EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0020717 (Gene tree)
Gene ID: -
Gene Symbol: Trmt12
Alias: 4632406N01Rik|Tyw2
Full Name: tRNA methyltranferase 12
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 4130 bases
Position: chr15:57553459-57557588
Accession: 1915510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0040072	Met_10	PF02475.16	7.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0040072	-	4130	-	MGP_SPRETEiJ_P0040072	446 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0020717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0020717's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0020717	Trmt12	98	80.778	ENSG00000183665	TRMT12	98	80.778	Homo_sapiens
MGP_SPRETEiJ_G0020717	Trmt12	93	51.090	ENSAPOG00000011979	trmt12	97	51.090	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0020717	Trmt12	97	79.493	ENSAMEG00000019612	TRMT12	97	79.493	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0020717	Trmt12	91	49.261	ENSACIG00000012982	trmt12	99	49.261	Amphilophus_citrinellus
MGP_SPRETEiJ_G0020717	Trmt12	91	50.493	ENSAOCG00000020570	trmt12	96	51.523	Amphiprion_ocellaris
MGP_SPRETEiJ_G0020717	Trmt12	91	50.246	ENSAPEG00000006335	trmt12	96	51.269	Amphiprion_percula
MGP_SPRETEiJ_G0020717	Trmt12	93	51.574	ENSATEG00000018316	trmt12	97	51.574	Anabas_testudineus
MGP_SPRETEiJ_G0020717	Trmt12	92	50.000	ENSACLG00000001008	trmt12	96	50.000	Astatotilapia_calliptera
MGP_SPRETEiJ_G0020717	Trmt12	93	52.123	ENSAMXG00000040366	trmt12	97	52.123	Astyanax_mexicanus
MGP_SPRETEiJ_G0020717	Trmt12	95	81.221	ENSBTAG00000020398	TRMT12	92	81.221	Bos_taurus
MGP_SPRETEiJ_G0020717	Trmt12	51	37.991	WBGene00009586	F40F9.10	53	36.145	Caenorhabditis_elegans
MGP_SPRETEiJ_G0020717	Trmt12	98	78.947	ENSCJAG00000022174	TRMT12	98	78.947	Callithrix_jacchus
MGP_SPRETEiJ_G0020717	Trmt12	97	78.802	ENSCAFG00000001040	TRMT12	99	78.802	Canis_familiaris
MGP_SPRETEiJ_G0020717	Trmt12	97	78.802	ENSCAFG00020006500	TRMT12	99	78.802	Canis_lupus_dingo
MGP_SPRETEiJ_G0020717	Trmt12	95	82.270	ENSCHIG00000016574	TRMT12	96	82.270	Capra_hircus
MGP_SPRETEiJ_G0020717	Trmt12	95	78.774	ENSCPOG00000026520	TRMT12	95	78.774	Cavia_porcellus
MGP_SPRETEiJ_G0020717	Trmt12	98	80.320	ENSCSAG00000018615	TRMT12	98	80.320	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0020717	Trmt12	95	63.182	ENSCPBG00000014290	TRMT12	96	63.182	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0020717	Trmt12	70	44.127	ENSCING00000019633	-	97	44.127	Ciona_intestinalis
MGP_SPRETEiJ_G0020717	Trmt12	72	45.938	ENSCSAVG00000000415	-	93	45.938	Ciona_savignyi
MGP_SPRETEiJ_G0020717	Trmt12	96	64.977	ENSCGRG00001014834	Trmt12	98	64.977	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0020717	Trmt12	94	49.169	ENSCSEG00000002675	trmt12	94	49.169	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0020717	Trmt12	93	49.640	ENSCVAG00000005590	trmt12	98	49.522	Cyprinodon_variegatus
MGP_SPRETEiJ_G0020717	Trmt12	93	49.760	ENSDARG00000060338	trmt12	96	53.114	Danio_rerio
MGP_SPRETEiJ_G0020717	Trmt12	95	74.413	ENSETEG00000009373	TRMT12	95	74.413	Echinops_telfairi
MGP_SPRETEiJ_G0020717	Trmt12	97	80.184	ENSEASG00005022441	TRMT12	99	80.184	Equus_asinus_asinus
MGP_SPRETEiJ_G0020717	Trmt12	97	75.058	ENSEEUG00000004844	TRMT12	97	75.058	Erinaceus_europaeus
MGP_SPRETEiJ_G0020717	Trmt12	93	50.000	ENSELUG00000004240	trmt12	100	50.633	Esox_lucius
MGP_SPRETEiJ_G0020717	Trmt12	63	63.604	ENSFALG00000003825	TRMT12	97	71.028	Ficedula_albicollis
MGP_SPRETEiJ_G0020717	Trmt12	97	78.571	ENSFDAG00000016647	TRMT12	99	78.571	Fukomys_damarensis
MGP_SPRETEiJ_G0020717	Trmt12	89	42.643	ENSFHEG00000017338	trmt12	96	42.394	Fundulus_heteroclitus
MGP_SPRETEiJ_G0020717	Trmt12	79	64.426	ENSGALG00000006773	TRMT12	76	64.426	Gallus_gallus
MGP_SPRETEiJ_G0020717	Trmt12	92	48.786	ENSGAFG00000020056	trmt12	96	48.786	Gambusia_affinis
MGP_SPRETEiJ_G0020717	Trmt12	87	52.073	ENSGACG00000017351	trmt12	100	50.732	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0020717	Trmt12	97	62.443	ENSGAGG00000006032	TRMT12	99	62.443	Gopherus_agassizii
MGP_SPRETEiJ_G0020717	Trmt12	92	50.000	ENSHBUG00000016412	trmt12	96	50.000	Haplochromis_burtoni
MGP_SPRETEiJ_G0020717	Trmt12	97	79.263	ENSHGLG00000020498	TRMT12	99	79.263	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0020717	Trmt12	97	79.493	ENSHGLG00100020132	TRMT12	99	79.493	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0020717	Trmt12	92	49.515	ENSHCOG00000005050	trmt12	95	52.857	Hippocampus_comes
MGP_SPRETEiJ_G0020717	Trmt12	95	50.000	ENSIPUG00000018011	trmt12	91	50.000	Ictalurus_punctatus
MGP_SPRETEiJ_G0020717	Trmt12	98	79.909	ENSSTOG00000030617	TRMT12	99	80.594	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0020717	Trmt12	93	49.279	ENSKMAG00000000891	trmt12	97	49.279	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0020717	Trmt12	53	55.042	ENSLBEG00000017456	-	88	55.042	Labrus_bergylta
MGP_SPRETEiJ_G0020717	Trmt12	92	47.573	ENSLBEG00000028712	trmt12	96	47.573	Labrus_bergylta
MGP_SPRETEiJ_G0020717	Trmt12	97	56.502	ENSLACG00000015869	TRMT12	98	56.502	Latimeria_chalumnae
MGP_SPRETEiJ_G0020717	Trmt12	95	56.368	ENSLOCG00000015290	trmt12	99	56.368	Lepisosteus_oculatus
MGP_SPRETEiJ_G0020717	Trmt12	95	80.047	ENSLAFG00000012519	TRMT12	97	80.047	Loxodonta_africana
MGP_SPRETEiJ_G0020717	Trmt12	97	81.567	ENSMMUG00000015490	TRMT12	98	81.567	Macaca_mulatta
MGP_SPRETEiJ_G0020717	Trmt12	93	49.153	ENSMAMG00000020311	trmt12	97	49.153	Mastacembelus_armatus
MGP_SPRETEiJ_G0020717	Trmt12	92	50.000	ENSMZEG00005007349	trmt12	96	50.000	Maylandia_zebra
MGP_SPRETEiJ_G0020717	Trmt12	95	60.000	ENSMGAG00000004174	TRMT12	95	60.000	Meleagris_gallopavo
MGP_SPRETEiJ_G0020717	Trmt12	91	49.631	ENSMMOG00000000412	trmt12	96	49.631	Mola_mola
MGP_SPRETEiJ_G0020717	Trmt12	98	67.431	ENSMODG00000011798	-	89	67.431	Monodelphis_domestica
MGP_SPRETEiJ_G0020717	Trmt12	97	65.438	ENSMODG00000021403	-	97	65.438	Monodelphis_domestica
MGP_SPRETEiJ_G0020717	Trmt12	92	50.728	ENSMALG00000008668	trmt12	96	50.728	Monopterus_albus
MGP_SPRETEiJ_G0020717	Trmt12	97	97.222	MGP_CAROLIEiJ_G0019820	Trmt12	97	97.222	Mus_caroli
MGP_SPRETEiJ_G0020717	Trmt12	100	99.103	ENSMUSG00000037085	Trmt12	100	99.103	Mus_musculus
MGP_SPRETEiJ_G0020717	Trmt12	97	93.056	MGP_PahariEiJ_G0019829	Trmt12	97	93.056	Mus_pahari
MGP_SPRETEiJ_G0020717	Trmt12	97	79.954	ENSMPUG00000019150	TRMT12	97	79.954	Mustela_putorius_furo
MGP_SPRETEiJ_G0020717	Trmt12	97	77.189	ENSMLUG00000003753	TRMT12	99	77.189	Myotis_lucifugus
MGP_SPRETEiJ_G0020717	Trmt12	97	82.448	ENSNGAG00000014548	Trmt12	99	82.448	Nannospalax_galili
MGP_SPRETEiJ_G0020717	Trmt12	91	50.369	ENSNBRG00000021510	trmt12	95	50.369	Neolamprologus_brichardi
MGP_SPRETEiJ_G0020717	Trmt12	97	70.183	ENSOPRG00000008067	TRMT12	98	70.183	Ochotona_princeps
MGP_SPRETEiJ_G0020717	Trmt12	97	79.032	ENSODEG00000018933	TRMT12	99	79.032	Octodon_degus
MGP_SPRETEiJ_G0020717	Trmt12	92	50.485	ENSONIG00000002614	trmt12	96	50.485	Oreochromis_niloticus
MGP_SPRETEiJ_G0020717	Trmt12	97	65.148	ENSOANG00000009987	TRMT12	100	65.148	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0020717	Trmt12	99	72.036	ENSOCUG00000026379	TRMT12	99	72.036	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0020717	Trmt12	92	50.242	ENSORLG00000001280	trmt12	96	50.242	Oryzias_latipes
MGP_SPRETEiJ_G0020717	Trmt12	92	50.000	ENSORLG00020000708	trmt12	96	50.000	Oryzias_latipes_hni
MGP_SPRETEiJ_G0020717	Trmt12	92	50.483	ENSORLG00015012344	trmt12	96	50.483	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0020717	Trmt12	93	50.361	ENSOMEG00000015267	trmt12	95	50.361	Oryzias_melastigma
MGP_SPRETEiJ_G0020717	Trmt12	97	79.358	ENSOGAG00000015845	TRMT12	99	79.358	Otolemur_garnettii
MGP_SPRETEiJ_G0020717	Trmt12	95	54.137	ENSPKIG00000004640	trmt12	99	54.369	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0020717	Trmt12	58	65.185	ENSPSIG00000003476	TRMT12	99	65.185	Pelodiscus_sinensis
MGP_SPRETEiJ_G0020717	Trmt12	93	47.711	ENSPMGG00000016356	trmt12	94	47.711	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0020717	Trmt12	99	66.968	ENSPCIG00000002967	TRMT12	91	66.968	Phascolarctos_cinereus
MGP_SPRETEiJ_G0020717	Trmt12	97	45.940	ENSPFOG00000016931	trmt12	99	45.940	Poecilia_formosa
MGP_SPRETEiJ_G0020717	Trmt12	92	47.087	ENSPLAG00000020621	trmt12	96	47.087	Poecilia_latipinna
MGP_SPRETEiJ_G0020717	Trmt12	92	48.544	ENSPMEG00000000818	trmt12	96	48.544	Poecilia_mexicana
MGP_SPRETEiJ_G0020717	Trmt12	92	47.816	ENSPREG00000011621	trmt12	96	48.301	Poecilia_reticulata
MGP_SPRETEiJ_G0020717	Trmt12	98	81.007	ENSPPYG00000018866	TRMT12	98	81.007	Pongo_abelii
MGP_SPRETEiJ_G0020717	Trmt12	96	77.494	ENSPCAG00000000556	TRMT12	97	77.494	Procavia_capensis
MGP_SPRETEiJ_G0020717	Trmt12	97	78.571	ENSPVAG00000009149	TRMT12	98	78.571	Pteropus_vampyrus
MGP_SPRETEiJ_G0020717	Trmt12	91	49.754	ENSPNYG00000010696	trmt12	99	49.754	Pundamilia_nyererei
MGP_SPRETEiJ_G0020717	Trmt12	95	49.770	ENSPNAG00000019028	trmt12	99	49.770	Pygocentrus_nattereri
MGP_SPRETEiJ_G0020717	Trmt12	97	90.509	ENSRNOG00000008978	Trmt12	99	90.509	Rattus_norvegicus
MGP_SPRETEiJ_G0020717	Trmt12	96	67.056	ENSSHAG00000003345	TRMT12	95	67.056	Sarcophilus_harrisii
MGP_SPRETEiJ_G0020717	Trmt12	95	52.693	ENSSFOG00015006090	trmt12	99	52.693	Scleropages_formosus
MGP_SPRETEiJ_G0020717	Trmt12	93	49.879	ENSSMAG00000013247	trmt12	97	49.879	Scophthalmus_maximus
MGP_SPRETEiJ_G0020717	Trmt12	88	51.786	ENSSDUG00000006168	trmt12	92	51.786	Seriola_dumerili
MGP_SPRETEiJ_G0020717	Trmt12	92	50.485	ENSSLDG00000025007	trmt12	96	50.485	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0020717	Trmt12	95	59.584	ENSSPUG00000005321	TRMT12	96	59.584	Sphenodon_punctatus
MGP_SPRETEiJ_G0020717	Trmt12	92	50.243	ENSSPAG00000009435	trmt12	93	50.243	Stegastes_partitus
MGP_SPRETEiJ_G0020717	Trmt12	95	56.000	ENSTGUG00000002280	TRMT12	99	56.941	Taeniopygia_guttata
MGP_SPRETEiJ_G0020717	Trmt12	96	48.492	ENSTRUG00000011548	trmt12	95	47.847	Takifugu_rubripes
MGP_SPRETEiJ_G0020717	Trmt12	97	47.696	ENSTNIG00000016866	trmt12	100	47.696	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0020717	Trmt12	97	78.851	ENSUAMG00000002067	TRMT12	99	78.851	Ursus_americanus
MGP_SPRETEiJ_G0020717	Trmt12	97	79.954	ENSVPAG00000006519	TRMT12	98	79.954	Vicugna_pacos
MGP_SPRETEiJ_G0020717	Trmt12	97	77.598	ENSVVUG00000016790	TRMT12	97	77.598	Vulpes_vulpes
MGP_SPRETEiJ_G0020717	Trmt12	96	56.776	ENSXETG00000009641	trmt12	96	56.776	Xenopus_tropicalis
MGP_SPRETEiJ_G0020717	Trmt12	95	46.462	ENSXCOG00000016505	trmt12	99	46.462	Xiphophorus_couchianus
MGP_SPRETEiJ_G0020717	Trmt12	92	48.910	ENSXMAG00000025318	trmt12	96	48.910	Xiphophorus_maculatus