EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0020967 (Gene tree)
Gene ID: -
Gene Symbol: Xrcc6
Alias: G22p1|Ku p70|Ku70
Full Name: X-ray repair complementing defective repair in Chinese hamster cells 6
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 59886 bases
Position: chr15:81645128-81705013
Accession: 95606
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0040973	SAP	PF02037.27	1.3e-09	1	1
MGP_SPRETEiJ_P0040977	SAP	PF02037.27	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0040975	-	588	-	MGP_SPRETEiJ_P0040975	191 (aa)	-	-
MGP_SPRETEiJ_T0040966	-	764	-	MGP_SPRETEiJ_P0040966	102 (aa)	-	-
MGP_SPRETEiJ_T0040974	-	382	-	MGP_SPRETEiJ_P0040974	27 (aa)	-	UPI0001F793E3
MGP_SPRETEiJ_T0040977	-	1960	-	MGP_SPRETEiJ_P0040977	594 (aa)	-	-
MGP_SPRETEiJ_T0040976	-	799	-	MGP_SPRETEiJ_P0040976	104 (aa)	-	-
MGP_SPRETEiJ_T0040973	-	3177	-	MGP_SPRETEiJ_P0040973	583 (aa)	-	-
MGP_SPRETEiJ_T0040980	-	686	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0040981	-	390	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0040982	-	529	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0040979	-	775	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0040978	-	426	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0020967's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0020967's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.821	ENSG00000196419	XRCC6	97	83.272	Homo_sapiens
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.192	ENSAPOG00000012704	xrcc6	96	57.192	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.363	ENSACIG00000021277	xrcc6	96	57.363	Amphilophus_citrinellus
MGP_SPRETEiJ_G0020967	Xrcc6	99	56.432	ENSAOCG00000021344	xrcc6	95	56.432	Amphiprion_ocellaris
MGP_SPRETEiJ_G0020967	Xrcc6	99	56.604	ENSAPEG00000020712	xrcc6	95	56.604	Amphiprion_percula
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.461	ENSATEG00000007119	xrcc6	95	57.461	Anabas_testudineus
MGP_SPRETEiJ_G0020967	Xrcc6	95	68.941	ENSAPLG00000004469	XRCC6	100	68.941	Anas_platyrhynchos
MGP_SPRETEiJ_G0020967	Xrcc6	99	75.215	ENSANAG00000020017	-	97	75.000	Aotus_nancymaae
MGP_SPRETEiJ_G0020967	Xrcc6	99	72.633	ENSANAG00000035230	-	97	71.927	Aotus_nancymaae
MGP_SPRETEiJ_G0020967	Xrcc6	99	70.790	ENSANAG00000023445	-	97	69.358	Aotus_nancymaae
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.649	ENSANAG00000018684	XRCC6	99	82.752	Aotus_nancymaae
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.705	ENSACLG00000018608	xrcc6	96	57.705	Astatotilapia_calliptera
MGP_SPRETEiJ_G0020967	Xrcc6	99	59.247	ENSAMXG00000007545	xrcc6	96	59.247	Astyanax_mexicanus
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.993	ENSCJAG00000045512	XRCC6	97	83.272	Callithrix_jacchus
MGP_SPRETEiJ_G0020967	Xrcc6	99	84.021	ENSTSYG00000011348	XRCC6	97	83.303	Carlito_syrichta
MGP_SPRETEiJ_G0020967	Xrcc6	99	79.174	ENSCCAG00000030041	-	91	78.803	Cebus_capucinus
MGP_SPRETEiJ_G0020967	Xrcc6	99	69.191	ENSCCAG00000037663	-	95	68.430	Cebus_capucinus
MGP_SPRETEiJ_G0020967	Xrcc6	99	66.781	ENSCCAG00000035711	-	98	65.385	Cebus_capucinus
MGP_SPRETEiJ_G0020967	Xrcc6	90	87.629	ENSCCAG00000030468	-	97	86.614	Cebus_capucinus
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.477	ENSCATG00000042366	XRCC6	98	83.477	Cercocebus_atys
MGP_SPRETEiJ_G0020967	Xrcc6	100	84.734	ENSCLAG00000016669	XRCC6	97	84.211	Chinchilla_lanigera
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.477	ENSCSAG00000005784	XRCC6	96	83.219	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0020967	Xrcc6	99	73.540	ENSCPBG00000020535	XRCC6	95	73.540	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0020967	Xrcc6	99	33.560	ENSCING00000000633	-	96	33.560	Ciona_intestinalis
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.477	ENSCANG00000031032	XRCC6	98	82.601	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0020967	Xrcc6	100	83.019	ENSCGRG00001019029	Xrcc6	95	83.190	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0020967	Xrcc6	100	91.595	ENSCGRG00000001528	Xrcc6	96	91.595	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.192	ENSCSEG00000020434	xrcc6	96	57.192	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.705	ENSCVAG00000002189	xrcc6	96	57.705	Cyprinodon_variegatus
MGP_SPRETEiJ_G0020967	Xrcc6	99	59.455	ENSDARG00000071551	xrcc6	96	59.455	Danio_rerio
MGP_SPRETEiJ_G0020967	Xrcc6	77	91.892	ENSETEG00000015333	-	73	91.892	Echinops_telfairi
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.505	ENSEASG00005001514	XRCC6	96	83.533	Equus_asinus_asinus
MGP_SPRETEiJ_G0020967	Xrcc6	99	82.990	ENSECAG00000017563	XRCC6	100	82.801	Equus_caballus
MGP_SPRETEiJ_G0020967	Xrcc6	99	56.164	ENSELUG00000020301	xrcc6	96	56.164	Esox_lucius
MGP_SPRETEiJ_G0020967	Xrcc6	99	70.466	ENSFALG00000011908	XRCC6	93	69.847	Ficedula_albicollis
MGP_SPRETEiJ_G0020967	Xrcc6	99	58.966	ENSFHEG00000016833	xrcc6	95	58.966	Fundulus_heteroclitus
MGP_SPRETEiJ_G0020967	Xrcc6	88	56.690	ENSGMOG00000013524	xrcc6	84	56.690	Gadus_morhua
MGP_SPRETEiJ_G0020967	Xrcc6	99	68.503	ENSGALG00000011932	XRCC6	95	68.322	Gallus_gallus
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.192	ENSGAFG00000008130	xrcc6	96	57.192	Gambusia_affinis
MGP_SPRETEiJ_G0020967	Xrcc6	99	56.048	ENSGACG00000004868	xrcc6	95	56.048	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0020967	Xrcc6	99	72.337	ENSGAGG00000017518	XRCC6	95	72.337	Gopherus_agassizii
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.966	ENSGGOG00000015885	XRCC6	97	83.966	Gorilla_gorilla
MGP_SPRETEiJ_G0020967	Xrcc6	96	57.699	ENSHBUG00000023281	xrcc6	99	57.699	Haplochromis_burtoni
MGP_SPRETEiJ_G0020967	Xrcc6	100	83.019	ENSHGLG00000018078	XRCC6	96	83.019	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0020967	Xrcc6	100	83.019	ENSHGLG00100011264	XRCC6	96	83.019	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0020967	Xrcc6	99	54.031	ENSHCOG00000009821	xrcc6	96	54.031	Hippocampus_comes
MGP_SPRETEiJ_G0020967	Xrcc6	99	58.020	ENSIPUG00000000767	xrcc6	96	58.020	Ictalurus_punctatus
MGP_SPRETEiJ_G0020967	Xrcc6	100	87.307	ENSSTOG00000009490	XRCC6	97	86.757	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0020967	Xrcc6	100	79.760	ENSJJAG00000017136	Xrcc6	96	80.306	Jaculus_jaculus
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.192	ENSKMAG00000002141	xrcc6	96	57.192	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.705	ENSLBEG00000002691	xrcc6	95	57.705	Labrus_bergylta
MGP_SPRETEiJ_G0020967	Xrcc6	89	58.416	ENSLOCG00000011533	xrcc6	94	58.416	Lepisosteus_oculatus
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.477	ENSMFAG00000003352	XRCC6	98	82.752	Macaca_fascicularis
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.477	ENSMMUG00000001856	XRCC6	97	82.904	Macaca_mulatta
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.477	ENSMNEG00000035076	XRCC6	98	82.784	Macaca_nemestrina
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.477	ENSMLEG00000019869	XRCC6	97	82.904	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0020967	Xrcc6	99	56.581	ENSMAMG00000003368	xrcc6	96	56.581	Mastacembelus_armatus
MGP_SPRETEiJ_G0020967	Xrcc6	99	55.556	ENSMAMG00000003405	xrcc6	97	55.556	Mastacembelus_armatus
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.705	ENSMZEG00005028080	xrcc6	96	57.705	Maylandia_zebra
MGP_SPRETEiJ_G0020967	Xrcc6	99	68.158	ENSMGAG00000012146	XRCC6	95	67.863	Meleagris_gallopavo
MGP_SPRETEiJ_G0020967	Xrcc6	99	91.581	ENSMAUG00000017340	Xrcc6	96	91.581	Mesocricetus_auratus
MGP_SPRETEiJ_G0020967	Xrcc6	99	90.206	ENSMOCG00000015717	Xrcc6	96	90.206	Microtus_ochrogaster
MGP_SPRETEiJ_G0020967	Xrcc6	99	56.034	ENSMMOG00000003536	xrcc6	95	56.034	Mola_mola
MGP_SPRETEiJ_G0020967	Xrcc6	99	59.005	ENSMALG00000013912	xrcc6	92	58.673	Monopterus_albus
MGP_SPRETEiJ_G0020967	Xrcc6	100	92.110	MGP_CAROLIEiJ_G0020067	Xrcc6	96	92.110	Mus_caroli
MGP_SPRETEiJ_G0020967	Xrcc6	100	98.799	ENSMUSG00000022471	Xrcc6	100	98.106	Mus_musculus
MGP_SPRETEiJ_G0020967	Xrcc6	100	96.569	MGP_PahariEiJ_G0020069	Xrcc6	96	96.569	Mus_pahari
MGP_SPRETEiJ_G0020967	Xrcc6	100	88.336	ENSNGAG00000013750	Xrcc6	97	87.776	Nannospalax_galili
MGP_SPRETEiJ_G0020967	Xrcc6	99	58.148	ENSNBRG00000004125	xrcc6	95	58.148	Neolamprologus_brichardi
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.793	ENSOPRG00000002386	XRCC6	99	83.793	Ochotona_princeps
MGP_SPRETEiJ_G0020967	Xrcc6	100	82.504	ENSODEG00000015847	XRCC6	97	82.003	Octodon_degus
MGP_SPRETEiJ_G0020967	Xrcc6	99	58.048	ENSONIG00000019715	xrcc6	96	58.120	Oreochromis_niloticus
MGP_SPRETEiJ_G0020967	Xrcc6	71	77.108	ENSOANG00000011328	XRCC6	100	77.108	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0020967	Xrcc6	99	86.379	ENSOCUG00000006948	XRCC6	96	85.860	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.607	ENSORLG00020007820	xrcc6	96	57.607	Oryzias_latipes_hni
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.265	ENSORLG00015006406	xrcc6	96	57.265	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.192	ENSOMEG00000008998	xrcc6	96	57.265	Oryzias_melastigma
MGP_SPRETEiJ_G0020967	Xrcc6	99	85.052	ENSOGAG00000008821	XRCC6	97	84.524	Otolemur_garnettii
MGP_SPRETEiJ_G0020967	Xrcc6	99	70.912	ENSPPAG00000037167	XRCC6	97	69.485	Pan_paniscus
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.821	ENSPTRG00000022548	XRCC6	99	83.821	Pan_troglodytes
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.821	ENSPTRG00000045824	XRCC6	99	83.821	Pan_troglodytes
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.305	ENSPANG00000001252	XRCC6	99	83.305	Papio_anubis
MGP_SPRETEiJ_G0020967	Xrcc6	99	61.775	ENSPKIG00000003974	xrcc6	96	61.775	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0020967	Xrcc6	98	56.597	ENSPMGG00000014220	xrcc6	96	56.499	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0020967	Xrcc6	100	90.395	ENSPEMG00000023446	Xrcc6	96	90.395	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0020967	Xrcc6	99	78.694	ENSPCIG00000026409	XRCC6	96	78.098	Phascolarctos_cinereus
MGP_SPRETEiJ_G0020967	Xrcc6	99	58.219	ENSPFOG00000017173	xrcc6	96	58.219	Poecilia_formosa
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.877	ENSPLAG00000000562	xrcc6	96	57.877	Poecilia_latipinna
MGP_SPRETEiJ_G0020967	Xrcc6	99	58.219	ENSPMEG00000018478	xrcc6	96	58.219	Poecilia_mexicana
MGP_SPRETEiJ_G0020967	Xrcc6	99	58.532	ENSPREG00000020957	xrcc6	89	58.532	Poecilia_reticulata
MGP_SPRETEiJ_G0020967	Xrcc6	99	73.838	ENSPPYG00000011876	XRCC6	95	73.838	Pongo_abelii
MGP_SPRETEiJ_G0020967	Xrcc6	100	83.362	ENSPVAG00000001168	XRCC6	97	83.022	Pteropus_vampyrus
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.705	ENSPNYG00000003815	xrcc6	96	54.797	Pundamilia_nyererei
MGP_SPRETEiJ_G0020967	Xrcc6	100	93.310	ENSRNOG00000006392	Xrcc6	96	93.310	Rattus_norvegicus
MGP_SPRETEiJ_G0020967	Xrcc6	99	76.592	ENSRBIG00000039794	XRCC6	99	75.430	Rhinopithecus_bieti
MGP_SPRETEiJ_G0020967	Xrcc6	99	83.477	ENSRROG00000030297	XRCC6	97	82.904	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0020967	Xrcc6	70	69.042	ENSSBOG00000024724	-	99	69.042	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0020967	Xrcc6	99	78.007	ENSSHAG00000010790	XRCC6	96	77.419	Sarcophilus_harrisii
MGP_SPRETEiJ_G0020967	Xrcc6	99	61.433	ENSSFOG00015014409	xrcc6	96	61.433	Scleropages_formosus
MGP_SPRETEiJ_G0020967	Xrcc6	99	58.048	ENSSMAG00000006496	xrcc6	96	58.048	Scophthalmus_maximus
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.363	ENSSDUG00000007542	xrcc6	96	57.363	Seriola_dumerili
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.192	ENSSLDG00000009974	xrcc6	96	57.192	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0020967	Xrcc6	99	74.227	ENSSPUG00000012086	XRCC6	96	73.935	Sphenodon_punctatus
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.192	ENSSPAG00000015199	xrcc6	96	57.192	Stegastes_partitus
MGP_SPRETEiJ_G0020967	Xrcc6	99	71.134	ENSTGUG00000009852	-	96	70.339	Taeniopygia_guttata
MGP_SPRETEiJ_G0020967	Xrcc6	99	56.604	ENSTRUG00000017070	xrcc6	96	56.678	Takifugu_rubripes
MGP_SPRETEiJ_G0020967	Xrcc6	99	57.288	ENSTNIG00000012947	xrcc6	99	57.288	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0020967	Xrcc6	99	77.320	ENSTBEG00000011736	XRCC6	99	77.320	Tupaia_belangeri
MGP_SPRETEiJ_G0020967	Xrcc6	90	88.276	ENSTTRG00000006749	XRCC6	86	87.973	Tursiops_truncatus
MGP_SPRETEiJ_G0020967	Xrcc6	99	58.219	ENSXMAG00000009691	xrcc6	96	58.219	Xiphophorus_maculatus