EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0020896 (Gene tree)
Gene ID: -
Gene Symbol: Nol12
Alias: C78541|Nop25
Full Name: nucleolar protein 12
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 8684 bases
Position: chr15:78371381-78380064
Accession: 2146285
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0040680	Nop25	PF09805.9	4.2e-17	1	1
MGP_SPRETEiJ_P0040679	Nop25	PF09805.9	4e-16	1	1
MGP_SPRETEiJ_P0040681	Nop25	PF09805.9	5.1e-16	1	1
MGP_SPRETEiJ_P0040683	Nop25	PF09805.9	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0040680	-	643	-	MGP_SPRETEiJ_P0040680	172 (aa)	-	-
MGP_SPRETEiJ_T0040683	-	675	-	MGP_SPRETEiJ_P0040683	83 (aa)	-	-
MGP_SPRETEiJ_T0040682	-	675	-	MGP_SPRETEiJ_P0040682	15 (aa)	-	UPI0001915540
MGP_SPRETEiJ_T0040681	-	739	-	MGP_SPRETEiJ_P0040681	193 (aa)	-	-
MGP_SPRETEiJ_T0040679	-	3718	-	MGP_SPRETEiJ_P0040679	216 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0020896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0020896's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0020896	Nol12	100	89.352	ENSG00000273899	NOL12	100	89.352	Homo_sapiens
MGP_SPRETEiJ_G0020896	Nol12	93	50.943	ENSAPOG00000006332	nol12	90	50.000	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0020896	Nol12	98	89.573	ENSAMEG00000010139	-	100	89.573	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0020896	Nol12	93	51.415	ENSACIG00000000239	nol12	90	50.000	Amphilophus_citrinellus
MGP_SPRETEiJ_G0020896	Nol12	93	50.472	ENSAOCG00000004207	nol12	90	49.057	Amphiprion_ocellaris
MGP_SPRETEiJ_G0020896	Nol12	93	50.000	ENSAPEG00000013488	nol12	90	48.585	Amphiprion_percula
MGP_SPRETEiJ_G0020896	Nol12	93	51.659	ENSATEG00000009548	nol12	89	50.237	Anabas_testudineus
MGP_SPRETEiJ_G0020896	Nol12	99	65.741	ENSACAG00000015549	-	99	65.741	Anolis_carolinensis
MGP_SPRETEiJ_G0020896	Nol12	100	87.500	ENSANAG00000025653	-	100	87.500	Aotus_nancymaae
MGP_SPRETEiJ_G0020896	Nol12	93	50.472	ENSACLG00000016476	nol12	90	49.057	Astatotilapia_calliptera
MGP_SPRETEiJ_G0020896	Nol12	72	68.548	ENSAMXG00000041317	nol12	90	54.460	Astyanax_mexicanus
MGP_SPRETEiJ_G0020896	Nol12	100	86.111	ENSBTAG00000051118	NOL12	100	88.426	Bos_taurus
MGP_SPRETEiJ_G0020896	Nol12	100	85.185	ENSCJAG00000012487	-	100	85.185	Callithrix_jacchus
MGP_SPRETEiJ_G0020896	Nol12	100	78.704	ENSCJAG00000005559	-	96	78.704	Callithrix_jacchus
MGP_SPRETEiJ_G0020896	Nol12	100	90.278	ENSCAFG00000028770	-	100	90.278	Canis_familiaris
MGP_SPRETEiJ_G0020896	Nol12	100	90.278	ENSCAFG00020003735	-	100	90.278	Canis_lupus_dingo
MGP_SPRETEiJ_G0020896	Nol12	100	88.426	ENSCHIG00000021736	-	100	88.426	Capra_hircus
MGP_SPRETEiJ_G0020896	Nol12	100	75.463	ENSTSYG00000036100	-	100	75.463	Carlito_syrichta
MGP_SPRETEiJ_G0020896	Nol12	100	75.463	ENSTSYG00000027029	-	100	75.463	Carlito_syrichta
MGP_SPRETEiJ_G0020896	Nol12	100	90.741	ENSTSYG00000008865	-	100	90.741	Carlito_syrichta
MGP_SPRETEiJ_G0020896	Nol12	100	86.574	ENSCPOG00000037340	-	100	86.574	Cavia_porcellus
MGP_SPRETEiJ_G0020896	Nol12	100	87.037	ENSCCAG00000033458	-	100	87.037	Cebus_capucinus
MGP_SPRETEiJ_G0020896	Nol12	100	82.870	ENSCCAG00000034277	-	100	82.870	Cebus_capucinus
MGP_SPRETEiJ_G0020896	Nol12	100	87.963	ENSCATG00000038470	-	100	87.963	Cercocebus_atys
MGP_SPRETEiJ_G0020896	Nol12	100	87.500	ENSCLAG00000016784	-	100	87.500	Chinchilla_lanigera
MGP_SPRETEiJ_G0020896	Nol12	100	86.574	ENSCSAG00000007256	-	100	86.574	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0020896	Nol12	99	62.500	ENSCPBG00000023060	-	99	64.352	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0020896	Nol12	100	88.426	ENSCANG00000027973	-	100	88.426	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0020896	Nol12	100	96.296	ENSCGRG00001016078	Nol12	100	96.296	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0020896	Nol12	100	96.296	ENSCGRG00000007664	Nol12	100	96.296	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0020896	Nol12	75	49.697	ENSCSEG00000007082	nol12	69	47.273	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0020896	Nol12	93	49.057	ENSCVAG00000004424	nol12	90	46.698	Cyprinodon_variegatus
MGP_SPRETEiJ_G0020896	Nol12	60	72.816	ENSDARG00000038027	nol12	74	56.742	Danio_rerio
MGP_SPRETEiJ_G0020896	Nol12	100	69.863	ENSDNOG00000007681	-	95	67.982	Dasypus_novemcinctus
MGP_SPRETEiJ_G0020896	Nol12	98	74.408	ENSETEG00000008089	-	98	74.408	Echinops_telfairi
MGP_SPRETEiJ_G0020896	Nol12	73	42.063	ENSEBUG00000008264	nol12	70	36.810	Eptatretus_burgeri
MGP_SPRETEiJ_G0020896	Nol12	100	89.401	ENSEASG00005018821	-	100	89.401	Equus_asinus_asinus
MGP_SPRETEiJ_G0020896	Nol12	100	89.401	ENSECAG00000032748	NOL12	100	89.401	Equus_caballus
MGP_SPRETEiJ_G0020896	Nol12	100	86.111	ENSEEUG00000002597	-	100	86.111	Erinaceus_europaeus
MGP_SPRETEiJ_G0020896	Nol12	94	50.679	ENSELUG00000008885	nol12	89	50.679	Esox_lucius
MGP_SPRETEiJ_G0020896	Nol12	93	88.060	ENSFCAG00000038953	-	100	88.426	Felis_catus
MGP_SPRETEiJ_G0020896	Nol12	93	62.621	ENSFALG00000012807	-	86	62.927	Ficedula_albicollis
MGP_SPRETEiJ_G0020896	Nol12	100	84.259	ENSFDAG00000000919	-	100	86.574	Fukomys_damarensis
MGP_SPRETEiJ_G0020896	Nol12	93	50.000	ENSFHEG00000005900	nol12	90	49.765	Fundulus_heteroclitus
MGP_SPRETEiJ_G0020896	Nol12	93	46.411	ENSGMOG00000006313	nol12	89	43.541	Gadus_morhua
MGP_SPRETEiJ_G0020896	Nol12	88	64.062	ENSGALG00000012410	-	97	63.850	Gallus_gallus
MGP_SPRETEiJ_G0020896	Nol12	93	47.619	ENSGAFG00000017520	nol12	89	46.919	Gambusia_affinis
MGP_SPRETEiJ_G0020896	Nol12	93	46.445	ENSGACG00000007246	nol12	89	45.024	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0020896	Nol12	99	61.574	ENSGAGG00000017727	-	99	63.426	Gopherus_agassizii
MGP_SPRETEiJ_G0020896	Nol12	100	89.815	ENSGGOG00000040937	-	100	89.815	Gorilla_gorilla
MGP_SPRETEiJ_G0020896	Nol12	93	50.472	ENSHBUG00000021873	nol12	90	49.057	Haplochromis_burtoni
MGP_SPRETEiJ_G0020896	Nol12	100	83.333	ENSHGLG00000015482	-	100	85.648	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0020896	Nol12	100	83.333	ENSHGLG00100003937	-	100	85.648	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0020896	Nol12	96	47.297	ENSHCOG00000005941	nol12	93	47.297	Hippocampus_comes
MGP_SPRETEiJ_G0020896	Nol12	92	53.846	ENSIPUG00000000672	nol12	88	53.846	Ictalurus_punctatus
MGP_SPRETEiJ_G0020896	Nol12	100	90.783	ENSSTOG00000028960	-	100	90.783	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0020896	Nol12	93	52.381	ENSKMAG00000014033	nol12	91	50.952	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0020896	Nol12	98	52.804	ENSLACG00000005267	-	97	54.505	Latimeria_chalumnae
MGP_SPRETEiJ_G0020896	Nol12	100	88.889	ENSLAFG00000010072	-	100	88.889	Loxodonta_africana
MGP_SPRETEiJ_G0020896	Nol12	100	88.426	ENSMFAG00000006832	-	100	88.426	Macaca_fascicularis
MGP_SPRETEiJ_G0020896	Nol12	100	88.426	ENSMMUG00000047489	NOL12	100	88.426	Macaca_mulatta
MGP_SPRETEiJ_G0020896	Nol12	100	88.426	ENSMNEG00000016463	-	100	88.426	Macaca_nemestrina
MGP_SPRETEiJ_G0020896	Nol12	93	50.235	ENSMAMG00000008197	nol12	90	48.826	Mastacembelus_armatus
MGP_SPRETEiJ_G0020896	Nol12	93	50.472	ENSMZEG00005005326	nol12	90	49.057	Maylandia_zebra
MGP_SPRETEiJ_G0020896	Nol12	81	66.667	ENSMGAG00000012548	-	97	64.953	Meleagris_gallopavo
MGP_SPRETEiJ_G0020896	Nol12	100	95.833	ENSMAUG00000020440	Nol12	100	95.833	Mesocricetus_auratus
MGP_SPRETEiJ_G0020896	Nol12	100	89.352	ENSMICG00000033461	-	100	89.352	Microcebus_murinus
MGP_SPRETEiJ_G0020896	Nol12	100	93.056	ENSMOCG00000021388	Nol12	100	93.056	Microtus_ochrogaster
MGP_SPRETEiJ_G0020896	Nol12	93	49.528	ENSMMOG00000005012	nol12	90	47.170	Mola_mola
MGP_SPRETEiJ_G0020896	Nol12	96	62.212	ENSMODG00000000273	-	96	62.212	Monodelphis_domestica
MGP_SPRETEiJ_G0020896	Nol12	99	48.661	ENSMALG00000001721	nol12	94	47.321	Monopterus_albus
MGP_SPRETEiJ_G0020896	Nol12	100	99.078	MGP_CAROLIEiJ_G0019998	Nol12	100	99.078	Mus_caroli
MGP_SPRETEiJ_G0020896	Nol12	100	99.078	ENSMUSG00000033099	Nol12	100	99.078	Mus_musculus
MGP_SPRETEiJ_G0020896	Nol12	100	99.537	MGP_PahariEiJ_G0020000	Nol12	100	99.537	Mus_pahari
MGP_SPRETEiJ_G0020896	Nol12	100	87.037	ENSMPUG00000012830	-	100	87.037	Mustela_putorius_furo
MGP_SPRETEiJ_G0020896	Nol12	100	90.741	ENSMLUG00000014280	-	100	90.741	Myotis_lucifugus
MGP_SPRETEiJ_G0020896	Nol12	98	48.879	ENSNBRG00000002104	nol12	91	48.585	Neolamprologus_brichardi
MGP_SPRETEiJ_G0020896	Nol12	100	71.296	ENSNLEG00000014859	-	100	68.056	Nomascus_leucogenys
MGP_SPRETEiJ_G0020896	Nol12	87	69.110	ENSMEUG00000000228	-	99	69.110	Notamacropus_eugenii
MGP_SPRETEiJ_G0020896	Nol12	83	83.099	ENSOPRG00000013360	-	100	85.000	Ochotona_princeps
MGP_SPRETEiJ_G0020896	Nol12	89	85.417	ENSODEG00000000101	-	99	85.417	Octodon_degus
MGP_SPRETEiJ_G0020896	Nol12	93	50.943	ENSONIG00000008373	nol12	91	49.528	Oreochromis_niloticus
MGP_SPRETEiJ_G0020896	Nol12	88	73.545	ENSOANG00000005801	-	100	73.545	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0020896	Nol12	100	86.574	ENSOCUG00000017013	-	100	86.574	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0020896	Nol12	93	48.571	ENSORLG00000014684	nol12	89	50.237	Oryzias_latipes
MGP_SPRETEiJ_G0020896	Nol12	93	49.763	ENSORLG00020006235	nol12	89	51.185	Oryzias_latipes_hni
MGP_SPRETEiJ_G0020896	Nol12	93	48.815	ENSORLG00015018366	nol12	89	50.472	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0020896	Nol12	98	48.214	ENSOMEG00000006905	nol12	90	50.233	Oryzias_melastigma
MGP_SPRETEiJ_G0020896	Nol12	100	87.671	ENSOGAG00000008255	-	100	88.128	Otolemur_garnettii
MGP_SPRETEiJ_G0020896	Nol12	100	87.963	ENSOARG00000013969	-	100	87.963	Ovis_aries
MGP_SPRETEiJ_G0020896	Nol12	100	89.352	ENSPPAG00000032357	-	100	89.352	Pan_paniscus
MGP_SPRETEiJ_G0020896	Nol12	100	89.815	ENSPPRG00000024913	-	100	89.815	Panthera_pardus
MGP_SPRETEiJ_G0020896	Nol12	100	89.815	ENSPTIG00000012596	-	100	89.815	Panthera_tigris_altaica
MGP_SPRETEiJ_G0020896	Nol12	100	88.889	ENSPTRG00000014345	NOL12	100	88.889	Pan_troglodytes
MGP_SPRETEiJ_G0020896	Nol12	100	87.037	ENSPANG00000033918	-	100	87.037	Papio_anubis
MGP_SPRETEiJ_G0020896	Nol12	93	49.302	ENSPKIG00000007375	nol12	99	48.899	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0020896	Nol12	89	68.718	ENSPSIG00000012103	-	98	65.278	Pelodiscus_sinensis
MGP_SPRETEiJ_G0020896	Nol12	55	68.041	ENSPMGG00000009583	nol12	83	52.083	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0020896	Nol12	100	95.872	ENSPEMG00000010657	Nol12	100	95.872	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0020896	Nol12	93	47.273	ENSPFOG00000022176	nol12	89	46.789	Poecilia_formosa
MGP_SPRETEiJ_G0020896	Nol12	93	49.537	ENSPLAG00000023807	nol12	89	47.907	Poecilia_latipinna
MGP_SPRETEiJ_G0020896	Nol12	93	48.148	ENSPMEG00000018335	nol12	90	46.977	Poecilia_mexicana
MGP_SPRETEiJ_G0020896	Nol12	100	86.111	ENSPCAG00000000561	-	100	86.111	Procavia_capensis
MGP_SPRETEiJ_G0020896	Nol12	100	90.278	ENSPCOG00000014514	-	100	90.278	Propithecus_coquereli
MGP_SPRETEiJ_G0020896	Nol12	100	89.352	ENSPVAG00000010097	-	100	89.352	Pteropus_vampyrus
MGP_SPRETEiJ_G0020896	Nol12	93	50.472	ENSPNYG00000020267	nol12	90	49.057	Pundamilia_nyererei
MGP_SPRETEiJ_G0020896	Nol12	60	74.757	ENSPNAG00000023112	nol12	68	61.111	Pygocentrus_nattereri
MGP_SPRETEiJ_G0020896	Nol12	100	97.222	ENSRNOG00000010209	Nol12	100	97.222	Rattus_norvegicus
MGP_SPRETEiJ_G0020896	Nol12	100	89.352	ENSRBIG00000042117	-	100	89.352	Rhinopithecus_bieti
MGP_SPRETEiJ_G0020896	Nol12	100	88.889	ENSRROG00000037912	-	100	88.889	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0020896	Nol12	100	85.648	ENSSBOG00000036236	-	100	85.648	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0020896	Nol12	94	50.000	ENSSFOG00015012468	nol12	100	48.927	Scleropages_formosus
MGP_SPRETEiJ_G0020896	Nol12	91	45.783	ENSSMAG00000004745	nol12	69	50.000	Scophthalmus_maximus
MGP_SPRETEiJ_G0020896	Nol12	93	49.057	ENSSDUG00000016769	nol12	89	49.057	Seriola_dumerili
MGP_SPRETEiJ_G0020896	Nol12	93	49.763	ENSSLDG00000024826	nol12	89	47.867	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0020896	Nol12	99	65.421	ENSSPUG00000011564	-	99	65.421	Sphenodon_punctatus
MGP_SPRETEiJ_G0020896	Nol12	94	50.000	ENSSPAG00000007292	nol12	91	49.770	Stegastes_partitus
MGP_SPRETEiJ_G0020896	Nol12	100	89.352	ENSSSCG00000021663	-	100	89.352	Sus_scrofa
MGP_SPRETEiJ_G0020896	Nol12	97	66.197	ENSTGUG00000010526	NOL12	95	66.667	Taeniopygia_guttata
MGP_SPRETEiJ_G0020896	Nol12	85	50.993	ENSTRUG00000019689	nol12	97	45.575	Takifugu_rubripes
MGP_SPRETEiJ_G0020896	Nol12	97	48.636	ENSTNIG00000010836	nol12	89	48.869	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0020896	Nol12	100	79.167	ENSTBEG00000009745	-	100	79.167	Tupaia_belangeri
MGP_SPRETEiJ_G0020896	Nol12	96	79.808	ENSTTRG00000004799	-	100	79.808	Tursiops_truncatus
MGP_SPRETEiJ_G0020896	Nol12	100	90.741	ENSUAMG00000020483	-	100	90.741	Ursus_americanus
MGP_SPRETEiJ_G0020896	Nol12	100	90.278	ENSUMAG00000015210	-	100	90.278	Ursus_maritimus
MGP_SPRETEiJ_G0020896	Nol12	100	89.815	ENSVVUG00000023997	-	100	89.815	Vulpes_vulpes
MGP_SPRETEiJ_G0020896	Nol12	99	47.465	ENSXETG00000015984	nol12	99	48.387	Xenopus_tropicalis
MGP_SPRETEiJ_G0020896	Nol12	93	48.815	ENSXCOG00000015936	nol12	89	46.226	Xiphophorus_couchianus
MGP_SPRETEiJ_G0020896	Nol12	93	49.289	ENSXMAG00000006120	nol12	89	46.698	Xiphophorus_maculatus