPRETEiJ_G0020678	Utp23	81	59.330	ENSDARG00000105012	utp23	81	58.852	Danio_rerio
MGP_SPRETEiJ_G0020678	Utp23	96	87.045	ENSDNOG00000033602	UTP23	98	87.045	Dasypus_novemcinctus
MGP_SPRETEiJ_G0020678	Utp23	97	77.108	ENSDORG00000029054	-	92	77.108	Dipodomys_ordii
MGP_SPRETEiJ_G0020678	Utp23	56	82.517	ENSDORG00000005950	-	99	82.517	Dipodomys_ordii
MGP_SPRETEiJ_G0020678	Utp23	81	39.423	FBgn0031361	CG17652	83	39.423	Drosophila_melanogaster
MGP_SPRETEiJ_G0020678	Utp23	97	84.400	ENSETEG00000015401	-	99	80.321	Echinops_telfairi
MGP_SPRETEiJ_G0020678	Utp23	97	58.333	ENSETEG00000017109	-	99	56.972	Echinops_telfairi
MGP_SPRETEiJ_G0020678	Utp23	83	52.804	ENSEBUG00000009876	utp23	90	51.675	Eptatretus_burgeri
MGP_SPRETEiJ_G0020678	Utp23	97	85.141	ENSEASG00005023141	UTP23	100	85.141	Equus_asinus_asinus
MGP_SPRETEiJ_G0020678	Utp23	97	85.944	ENSECAG00000026844	UTP23	100	85.944	Equus_caballus
MGP_SPRETEiJ_G0020678	Utp23	97	87.550	ENSEEUG00000004503	UTP23	99	87.550	Erinaceus_europaeus
MGP_SPRETEiJ_G0020678	Utp23	81	60.766	ENSELUG00000005602	utp23	83	60.766	Esox_lucius
MGP_SPRETEiJ_G0020678	Utp23	96	88.710	ENSFCAG00000036051	UTP23	100	88.710	Felis_catus
MGP_SPRETEiJ_G0020678	Utp23	87	67.111	ENSFALG00000002299	UTP23	90	67.111	Ficedula_albicollis
MGP_SPRETEiJ_G0020678	Utp23	97	86.454	ENSFDAG00000021034	UTP23	100	86.853	Fukomys_damarensis
MGP_SPRETEiJ_G0020678	Utp23	85	61.468	ENSFHEG00000008581	utp23	86	60.550	Fundulus_heteroclitus
MGP_SPRETEiJ_G0020678	Utp23	91	56.410	ENSGMOG00000015495	utp23	87	59.330	Gadus_morhua
MGP_SPRETEiJ_G0020678	Utp23	86	67.568	ENSGALG00000032400	UTP23	90	66.964	Gallus_gallus
MGP_SPRETEiJ_G0020678	Utp23	81	60.287	ENSGAFG00000002063	utp23	80	60.287	Gambusia_affinis
MGP_SPRETEiJ_G0020678	Utp23	81	58.373	ENSGACG00000002979	utp23	84	58.373	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0020678	Utp23	97	86.345	ENSGGOG00000013203	UTP23	99	86.345	Gorilla_gorilla
MGP_SPRETEiJ_G0020678	Utp23	85	62.385	ENSHBUG00000023376	utp23	82	62.201	Haplochromis_burtoni
MGP_SPRETEiJ_G0020678	Utp23	97	74.104	ENSHGLG00000008717	-	100	74.502	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0020678	Utp23	97	85.657	ENSHGLG00000004025	UTP23	100	85.657	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0020678	Utp23	97	81.673	ENSHGLG00000020901	-	93	81.673	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0020678	Utp23	80	79.024	ENSHGLG00100012817	-	93	79.426	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0020678	Utp23	97	85.657	ENSHGLG00100018875	UTP23	100	85.657	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0020678	Utp23	74	61.376	ENSHCOG00000007006	utp23	84	60.766	Hippocampus_comes
MGP_SPRETEiJ_G0020678	Utp23	86	59.276	ENSIPUG00000014437	utp23	82	59.809	Ictalurus_punctatus
MGP_SPRETEiJ_G0020678	Utp23	97	88.353	ENSSTOG00000001411	UTP23	100	88.353	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0020678	Utp23	96	54.724	ENSKMAG00000002262	utp23	82	58.852	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0020678	Utp23	91	57.025	ENSLBEG00000012819	utp23	81	59.048	Labrus_bergylta
MGP_SPRETEiJ_G0020678	Utp23	88	65.639	ENSLACG00000014611	UTP23	89	65.625	Latimeria_chalumnae
MGP_SPRETEiJ_G0020678	Utp23	91	63.519	ENSLOCG00000003289	utp23	88	64.286	Lepisosteus_oculatus
MGP_SPRETEiJ_G0020678	Utp23	97	88.000	ENSLAFG00000001282	UTP23	100	88.000	Loxodonta_africana
MGP_SPRETEiJ_G0020678	Utp23	97	86.747	ENSMFAG00000003374	UTP23	99	86.747	Macaca_fascicularis
MGP_SPRETEiJ_G0020678	Utp23	97	86.345	ENSMMUG00000020284	UTP23	99	86.345	Macaca_mulatta
MGP_SPRETEiJ_G0020678	Utp23	97	86.747	ENSMNEG00000028668	UTP23	99	86.747	Macaca_nemestrina
MGP_SPRETEiJ_G0020678	Utp23	97	86.345	ENSMLEG00000032668	UTP23	93	86.345	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0020678	Utp23	96	57.661	ENSMAMG00000003259	utp23	83	60.287	Mastacembelus_armatus
MGP_SPRETEiJ_G0020678	Utp23	85	62.385	ENSMZEG00005026398	utp23	82	62.201	Maylandia_zebra
MGP_SPRETEiJ_G0020678	Utp23	86	67.568	ENSMGAG00000012472	UTP23	90	66.964	Meleagris_gallopavo
MGP_SPRETEiJ_G0020678	Utp23	55	90.845	ENSMAUG00000017455	Utp23	99	90.845	Mesocricetus_auratus
MGP_SPRETEiJ_G0020678	Utp23	96	88.710	ENSMICG00000034720	UTP23	100	88.710	Microcebus_murinus
MGP_SPRETEiJ_G0020678	Utp23	87	58.482	ENSMMOG00000014498	utp23	84	61.244	Mola_mola
MGP_SPRETEiJ_G0020678	Utp23	84	81.567	ENSMODG00000004140	UTP23	86	81.567	Monodelphis_domestica
MGP_SPRETEiJ_G0020678	Utp23	91	59.746	ENSMALG00000010867	utp23	85	62.201	Monopterus_albus
MGP_SPRETEiJ_G0020678	Utp23	97	97.590	MGP_CAROLIEiJ_G0019781	Utp23	100	97.590	Mus_caroli
MGP_SPRETEiJ_G0020678	Utp23	97	99.197	ENSMUSG00000022313	Utp23	100	99.197	Mus_musculus
MGP_SPRETEiJ_G0020678	Utp23	95	87.755	ENSMPUG00000000987	UTP23	99	87.398	Mustela_putorius_furo
MGP_SPRETEiJ_G0020678	Utp23	97	86.345	ENSMLUG00000004345	UTP23	100	86.345	Myotis_lucifugus
MGP_SPRETEiJ_G0020678	Utp23	85	62.844	ENSNBRG00000012946	utp23	82	62.679	Neolamprologus_brichardi
MGP_SPRETEiJ_G0020678	Utp23	97	86.747	ENSNLEG00000032995	UTP23	92	86.747	Nomascus_leucogenys
MGP_SPRETEiJ_G0020678	Utp23	87	78.924	ENSMEUG00000001566	UTP23	96	79.556	Notamacropus_eugenii
MGP_SPRETEiJ_G0020678	Utp23	97	81.526	ENSOPRG00000011227	UTP23	99	81.526	Ochotona_princeps
MGP_SPRETEiJ_G0020678	Utp23	97	81.275	ENSODEG00000018881	-	100	80.876	Octodon_degus
MGP_SPRETEiJ_G0020678	Utp23	66	62.353	ENSONIG00000013525	utp23	80	62.112	Oreochromis_niloticus
MGP_SPRETEiJ_G0020678	Utp23	87	60.889	ENSOANG00000004878	UTP23	87	60.377	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0020678	Utp23	97	86.345	ENSOCUG00000007541	UTP23	99	86.345	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0020678	Utp23	91	56.540	ENSORLG00000001784	utp23	82	58.373	Oryzias_latipes
MGP_SPRETEiJ_G0020678	Utp23	91	57.384	ENSORLG00020009731	utp23	82	58.852	Oryzias_latipes_hni
MGP_SPRETEiJ_G0020678	Utp23	91	57.384	ENSORLG00015016970	utp23	82	59.330	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0020678	Utp23	85	59.174	ENSOMEG00000008767	utp23	82	58.852	Oryzias_melastigma
MGP_SPRETEiJ_G0020678	Utp23	55	74.648	ENSOGAG00000033060	-	100	73.944	Otolemur_garnettii
MGP_SPRETEiJ_G0020678	Utp23	96	85.887	ENSOGAG00000017024	UTP23	100	85.887	Otolemur_garnettii
MGP_SPRETEiJ_G0020678	Utp23	97	87.550	ENSOARG00000010483	UTP23	100	87.550	Ovis_aries
MGP_SPRETEiJ_G0020678	Utp23	97	86.345	ENSPPAG00000028660	UTP23	99	86.345	Pan_paniscus
MGP_SPRETEiJ_G0020678	Utp23	96	88.710	ENSPPRG00000024902	UTP23	100	88.710	Panthera_pardus
MGP_SPRETEiJ_G0020678	Utp23	96	88.710	ENSPTIG00000019925	UTP23	100	88.710	Panthera_tigris_altaica
MGP_SPRETEiJ_G0020678	Utp23	97	86.345	ENSPTRG00000020521	UTP23	92	86.345	Pan_troglodytes
MGP_SPRETEiJ_G0020678	Utp23	97	86.345	ENSPANG00000011559	UTP23	99	86.345	Papio_anubis
MGP_SPRETEiJ_G0020678	Utp23	92	61.765	ENSPKIG00000018790	utp23	88	63.158	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0020678	Utp23	87	71.300	ENSPSIG00000013132	UTP23	89	71.300	Pelodiscus_sinensis
MGP_SPRETEiJ_G0020678	Utp23	87	57.143	ENSPMGG00000019770	utp23	89	57.143	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0020678	Utp23	87	78.475	ENSPCIG00000018598	UTP23	86	78.475	Phascolarctos_cinereus
MGP_SPRETEiJ_G0020678	Utp23	88	59.556	ENSPFOG00000003590	utp23	82	59.809	Poecilia_formosa
MGP_SPRETEiJ_G0020678	Utp23	88	59.556	ENSPLAG00000017925	utp23	82	59.809	Poecilia_latipinna
MGP_SPRETEiJ_G0020678	Utp23	88	59.556	ENSPMEG00000006728	utp23	82	59.809	Poecilia_mexicana
MGP_SPRETEiJ_G0020678	Utp23	89	58.009	ENSPREG00000002478	utp23	90	58.009	Poecilia_reticulata
MGP_SPRETEiJ_G0020678	Utp23	97	86.747	ENSPPYG00000018831	UTP23	99	86.747	Pongo_abelii
MGP_SPRETEiJ_G0020678	Utp23	96	84.739	ENSPCAG00000009093	UTP23	99	84.739	Procavia_capensis
MGP_SPRETEiJ_G0020678	Utp23	55	83.803	ENSPCOG00000015084	-	100	83.803	Propithecus_coquereli
MGP_SPRETEiJ_G0020678	Utp23	97	87.550	ENSPVAG00000002661	UTP23	99	87.550	Pteropus_vampyrus
MGP_SPRETEiJ_G0020678	Utp23	85	61.927	ENSPNYG00000017636	utp23	82	61.722	Pundamilia_nyererei
MGP_SPRETEiJ_G0020678	Utp23	80	59.024	ENSPNAG00000024538	utp23	86	59.809	Pygocentrus_nattereri
MGP_SPRETEiJ_G0020678	Utp23	97	93.625	ENSRNOG00000004387	Utp23	100	94.422	Rattus_norvegicus
MGP_SPRETEiJ_G0020678	Utp23	97	86.747	ENSRBIG00000026267	UTP23	99	86.747	Rhinopithecus_bieti
MGP_SPRETEiJ_G0020678	Utp23	97	86.747	ENSRROG00000028593	UTP23	99	86.747	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0020678	Utp23	89	30.901	YOR004W	-	71	30.601	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0020678	Utp23	97	85.944	ENSSBOG00000018914	UTP23	99	85.944	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0020678	Utp23	61	73.885	ENSSHAG00000015399	UTP23	80	73.885	Sarcophilus_harrisii
MGP_SPRETEiJ_G0020678	Utp23	83	63.084	ENSSFOG00015009226	utp23	91	62.201	Scleropages_formosus
MGP_SPRETEiJ_G0020678	Utp23	94	58.824	ENSSMAG00000020390	utp23	82	63.636	Scophthalmus_maximus
MGP_SPRETEiJ_G0020678	Utp23	91	60.426	ENSSDUG00000020272	utp23	87	62.201	Seriola_dumerili
MGP_SPRETEiJ_G0020678	Utp23	91	60.593	ENSSLDG00000000393	utp23	87	62.201	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0020678	Utp23	84	72.222	ENSSPUG00000011572	UTP23	87	72.222	Sphenodon_punctatus
MGP_SPRETEiJ_G0020678	Utp23	81	60.766	ENSSPAG00000013890	utp23	84	60.766	Stegastes_partitus
MGP_SPRETEiJ_G0020678	Utp23	97	86.508	ENSSSCG00000030493	UTP23	100	86.508	Sus_scrofa
MGP_SPRETEiJ_G0020678	Utp23	87	64.000	ENSTGUG00000015403	-	95	64.000	Taeniopygia_guttata
MGP_SPRETEiJ_G0020678	Utp23	87	65.778	ENSTGUG00000012316	-	90	65.778	Taeniopygia_guttata
MGP_SPRETEiJ_G0020678	Utp23	97	54.545	ENSTRUG00000023365	utp23	82	59.809	Takifugu_rubripes
MGP_SPRETEiJ_G0020678	Utp23	97	85.141	ENSTBEG00000008655	UTP23	99	85.141	Tupaia_belangeri
MGP_SPRETEiJ_G0020678	Utp23	97	85.944	ENSTTRG00000015295	UTP23	100	85.944	Tursiops_truncatus
MGP_SPRETEiJ_G0020678	Utp23	95	89.796	ENSUMAG00000020439	UTP23	99	89.431	Ursus_maritimus
MGP_SPRETEiJ_G0020678	Utp23	97	87.550	ENSVPAG00000009358	UTP23	100	87.550	Vicugna_pacos
MGP_SPRETEiJ_G0020678	Utp23	96	88.710	ENSVVUG00000015307	UTP23	100	88.710	Vulpes_vulpes
MGP_SPRETEiJ_G0020678	Utp23	81	66.986	ENSXETG00000020781	utp23	90	66.368	Xenopus_tropicalis
MGP_SPRETEiJ_G0020678	Utp23	81	59.330	ENSXCOG00000019504	utp23	82	59.330	Xiphophorus_couchianus
MGP_SPRETEiJ_G0020678	Utp23	81	59.330	ENSXMAG00000014058	utp23	82	59.330	Xiphophorus_maculatus