EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0020940 (Gene tree)
Gene ID: -
Gene Symbol: Fam83f
Alias: -
Full Name: family with sequence similarity 83%2C member F
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 28659 bases
Position: chr15:80241217-80269875
Accession: 2146227
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0040852	FAM83	PF07894.12	2.9e-107	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0040852	-	2987	-	MGP_SPRETEiJ_P0040852	495 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0020940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0020940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0020940	Fam83f	56	36.299	MGP_SPRETEiJ_G0020704	Fam83a	93	33.884
MGP_SPRETEiJ_G0020940	Fam83f	59	40.199	MGP_SPRETEiJ_G0030839	Fam83e	61	40.199

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0020940	Fam83f	100	79.167	ENSG00000133477	FAM83F	100	79.563	Homo_sapiens
MGP_SPRETEiJ_G0020940	Fam83f	71	80.398	ENSAMEG00000011020	FAM83F	99	80.398	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0020940	Fam83f	99	55.357	ENSAPLG00000009665	FAM83F	99	55.159	Anas_platyrhynchos
MGP_SPRETEiJ_G0020940	Fam83f	100	54.389	ENSACAG00000007387	FAM83F	100	54.008	Anolis_carolinensis
MGP_SPRETEiJ_G0020940	Fam83f	100	75.984	ENSANAG00000027381	FAM83F	100	75.787	Aotus_nancymaae
MGP_SPRETEiJ_G0020940	Fam83f	100	77.407	ENSBTAG00000014247	FAM83F	100	78.389	Bos_taurus
MGP_SPRETEiJ_G0020940	Fam83f	100	76.378	ENSCJAG00000002721	FAM83F	100	75.197	Callithrix_jacchus
MGP_SPRETEiJ_G0020940	Fam83f	70	78.063	ENSCAFG00000001288	FAM83F	100	78.063	Canis_familiaris
MGP_SPRETEiJ_G0020940	Fam83f	98	78.788	ENSCAFG00020002339	FAM83F	96	78.990	Canis_lupus_dingo
MGP_SPRETEiJ_G0020940	Fam83f	100	77.515	ENSCHIG00000026060	FAM83F	100	78.501	Capra_hircus
MGP_SPRETEiJ_G0020940	Fam83f	99	78.758	ENSTSYG00000028609	FAM83F	100	79.359	Carlito_syrichta
MGP_SPRETEiJ_G0020940	Fam83f	80	76.750	ENSCAPG00000004680	FAM83F	100	76.750	Cavia_aperea
MGP_SPRETEiJ_G0020940	Fam83f	100	76.634	ENSCPOG00000014133	FAM83F	100	76.238	Cavia_porcellus
MGP_SPRETEiJ_G0020940	Fam83f	100	76.726	ENSCCAG00000026740	FAM83F	100	76.529	Cebus_capucinus
MGP_SPRETEiJ_G0020940	Fam83f	100	78.571	ENSCATG00000035519	FAM83F	100	78.968	Cercocebus_atys
MGP_SPRETEiJ_G0020940	Fam83f	100	78.416	ENSCLAG00000016721	FAM83F	100	78.218	Chinchilla_lanigera
MGP_SPRETEiJ_G0020940	Fam83f	100	78.770	ENSCSAG00000006058	FAM83F	100	79.167	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0020940	Fam83f	81	76.733	ENSCHOG00000010532	FAM83F	95	78.372	Choloepus_hoffmanni
MGP_SPRETEiJ_G0020940	Fam83f	93	58.333	ENSCPBG00000022941	FAM83F	92	57.906	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0020940	Fam83f	90	77.143	ENSCANG00000030851	FAM83F	100	77.976	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0020940	Fam83f	100	87.751	ENSCGRG00001018899	Fam83f	100	87.349	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0020940	Fam83f	76	87.071	ENSCGRG00000016702	Fam83f	100	86.544	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0020940	Fam83f	100	75.547	ENSDNOG00000046641	FAM83F	100	76.342	Dasypus_novemcinctus
MGP_SPRETEiJ_G0020940	Fam83f	89	78.971	ENSDORG00000013192	Fam83f	96	79.418	Dipodomys_ordii
MGP_SPRETEiJ_G0020940	Fam83f	98	70.505	ENSETEG00000016860	FAM83F	100	71.515	Echinops_telfairi
MGP_SPRETEiJ_G0020940	Fam83f	99	81.511	ENSEASG00005005338	FAM83F	99	80.915	Equus_asinus_asinus
MGP_SPRETEiJ_G0020940	Fam83f	100	80.943	ENSECAG00000009129	FAM83F	100	81.729	Equus_caballus
MGP_SPRETEiJ_G0020940	Fam83f	57	70.526	ENSEEUG00000001255	-	100	70.526	Erinaceus_europaeus
MGP_SPRETEiJ_G0020940	Fam83f	100	78.641	ENSFCAG00000013509	FAM83F	100	79.806	Felis_catus
MGP_SPRETEiJ_G0020940	Fam83f	93	59.023	ENSFALG00000012211	FAM83F	100	54.685	Ficedula_albicollis
MGP_SPRETEiJ_G0020940	Fam83f	68	78.488	ENSFDAG00000006165	FAM83F	100	79.360	Fukomys_damarensis
MGP_SPRETEiJ_G0020940	Fam83f	100	54.476	ENSGALG00000045936	FAM83F	81	54.095	Gallus_gallus
MGP_SPRETEiJ_G0020940	Fam83f	93	59.494	ENSGAGG00000007869	FAM83F	98	58.861	Gopherus_agassizii
MGP_SPRETEiJ_G0020940	Fam83f	100	79.365	ENSGGOG00000006871	FAM83F	100	79.762	Gorilla_gorilla
MGP_SPRETEiJ_G0020940	Fam83f	100	80.396	ENSHGLG00000017812	FAM83F	100	80.990	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0020940	Fam83f	95	80.000	ENSHGLG00100004088	FAM83F	99	80.625	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0020940	Fam83f	81	77.805	ENSSTOG00000023057	FAM83F	86	79.250	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0020940	Fam83f	98	85.331	ENSJJAG00000011999	Fam83f	99	85.331	Jaculus_jaculus
MGP_SPRETEiJ_G0020940	Fam83f	61	46.278	ENSLACG00000011004	FAM83F	100	46.057	Latimeria_chalumnae
MGP_SPRETEiJ_G0020940	Fam83f	85	77.752	ENSLAFG00000016675	FAM83F	100	78.140	Loxodonta_africana
MGP_SPRETEiJ_G0020940	Fam83f	100	78.770	ENSMFAG00000002020	FAM83F	100	79.167	Macaca_fascicularis
MGP_SPRETEiJ_G0020940	Fam83f	100	78.770	ENSMMUG00000017166	FAM83F	100	79.167	Macaca_mulatta
MGP_SPRETEiJ_G0020940	Fam83f	100	78.571	ENSMNEG00000033076	FAM83F	100	78.968	Macaca_nemestrina
MGP_SPRETEiJ_G0020940	Fam83f	82	80.590	ENSMLEG00000034781	FAM83F	99	80.590	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0020940	Fam83f	99	55.976	ENSMGAG00000012348	FAM83F	98	55.378	Meleagris_gallopavo
MGP_SPRETEiJ_G0020940	Fam83f	100	86.427	ENSMAUG00000015744	Fam83f	100	85.629	Mesocricetus_auratus
MGP_SPRETEiJ_G0020940	Fam83f	100	78.656	ENSMICG00000016129	FAM83F	100	78.656	Microcebus_murinus
MGP_SPRETEiJ_G0020940	Fam83f	100	82.129	ENSMOCG00000003997	Fam83f	100	81.928	Microtus_ochrogaster
MGP_SPRETEiJ_G0020940	Fam83f	69	61.003	ENSMODG00000008966	-	99	60.167	Monodelphis_domestica
MGP_SPRETEiJ_G0020940	Fam83f	100	97.778	MGP_CAROLIEiJ_G0020042	Fam83f	100	97.778	Mus_caroli
MGP_SPRETEiJ_G0020940	Fam83f	100	98.788	ENSMUSG00000022408	Fam83f	100	98.788	Mus_musculus
MGP_SPRETEiJ_G0020940	Fam83f	100	94.141	MGP_PahariEiJ_G0020044	Fam83f	100	93.939	Mus_pahari
MGP_SPRETEiJ_G0020940	Fam83f	98	80.202	ENSMLUG00000015534	FAM83F	99	80.202	Myotis_lucifugus
MGP_SPRETEiJ_G0020940	Fam83f	100	83.267	ENSNGAG00000020952	Fam83f	100	83.665	Nannospalax_galili
MGP_SPRETEiJ_G0020940	Fam83f	100	80.357	ENSNLEG00000015307	FAM83F	100	80.159	Nomascus_leucogenys
MGP_SPRETEiJ_G0020940	Fam83f	64	65.190	ENSMEUG00000004881	-	97	65.190	Notamacropus_eugenii
MGP_SPRETEiJ_G0020940	Fam83f	55	68.531	ENSOPRG00000000702	-	54	74.825	Ochotona_princeps
MGP_SPRETEiJ_G0020940	Fam83f	100	76.832	ENSODEG00000012376	FAM83F	100	76.832	Octodon_degus
MGP_SPRETEiJ_G0020940	Fam83f	88	74.550	ENSOCUG00000014060	FAM83F	99	75.225	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0020940	Fam83f	100	79.167	ENSOGAG00000030522	FAM83F	100	79.167	Otolemur_garnettii
MGP_SPRETEiJ_G0020940	Fam83f	81	76.866	ENSOARG00000017179	FAM83F	93	75.123	Ovis_aries
MGP_SPRETEiJ_G0020940	Fam83f	88	77.578	ENSPPAG00000027631	FAM83F	100	79.148	Pan_paniscus
MGP_SPRETEiJ_G0020940	Fam83f	100	79.688	ENSPPRG00000021618	FAM83F	100	80.859	Panthera_pardus
MGP_SPRETEiJ_G0020940	Fam83f	81	74.572	ENSPTIG00000021999	FAM83F	79	74.634	Panthera_tigris_altaica
MGP_SPRETEiJ_G0020940	Fam83f	100	79.563	ENSPTRG00000014405	FAM83F	100	79.960	Pan_troglodytes
MGP_SPRETEiJ_G0020940	Fam83f	100	78.373	ENSPANG00000016392	FAM83F	100	78.770	Papio_anubis
MGP_SPRETEiJ_G0020940	Fam83f	54	48.084	ENSPSIG00000010230	FAM83F	100	47.387	Pelodiscus_sinensis
MGP_SPRETEiJ_G0020940	Fam83f	100	85.542	ENSPEMG00000010602	Fam83f	100	85.341	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0020940	Fam83f	100	64.202	ENSPCIG00000020369	FAM83F	100	63.743	Phascolarctos_cinereus
MGP_SPRETEiJ_G0020940	Fam83f	100	79.167	ENSPPYG00000011847	FAM83F	100	79.762	Pongo_abelii
MGP_SPRETEiJ_G0020940	Fam83f	79	85.567	ENSPCAG00000008047	FAM83F	79	85.567	Procavia_capensis
MGP_SPRETEiJ_G0020940	Fam83f	100	80.671	ENSPCOG00000016351	FAM83F	100	80.276	Propithecus_coquereli
MGP_SPRETEiJ_G0020940	Fam83f	100	78.656	ENSPVAG00000004972	FAM83F	100	80.040	Pteropus_vampyrus
MGP_SPRETEiJ_G0020940	Fam83f	100	90.000	ENSRNOG00000018330	Fam83f	100	90.400	Rattus_norvegicus
MGP_SPRETEiJ_G0020940	Fam83f	100	78.968	ENSRBIG00000028821	FAM83F	100	79.365	Rhinopithecus_bieti
MGP_SPRETEiJ_G0020940	Fam83f	100	78.968	ENSRROG00000031286	FAM83F	100	79.365	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0020940	Fam83f	93	75.636	ENSSBOG00000024462	FAM83F	100	74.364	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0020940	Fam83f	66	61.862	ENSSHAG00000011148	-	99	62.462	Sarcophilus_harrisii
MGP_SPRETEiJ_G0020940	Fam83f	100	58.627	ENSSPUG00000010758	FAM83F	100	57.843	Sphenodon_punctatus
MGP_SPRETEiJ_G0020940	Fam83f	99	76.023	ENSSSCG00000000079	FAM83F	99	77.583	Sus_scrofa
MGP_SPRETEiJ_G0020940	Fam83f	93	59.660	ENSTGUG00000010169	FAM83F	100	58.811	Taeniopygia_guttata
MGP_SPRETEiJ_G0020940	Fam83f	100	75.148	ENSTBEG00000005578	FAM83F	100	76.134	Tupaia_belangeri
MGP_SPRETEiJ_G0020940	Fam83f	68	65.015	ENSTTRG00000011451	-	99	65.598	Tursiops_truncatus
MGP_SPRETEiJ_G0020940	Fam83f	100	75.686	ENSUAMG00000007221	FAM83F	100	76.471	Ursus_americanus