EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0020816 (Gene tree)
Gene ID: -
Gene Symbol: Plec
Alias: Plec1
Full Name: plectin
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 61745 bases
Position: chr15:75415681-75477425
Accession: 1277961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0040401	S10_plectin	PF03501.15	1.4e-35	1	1
MGP_SPRETEiJ_P0040396	S10_plectin	PF03501.15	3.7e-35	1	1
MGP_SPRETEiJ_P0040392	S10_plectin	PF03501.15	3.7e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0040391	-	14920	-	MGP_SPRETEiJ_P0040391	4521 (aa)	-	-
MGP_SPRETEiJ_T0040390	-	14975	-	MGP_SPRETEiJ_P0040390	4589 (aa)	-	-
MGP_SPRETEiJ_T0040393	-	15021	-	MGP_SPRETEiJ_P0040393	4548 (aa)	-	-
MGP_SPRETEiJ_T0040392	-	15458	-	MGP_SPRETEiJ_P0040392	4691 (aa)	-	-
MGP_SPRETEiJ_T0040395	-	14947	-	MGP_SPRETEiJ_P0040395	4550 (aa)	-	-
MGP_SPRETEiJ_T0040394	-	14858	-	MGP_SPRETEiJ_P0040394	4534 (aa)	-	-
MGP_SPRETEiJ_T0040397	-	15004	-	MGP_SPRETEiJ_P0040397	4543 (aa)	-	-
MGP_SPRETEiJ_T0040396	-	15442	-	MGP_SPRETEiJ_P0040396	4686 (aa)	-	-
MGP_SPRETEiJ_T0040399	-	15004	-	MGP_SPRETEiJ_P0040399	4543 (aa)	-	-
MGP_SPRETEiJ_T0040398	-	14856	-	MGP_SPRETEiJ_P0040398	4511 (aa)	-	-
MGP_SPRETEiJ_T0040389	-	14872	-	MGP_SPRETEiJ_P0040389	4555 (aa)	-	-
MGP_SPRETEiJ_T0040405	-	2078	-	MGP_SPRETEiJ_P0040405	676 (aa)	-	-
MGP_SPRETEiJ_T0040404	-	2099	-	MGP_SPRETEiJ_P0040404	499 (aa)	-	UPI0001F78E01
MGP_SPRETEiJ_T0040407	-	254	-	MGP_SPRETEiJ_P0040407	43 (aa)	-	UPI00001822FF
MGP_SPRETEiJ_T0040406	-	316	-	MGP_SPRETEiJ_P0040406	53 (aa)	-	UPI0003F485DE
MGP_SPRETEiJ_T0040401	-	3075	-	MGP_SPRETEiJ_P0040401	964 (aa)	-	-
MGP_SPRETEiJ_T0040400	-	4937	-	MGP_SPRETEiJ_P0040400	1645 (aa)	-	-
MGP_SPRETEiJ_T0040403	-	2219	-	MGP_SPRETEiJ_P0040403	702 (aa)	-	-
MGP_SPRETEiJ_T0040402	-	2158	-	MGP_SPRETEiJ_P0040402	661 (aa)	-	UPI000016C904
MGP_SPRETEiJ_T0040408	-	691	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0020816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0020816's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0020816	Plec	100	93.539	ENSG00000178209	PLEC	100	100.000	Homo_sapiens
MGP_SPRETEiJ_G0020816	Plec	100	93.048	ENSANAG00000032431	PLEC	100	93.048	Aotus_nancymaae
MGP_SPRETEiJ_G0020816	Plec	100	92.575	ENSBTAG00000011922	PLEC	100	92.575	Bos_taurus
MGP_SPRETEiJ_G0020816	Plec	100	93.346	ENSCJAG00000021472	PLEC	100	93.346	Callithrix_jacchus
MGP_SPRETEiJ_G0020816	Plec	100	92.455	ENSCAFG00000001433	PLEC	100	92.455	Canis_familiaris
MGP_SPRETEiJ_G0020816	Plec	88	92.471	ENSCHIG00000022260	PLEC	99	92.471	Capra_hircus
MGP_SPRETEiJ_G0020816	Plec	100	94.030	ENSTSYG00000033419	PLEC	100	94.030	Carlito_syrichta
MGP_SPRETEiJ_G0020816	Plec	100	91.701	ENSCAPG00000013570	PLEC	100	92.805	Cavia_aperea
MGP_SPRETEiJ_G0020816	Plec	100	94.917	ENSCPOG00000007957	PLEC	100	94.650	Cavia_porcellus
MGP_SPRETEiJ_G0020816	Plec	100	93.325	ENSCCAG00000031237	PLEC	100	93.325	Cebus_capucinus
MGP_SPRETEiJ_G0020816	Plec	100	93.945	ENSCATG00000009349	PLEC	100	93.945	Cercocebus_atys
MGP_SPRETEiJ_G0020816	Plec	100	95.747	ENSCLAG00000012830	PLEC	100	94.714	Chinchilla_lanigera
MGP_SPRETEiJ_G0020816	Plec	100	79.257	ENSCPBG00000021974	PLEC	99	72.741	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0020816	Plec	100	97.822	ENSCGRG00001019864	Plec	100	97.506	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0020816	Plec	100	96.737	ENSCGRG00000002714	Plec	100	96.737	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0020816	Plec	96	89.935	ENSDNOG00000031742	PLEC	99	89.935	Dasypus_novemcinctus
MGP_SPRETEiJ_G0020816	Plec	79	93.694	ENSETEG00000015535	-	62	93.694	Echinops_telfairi
MGP_SPRETEiJ_G0020816	Plec	83	96.636	ENSEEUG00000004554	-	67	96.942	Erinaceus_europaeus
MGP_SPRETEiJ_G0020816	Plec	100	92.319	ENSFCAG00000042897	PLEC	100	92.319	Felis_catus
MGP_SPRETEiJ_G0020816	Plec	100	95.539	ENSFDAG00000011856	PLEC	100	94.437	Fukomys_damarensis
MGP_SPRETEiJ_G0020816	Plec	100	92.658	ENSGGOG00000012217	PLEC	100	92.091	Gorilla_gorilla
MGP_SPRETEiJ_G0020816	Plec	100	95.124	ENSHGLG00000012646	PLEC	100	94.367	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0020816	Plec	100	92.642	ENSHGLG00100011759	PLEC	100	83.421	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0020816	Plec	100	93.849	ENSSTOG00000023061	PLEC	100	93.849	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0020816	Plec	100	95.672	ENSJJAG00000012390	Plec	100	95.693	Jaculus_jaculus
MGP_SPRETEiJ_G0020816	Plec	100	93.923	ENSMFAG00000032066	PLEC	100	93.923	Macaca_fascicularis
MGP_SPRETEiJ_G0020816	Plec	100	92.658	ENSMMUG00000000388	PLEC	100	90.636	Macaca_mulatta
MGP_SPRETEiJ_G0020816	Plec	100	93.887	ENSMNEG00000011406	PLEC	100	93.881	Macaca_nemestrina
MGP_SPRETEiJ_G0020816	Plec	100	92.554	ENSMLEG00000033296	PLEC	100	93.568	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0020816	Plec	100	97.272	ENSMAUG00000001116	Plec	100	97.272	Mesocricetus_auratus
MGP_SPRETEiJ_G0020816	Plec	100	93.669	ENSMICG00000016160	PLEC	100	93.669	Microcebus_murinus
MGP_SPRETEiJ_G0020816	Plec	100	97.510	ENSMOCG00000000674	Plec	100	97.293	Microtus_ochrogaster
MGP_SPRETEiJ_G0020816	Plec	100	99.702	MGP_CAROLIEiJ_G0019913	Plec	100	99.702	Mus_caroli
MGP_SPRETEiJ_G0020816	Plec	100	99.896	ENSMUSG00000022565	Plec	100	99.896	Mus_musculus
MGP_SPRETEiJ_G0020816	Plec	100	99.481	MGP_PahariEiJ_G0019923	Plec	100	99.481	Mus_pahari
MGP_SPRETEiJ_G0020816	Plec	100	90.463	ENSMPUG00000007329	PLEC	100	90.548	Mustela_putorius_furo
MGP_SPRETEiJ_G0020816	Plec	100	97.095	ENSNGAG00000008931	Plec	100	96.590	Nannospalax_galili
MGP_SPRETEiJ_G0020816	Plec	98	92.743	ENSMEUG00000004499	-	70	92.743	Notamacropus_eugenii
MGP_SPRETEiJ_G0020816	Plec	91	91.958	ENSOPRG00000015206	PLEC	69	90.895	Ochotona_princeps
MGP_SPRETEiJ_G0020816	Plec	100	95.539	ENSODEG00000014671	PLEC	100	95.539	Octodon_degus
MGP_SPRETEiJ_G0020816	Plec	85	92.515	ENSOCUG00000023075	-	100	93.086	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0020816	Plec	100	77.515	ENSOARG00000015846	-	100	74.153	Ovis_aries
MGP_SPRETEiJ_G0020816	Plec	100	92.037	ENSPPAG00000042112	PLEC	100	88.977	Pan_paniscus
MGP_SPRETEiJ_G0020816	Plec	100	93.710	ENSPTRG00000020672	PLEC	100	93.710	Pan_troglodytes
MGP_SPRETEiJ_G0020816	Plec	100	93.667	ENSPANG00000023403	-	100	93.667	Papio_anubis
MGP_SPRETEiJ_G0020816	Plec	100	97.658	ENSPEMG00000011922	Plec	100	97.658	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0020816	Plec	100	87.461	ENSPCIG00000014981	PLEC	100	83.022	Phascolarctos_cinereus
MGP_SPRETEiJ_G0020816	Plec	100	93.710	ENSPCOG00000023279	PLEC	100	93.710	Propithecus_coquereli
MGP_SPRETEiJ_G0020816	Plec	100	92.266	ENSPVAG00000009376	PLEC	91	92.488	Pteropus_vampyrus
MGP_SPRETEiJ_G0020816	Plec	100	98.336	ENSRNOG00000023781	Plec	100	98.336	Rattus_norvegicus
MGP_SPRETEiJ_G0020816	Plec	100	92.427	ENSRBIG00000041068	PLEC	61	84.238	Rhinopithecus_bieti
MGP_SPRETEiJ_G0020816	Plec	100	93.798	ENSRROG00000015881	PLEC	100	93.798	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0020816	Plec	100	90.832	ENSSBOG00000025259	PLEC	100	90.832	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0020816	Plec	100	85.389	ENSSHAG00000009020	PLEC	99	80.434	Sarcophilus_harrisii
MGP_SPRETEiJ_G0020816	Plec	100	86.307	ENSTTRG00000010427	PLEC	95	90.134	Tursiops_truncatus
MGP_SPRETEiJ_G0020816	Plec	100	92.029	ENSVVUG00000010214	PLEC	100	92.029	Vulpes_vulpes