EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0020797 (Gene tree)
Gene ID: -
Gene Symbol: Zc3h3
Alias: Smicl
Full Name: zinc finger CCCH type containing 3
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 87654 bases
Position: chr15:74983421-75071074
Accession: 2663721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0040329	zf-CCCH	PF00642.24	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0040329	-	3352	-	MGP_SPRETEiJ_P0040329	950 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0020797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0020797's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0020797	Zc3h3	100	70.471	ENSG00000014164	ZC3H3	100	70.471	Homo_sapiens
MGP_SPRETEiJ_G0020797	Zc3h3	64	41.622	ENSAPOG00000011522	zc3h3	92	34.611	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0020797	Zc3h3	63	42.529	ENSACIG00000005563	zc3h3	95	34.306	Amphilophus_citrinellus
MGP_SPRETEiJ_G0020797	Zc3h3	65	41.783	ENSAOCG00000013763	zc3h3	71	41.828	Amphiprion_ocellaris
MGP_SPRETEiJ_G0020797	Zc3h3	63	41.818	ENSAPEG00000020037	zc3h3	63	41.865	Amphiprion_percula
MGP_SPRETEiJ_G0020797	Zc3h3	86	34.078	ENSATEG00000003718	zc3h3	61	42.430	Anabas_testudineus
MGP_SPRETEiJ_G0020797	Zc3h3	100	70.355	ENSANAG00000018742	ZC3H3	100	70.877	Aotus_nancymaae
MGP_SPRETEiJ_G0020797	Zc3h3	63	43.678	ENSACLG00000023035	zc3h3	65	43.678	Astatotilapia_calliptera
MGP_SPRETEiJ_G0020797	Zc3h3	91	67.008	ENSBTAG00000021472	ZC3H3	99	67.008	Bos_taurus
MGP_SPRETEiJ_G0020797	Zc3h3	100	70.459	ENSCJAG00000021439	ZC3H3	100	70.428	Callithrix_jacchus
MGP_SPRETEiJ_G0020797	Zc3h3	87	65.731	ENSCAFG00000001299	ZC3H3	100	67.895	Canis_familiaris
MGP_SPRETEiJ_G0020797	Zc3h3	99	66.285	ENSCAFG00020018654	ZC3H3	100	67.430	Canis_lupus_dingo
MGP_SPRETEiJ_G0020797	Zc3h3	100	66.042	ENSCHIG00000018027	ZC3H3	100	65.625	Capra_hircus
MGP_SPRETEiJ_G0020797	Zc3h3	100	70.613	ENSTSYG00000034906	ZC3H3	100	71.220	Carlito_syrichta
MGP_SPRETEiJ_G0020797	Zc3h3	97	64.416	ENSCAPG00000013918	ZC3H3	100	65.591	Cavia_aperea
MGP_SPRETEiJ_G0020797	Zc3h3	100	70.742	ENSCPOG00000006248	ZC3H3	99	70.219	Cavia_porcellus
MGP_SPRETEiJ_G0020797	Zc3h3	100	71.099	ENSCCAG00000035267	ZC3H3	100	70.995	Cebus_capucinus
MGP_SPRETEiJ_G0020797	Zc3h3	100	70.324	ENSCATG00000020900	ZC3H3	100	70.366	Cercocebus_atys
MGP_SPRETEiJ_G0020797	Zc3h3	100	70.459	ENSCLAG00000009999	ZC3H3	99	69.520	Chinchilla_lanigera
MGP_SPRETEiJ_G0020797	Zc3h3	100	69.801	ENSCSAG00000009074	ZC3H3	99	70.052	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0020797	Zc3h3	100	44.248	ENSCPBG00000019050	ZC3H3	89	47.586	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0020797	Zc3h3	100	68.580	ENSCANG00000032420	ZC3H3	100	68.652	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0020797	Zc3h3	100	85.879	ENSCGRG00001016268	Zc3h3	100	85.774	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0020797	Zc3h3	100	85.879	ENSCGRG00000012889	Zc3h3	100	85.774	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0020797	Zc3h3	61	41.667	ENSCSEG00000002583	zc3h3	70	42.045	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0020797	Zc3h3	87	61.613	ENSDNOG00000031054	ZC3H3	96	63.223	Dasypus_novemcinctus
MGP_SPRETEiJ_G0020797	Zc3h3	98	66.419	ENSDORG00000023832	Zc3h3	100	67.201	Dipodomys_ordii
MGP_SPRETEiJ_G0020797	Zc3h3	71	54.305	ENSETEG00000014836	-	63	71.930	Echinops_telfairi
MGP_SPRETEiJ_G0020797	Zc3h3	100	68.313	ENSEASG00005009621	ZC3H3	99	68.557	Equus_asinus_asinus
MGP_SPRETEiJ_G0020797	Zc3h3	81	71.022	ENSECAG00000012556	ZC3H3	86	71.022	Equus_caballus
MGP_SPRETEiJ_G0020797	Zc3h3	92	59.631	ENSEEUG00000007986	ZC3H3	91	59.631	Erinaceus_europaeus
MGP_SPRETEiJ_G0020797	Zc3h3	100	69.543	ENSFCAG00000013238	ZC3H3	100	69.167	Felis_catus
MGP_SPRETEiJ_G0020797	Zc3h3	81	52.194	ENSFALG00000009538	ZC3H3	71	58.582	Ficedula_albicollis
MGP_SPRETEiJ_G0020797	Zc3h3	100	68.783	ENSFDAG00000017737	ZC3H3	99	68.757	Fukomys_damarensis
MGP_SPRETEiJ_G0020797	Zc3h3	71	41.573	ENSFHEG00000017714	zc3h3	63	44.015	Fundulus_heteroclitus
MGP_SPRETEiJ_G0020797	Zc3h3	99	70.074	ENSGGOG00000002833	ZC3H3	100	69.394	Gorilla_gorilla
MGP_SPRETEiJ_G0020797	Zc3h3	63	43.678	ENSHBUG00000004627	zc3h3	65	43.678	Haplochromis_burtoni
MGP_SPRETEiJ_G0020797	Zc3h3	100	70.093	ENSHGLG00000011234	ZC3H3	99	69.760	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0020797	Zc3h3	91	67.950	ENSHGLG00100006782	ZC3H3	97	67.950	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0020797	Zc3h3	71	40.952	ENSHCOG00000006579	zc3h3	54	48.092	Hippocampus_comes
MGP_SPRETEiJ_G0020797	Zc3h3	84	33.865	ENSIPUG00000006438	zc3h3	91	34.014	Ictalurus_punctatus
MGP_SPRETEiJ_G0020797	Zc3h3	100	71.102	ENSSTOG00000004358	ZC3H3	99	70.552	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0020797	Zc3h3	100	75.235	ENSJJAG00000023757	Zc3h3	100	75.026	Jaculus_jaculus
MGP_SPRETEiJ_G0020797	Zc3h3	77	40.529	ENSLOCG00000008621	ZC3H3	58	44.444	Lepisosteus_oculatus
MGP_SPRETEiJ_G0020797	Zc3h3	100	70.219	ENSMFAG00000036060	ZC3H3	100	70.471	Macaca_fascicularis
MGP_SPRETEiJ_G0020797	Zc3h3	100	69.874	ENSMNEG00000029433	ZC3H3	99	70.126	Macaca_nemestrina
MGP_SPRETEiJ_G0020797	Zc3h3	100	69.906	ENSMLEG00000038139	ZC3H3	100	70.157	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0020797	Zc3h3	52	42.967	ENSMAMG00000014787	zc3h3	52	43.702	Mastacembelus_armatus
MGP_SPRETEiJ_G0020797	Zc3h3	63	43.678	ENSMZEG00005017290	zc3h3	65	43.678	Maylandia_zebra
MGP_SPRETEiJ_G0020797	Zc3h3	100	85.864	ENSMAUG00000011009	Zc3h3	100	85.969	Mesocricetus_auratus
MGP_SPRETEiJ_G0020797	Zc3h3	100	71.444	ENSMICG00000001100	ZC3H3	100	70.890	Microcebus_murinus
MGP_SPRETEiJ_G0020797	Zc3h3	100	85.131	ENSMOCG00000000733	Zc3h3	100	85.026	Microtus_ochrogaster
MGP_SPRETEiJ_G0020797	Zc3h3	61	39.000	ENSMMOG00000016823	zc3h3	92	33.720	Mola_mola
MGP_SPRETEiJ_G0020797	Zc3h3	85	59.538	ENSMODG00000011385	ZC3H3	94	58.531	Monodelphis_domestica
MGP_SPRETEiJ_G0020797	Zc3h3	68	40.148	ENSMALG00000014610	zc3h3	52	45.019	Monopterus_albus
MGP_SPRETEiJ_G0020797	Zc3h3	100	97.053	MGP_CAROLIEiJ_G0019897	Zc3h3	100	97.053	Mus_caroli
MGP_SPRETEiJ_G0020797	Zc3h3	100	99.158	ENSMUSG00000075600	Zc3h3	100	99.158	Mus_musculus
MGP_SPRETEiJ_G0020797	Zc3h3	100	95.720	MGP_PahariEiJ_G0019905	Zc3h3	100	95.720	Mus_pahari
MGP_SPRETEiJ_G0020797	Zc3h3	91	68.512	ENSMPUG00000008357	ZC3H3	97	68.298	Mustela_putorius_furo
MGP_SPRETEiJ_G0020797	Zc3h3	100	80.564	ENSNGAG00000008574	Zc3h3	100	80.669	Nannospalax_galili
MGP_SPRETEiJ_G0020797	Zc3h3	63	43.678	ENSNBRG00000005454	zc3h3	87	35.629	Neolamprologus_brichardi
MGP_SPRETEiJ_G0020797	Zc3h3	100	67.537	ENSNLEG00000001681	ZC3H3	100	67.641	Nomascus_leucogenys
MGP_SPRETEiJ_G0020797	Zc3h3	84	58.148	ENSMEUG00000008554	ZC3H3	86	58.148	Notamacropus_eugenii
MGP_SPRETEiJ_G0020797	Zc3h3	100	69.552	ENSODEG00000014239	ZC3H3	100	69.167	Octodon_degus
MGP_SPRETEiJ_G0020797	Zc3h3	94	48.092	ENSOANG00000003534	-	91	51.025	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0020797	Zc3h3	53	43.833	ENSORLG00000026930	zc3h3	92	36.247	Oryzias_latipes
MGP_SPRETEiJ_G0020797	Zc3h3	61	43.619	ENSORLG00020002734	zc3h3	92	35.480	Oryzias_latipes_hni
MGP_SPRETEiJ_G0020797	Zc3h3	60	43.774	ENSORLG00015001257	zc3h3	72	43.922	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0020797	Zc3h3	100	69.488	ENSOGAG00000014907	ZC3H3	100	69.424	Otolemur_garnettii
MGP_SPRETEiJ_G0020797	Zc3h3	100	64.943	ENSOARG00000000808	ZC3H3	100	65.083	Ovis_aries
MGP_SPRETEiJ_G0020797	Zc3h3	100	70.282	ENSPPAG00000035455	ZC3H3	87	69.697	Pan_paniscus
MGP_SPRETEiJ_G0020797	Zc3h3	100	69.271	ENSPPRG00000011707	ZC3H3	100	69.167	Panthera_pardus
MGP_SPRETEiJ_G0020797	Zc3h3	100	70.282	ENSPTRG00000020655	ZC3H3	100	69.948	Pan_troglodytes
MGP_SPRETEiJ_G0020797	Zc3h3	100	69.801	ENSPANG00000016578	ZC3H3	100	69.948	Papio_anubis
MGP_SPRETEiJ_G0020797	Zc3h3	63	44.660	ENSPKIG00000002936	zc3h3	61	49.361	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0020797	Zc3h3	100	85.969	ENSPEMG00000013893	Zc3h3	100	86.387	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0020797	Zc3h3	72	40.809	ENSPFOG00000023405	zc3h3	65	43.021	Poecilia_formosa
MGP_SPRETEiJ_G0020797	Zc3h3	72	40.641	ENSPLAG00000001686	zc3h3	66	42.830	Poecilia_latipinna
MGP_SPRETEiJ_G0020797	Zc3h3	72	41.147	ENSPMEG00000002341	zc3h3	66	43.403	Poecilia_mexicana
MGP_SPRETEiJ_G0020797	Zc3h3	72	41.147	ENSPREG00000008923	zc3h3	66	43.403	Poecilia_reticulata
MGP_SPRETEiJ_G0020797	Zc3h3	100	70.084	ENSPPYG00000018935	ZC3H3	99	70.366	Pongo_abelii
MGP_SPRETEiJ_G0020797	Zc3h3	100	72.756	ENSPCOG00000028174	ZC3H3	100	72.832	Propithecus_coquereli
MGP_SPRETEiJ_G0020797	Zc3h3	88	71.077	ENSPVAG00000005979	ZC3H3	88	70.769	Pteropus_vampyrus
MGP_SPRETEiJ_G0020797	Zc3h3	63	43.678	ENSPNYG00000023105	zc3h3	65	43.678	Pundamilia_nyererei
MGP_SPRETEiJ_G0020797	Zc3h3	57	40.345	ENSPNAG00000009850	zc3h3	61	39.771	Pygocentrus_nattereri
MGP_SPRETEiJ_G0020797	Zc3h3	100	69.729	ENSRBIG00000039855	ZC3H3	100	69.801	Rhinopithecus_bieti
MGP_SPRETEiJ_G0020797	Zc3h3	100	69.729	ENSRROG00000040493	ZC3H3	100	69.697	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0020797	Zc3h3	100	69.407	ENSSBOG00000021819	ZC3H3	100	70.115	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0020797	Zc3h3	64	41.860	ENSSMAG00000016302	zc3h3	55	46.682	Scophthalmus_maximus
MGP_SPRETEiJ_G0020797	Zc3h3	53	45.265	ENSSDUG00000021871	zc3h3	53	45.076	Seriola_dumerili
MGP_SPRETEiJ_G0020797	Zc3h3	62	44.886	ENSSLDG00000016166	zc3h3	62	44.697	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0020797	Zc3h3	61	42.692	ENSSPAG00000008518	zc3h3	62	42.500	Stegastes_partitus
MGP_SPRETEiJ_G0020797	Zc3h3	100	64.479	ENSSSCG00000006956	ZC3H3	99	64.692	Sus_scrofa
MGP_SPRETEiJ_G0020797	Zc3h3	65	58.240	ENSTBEG00000009096	-	74	58.400	Tupaia_belangeri
MGP_SPRETEiJ_G0020797	Zc3h3	91	69.735	ENSUAMG00000012919	ZC3H3	98	70.345	Ursus_americanus
MGP_SPRETEiJ_G0020797	Zc3h3	99	67.656	ENSVVUG00000022609	ZC3H3	98	68.432	Vulpes_vulpes
MGP_SPRETEiJ_G0020797	Zc3h3	63	50.478	ENSXETG00000004937	zc3h3	72	50.478	Xenopus_tropicalis
MGP_SPRETEiJ_G0020797	Zc3h3	57	40.174	ENSXCOG00000005025	zc3h3	71	40.104	Xiphophorus_couchianus
MGP_SPRETEiJ_G0020797	Zc3h3	64	43.353	ENSXMAG00000006422	zc3h3	66	43.353	Xiphophorus_maculatus