EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0021031 (Gene tree)
Gene ID: -
Gene Symbol: Trmu
Alias: 1110005N20Rik|1600025P05Rik|Trmt1
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 19461 bases
Position: chr15:85736801-85756261
Accession: 1919276
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0041160	tRNA_Me_trans	PF03054.16	1.7e-140	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0041168	-	2082	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0041161	-	314	-	MGP_SPRETEiJ_P0041161	103 (aa)	-	-
MGP_SPRETEiJ_T0041160	-	1526	-	MGP_SPRETEiJ_P0041160	417 (aa)	-	UPI000000404E
MGP_SPRETEiJ_T0041162	-	743	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0041165	-	811	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0041164	-	667	-	MGP_SPRETEiJ_P0041164	57 (aa)	-	-
MGP_SPRETEiJ_T0041167	-	869	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0041166	-	774	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0041159	-	468	-	MGP_SPRETEiJ_P0041159	99 (aa)	-	UPI0001DD351F

Gene Model

Click here to download MGP_SPRETEiJ_G0021031's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0021031's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0021031	Trmu	100	91.228	ENSG00000100416	TRMU	100	94.667	Homo_sapiens
MGP_SPRETEiJ_G0021031	Trmu	100	68.345	ENSAPOG00000014458	trmu	100	68.345	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0021031	Trmu	99	89.183	ENSAMEG00000003319	TRMU	99	89.183	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0021031	Trmu	97	67.990	ENSACIG00000002101	trmu	97	67.990	Amphilophus_citrinellus
MGP_SPRETEiJ_G0021031	Trmu	100	68.825	ENSAOCG00000013155	trmu	100	68.825	Amphiprion_ocellaris
MGP_SPRETEiJ_G0021031	Trmu	100	68.345	ENSAPEG00000013350	trmu	100	68.345	Amphiprion_percula
MGP_SPRETEiJ_G0021031	Trmu	98	68.613	ENSATEG00000007814	trmu	100	68.613	Anabas_testudineus
MGP_SPRETEiJ_G0021031	Trmu	88	84.000	ENSAPLG00000016380	TRMU	98	78.329	Anas_platyrhynchos
MGP_SPRETEiJ_G0021031	Trmu	100	76.259	ENSACAG00000007720	TRMU	100	76.259	Anolis_carolinensis
MGP_SPRETEiJ_G0021031	Trmu	99	88.078	ENSANAG00000038053	TRMU	97	88.078	Aotus_nancymaae
MGP_SPRETEiJ_G0021031	Trmu	99	68.357	ENSACLG00000005395	trmu	98	69.377	Astatotilapia_calliptera
MGP_SPRETEiJ_G0021031	Trmu	88	80.460	ENSAMXG00000005282	trmu	99	70.343	Astyanax_mexicanus
MGP_SPRETEiJ_G0021031	Trmu	99	87.740	ENSBTAG00000005595	TRMU	99	87.740	Bos_taurus
MGP_SPRETEiJ_G0021031	Trmu	95	45.000	WBGene00007114	mttu-1	98	39.433	Caenorhabditis_elegans
MGP_SPRETEiJ_G0021031	Trmu	99	86.506	ENSCJAG00000000198	TRMU	99	86.506	Callithrix_jacchus
MGP_SPRETEiJ_G0021031	Trmu	99	90.754	ENSCAFG00000000779	TRMU	98	89.928	Canis_familiaris
MGP_SPRETEiJ_G0021031	Trmu	99	90.754	ENSCAFG00020009184	TRMU	98	89.928	Canis_lupus_dingo
MGP_SPRETEiJ_G0021031	Trmu	100	88.489	ENSCHIG00000017074	TRMU	100	88.489	Capra_hircus
MGP_SPRETEiJ_G0021031	Trmu	99	87.981	ENSTSYG00000003853	TRMU	99	87.981	Carlito_syrichta
MGP_SPRETEiJ_G0021031	Trmu	96	83.055	ENSCAPG00000013034	TRMU	98	83.055	Cavia_aperea
MGP_SPRETEiJ_G0021031	Trmu	99	88.193	ENSCPOG00000020780	TRMU	99	88.193	Cavia_porcellus
MGP_SPRETEiJ_G0021031	Trmu	99	86.905	ENSCCAG00000021641	TRMU	99	86.905	Cebus_capucinus
MGP_SPRETEiJ_G0021031	Trmu	99	87.351	ENSCATG00000032800	TRMU	99	87.351	Cercocebus_atys
MGP_SPRETEiJ_G0021031	Trmu	99	90.238	ENSCLAG00000017269	TRMU	99	90.238	Chinchilla_lanigera
MGP_SPRETEiJ_G0021031	Trmu	99	88.067	ENSCSAG00000005279	TRMU	99	88.067	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0021031	Trmu	88	84.000	ENSCPBG00000011621	TRMU	94	79.144	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0021031	Trmu	98	47.525	ENSCING00000019371	-	96	46.056	Ciona_intestinalis
MGP_SPRETEiJ_G0021031	Trmu	99	87.589	ENSCANG00000041645	TRMU	99	87.589	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0021031	Trmu	99	95.913	ENSCGRG00001001739	Trmu	99	95.913	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0021031	Trmu	89	98.039	ENSCGRG00000002781	Trmu	99	87.981	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0021031	Trmu	83	82.927	ENSCSEG00000012382	trmu	99	66.587	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0021031	Trmu	100	68.585	ENSCVAG00000001366	trmu	100	68.585	Cyprinodon_variegatus
MGP_SPRETEiJ_G0021031	Trmu	96	68.000	ENSDARG00000043734	trmu	96	68.000	Danio_rerio
MGP_SPRETEiJ_G0021031	Trmu	54	84.141	ENSDNOG00000047245	-	84	80.833	Dasypus_novemcinctus
MGP_SPRETEiJ_G0021031	Trmu	99	87.835	ENSDORG00000007455	Trmu	100	87.835	Dipodomys_ordii
MGP_SPRETEiJ_G0021031	Trmu	89	41.823	FBgn0040337	CG3021	99	41.584	Drosophila_melanogaster
MGP_SPRETEiJ_G0021031	Trmu	82	87.654	ENSETEG00000009394	-	66	86.441	Echinops_telfairi
MGP_SPRETEiJ_G0021031	Trmu	95	53.483	ENSEBUG00000007454	trmu	99	53.483	Eptatretus_burgeri
MGP_SPRETEiJ_G0021031	Trmu	98	89.487	ENSEASG00005021725	TRMU	99	88.729	Equus_asinus_asinus
MGP_SPRETEiJ_G0021031	Trmu	98	89.487	ENSECAG00000000467	TRMU	99	88.729	Equus_caballus
MGP_SPRETEiJ_G0021031	Trmu	70	87.500	ENSEEUG00000000074	-	78	88.889	Erinaceus_europaeus
MGP_SPRETEiJ_G0021031	Trmu	99	65.777	ENSELUG00000009464	trmu	99	66.848	Esox_lucius
MGP_SPRETEiJ_G0021031	Trmu	98	89.487	ENSFCAG00000006533	TRMU	99	88.916	Felis_catus
MGP_SPRETEiJ_G0021031	Trmu	88	86.000	ENSFALG00000010035	TRMU	96	78.158	Ficedula_albicollis
MGP_SPRETEiJ_G0021031	Trmu	93	88.889	ENSFDAG00000017472	TRMU	98	88.889	Fukomys_damarensis
MGP_SPRETEiJ_G0021031	Trmu	100	68.825	ENSFHEG00000003162	trmu	100	68.825	Fundulus_heteroclitus
MGP_SPRETEiJ_G0021031	Trmu	97	62.162	ENSGMOG00000001323	trmu	100	62.162	Gadus_morhua
MGP_SPRETEiJ_G0021031	Trmu	88	86.000	ENSGALG00000031922	TRMU	96	77.887	Gallus_gallus
MGP_SPRETEiJ_G0021031	Trmu	100	75.758	ENSGAFG00000013331	trmu	100	75.758	Gambusia_affinis
MGP_SPRETEiJ_G0021031	Trmu	99	65.155	ENSGACG00000019024	trmu	99	65.155	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0021031	Trmu	99	89.260	ENSGGOG00000000203	TRMU	99	89.260	Gorilla_gorilla
MGP_SPRETEiJ_G0021031	Trmu	99	67.874	ENSHBUG00000023421	trmu	99	67.874	Haplochromis_burtoni
MGP_SPRETEiJ_G0021031	Trmu	99	87.740	ENSHGLG00000009278	TRMU	99	87.740	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0021031	Trmu	99	87.740	ENSHGLG00100018863	TRMU	99	87.740	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0021031	Trmu	83	84.146	ENSHCOG00000013459	trmu	96	71.033	Hippocampus_comes
MGP_SPRETEiJ_G0021031	Trmu	98	68.382	ENSIPUG00000009785	trmu	100	68.382	Ictalurus_punctatus
MGP_SPRETEiJ_G0021031	Trmu	99	90.843	ENSSTOG00000010993	TRMU	99	90.843	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0021031	Trmu	99	91.346	ENSJJAG00000000667	Trmu	99	91.346	Jaculus_jaculus
MGP_SPRETEiJ_G0021031	Trmu	100	67.866	ENSKMAG00000008516	trmu	100	67.866	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0021031	Trmu	97	68.889	ENSLBEG00000018831	trmu	97	68.889	Labrus_bergylta
MGP_SPRETEiJ_G0021031	Trmu	97	73.399	ENSLACG00000013713	TRMU	97	73.399	Latimeria_chalumnae
MGP_SPRETEiJ_G0021031	Trmu	96	73.183	ENSLOCG00000016066	trmu	95	73.183	Lepisosteus_oculatus
MGP_SPRETEiJ_G0021031	Trmu	99	75.120	ENSLAFG00000005129	TRMU	99	75.120	Loxodonta_africana
MGP_SPRETEiJ_G0021031	Trmu	99	88.067	ENSMFAG00000039767	TRMU	99	88.067	Macaca_fascicularis
MGP_SPRETEiJ_G0021031	Trmu	99	88.067	ENSMMUG00000000807	TRMU	99	88.067	Macaca_mulatta
MGP_SPRETEiJ_G0021031	Trmu	99	88.067	ENSMNEG00000028164	TRMU	99	88.067	Macaca_nemestrina
MGP_SPRETEiJ_G0021031	Trmu	99	87.589	ENSMLEG00000033884	TRMU	99	87.589	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0021031	Trmu	99	68.689	ENSMAMG00000004717	trmu	99	68.689	Mastacembelus_armatus
MGP_SPRETEiJ_G0021031	Trmu	99	68.357	ENSMZEG00005015797	trmu	99	68.357	Maylandia_zebra
MGP_SPRETEiJ_G0021031	Trmu	88	84.000	ENSMGAG00000007550	TRMU	95	76.380	Meleagris_gallopavo
MGP_SPRETEiJ_G0021031	Trmu	99	95.673	ENSMAUG00000022282	Trmu	99	95.673	Mesocricetus_auratus
MGP_SPRETEiJ_G0021031	Trmu	99	89.588	ENSMICG00000029046	TRMU	100	89.588	Microcebus_murinus
MGP_SPRETEiJ_G0021031	Trmu	99	95.433	ENSMOCG00000014641	Trmu	99	95.433	Microtus_ochrogaster
MGP_SPRETEiJ_G0021031	Trmu	85	80.952	ENSMMOG00000007229	trmu	100	67.788	Mola_mola
MGP_SPRETEiJ_G0021031	Trmu	99	78.019	ENSMODG00000007433	TRMU	96	78.019	Monodelphis_domestica
MGP_SPRETEiJ_G0021031	Trmu	98	65.865	ENSMALG00000007721	trmu	100	65.865	Monopterus_albus
MGP_SPRETEiJ_G0021031	Trmu	100	100.000	MGP_CAROLIEiJ_G0020134	Trmu	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0021031	Trmu	100	100.000	ENSMUSG00000022386	Trmu	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0021031	Trmu	100	100.000	MGP_PahariEiJ_G0020139	Trmu	100	100.000	Mus_pahari
MGP_SPRETEiJ_G0021031	Trmu	99	88.675	ENSMPUG00000002523	TRMU	99	88.675	Mustela_putorius_furo
MGP_SPRETEiJ_G0021031	Trmu	99	92.530	ENSNGAG00000005132	Trmu	99	92.530	Nannospalax_galili
MGP_SPRETEiJ_G0021031	Trmu	99	68.116	ENSNBRG00000022690	trmu	100	68.966	Neolamprologus_brichardi
MGP_SPRETEiJ_G0021031	Trmu	99	87.828	ENSNLEG00000015773	TRMU	99	87.828	Nomascus_leucogenys
MGP_SPRETEiJ_G0021031	Trmu	99	60.784	ENSMEUG00000000216	TRMU	99	70.122	Notamacropus_eugenii
MGP_SPRETEiJ_G0021031	Trmu	99	88.756	ENSODEG00000014745	TRMU	99	88.756	Octodon_degus
MGP_SPRETEiJ_G0021031	Trmu	99	68.116	ENSONIG00000009821	trmu	99	68.116	Oreochromis_niloticus
MGP_SPRETEiJ_G0021031	Trmu	92	76.364	ENSOANG00000001891	TRMU	97	76.364	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0021031	Trmu	93	89.203	ENSOCUG00000003664	TRMU	97	87.469	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0021031	Trmu	98	66.586	ENSORLG00000019015	trmu	99	66.586	Oryzias_latipes
MGP_SPRETEiJ_G0021031	Trmu	98	66.344	ENSORLG00020006830	trmu	99	66.344	Oryzias_latipes_hni
MGP_SPRETEiJ_G0021031	Trmu	98	66.344	ENSORLG00015003907	trmu	99	66.344	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0021031	Trmu	58	63.750	ENSOMEG00000015541	trmu	86	63.750	Oryzias_melastigma
MGP_SPRETEiJ_G0021031	Trmu	100	72.727	ENSOMEG00000015518	-	100	72.727	Oryzias_melastigma
MGP_SPRETEiJ_G0021031	Trmu	99	87.981	ENSOGAG00000008096	TRMU	99	87.981	Otolemur_garnettii
MGP_SPRETEiJ_G0021031	Trmu	100	80.096	ENSOARG00000019475	TRMU	100	80.096	Ovis_aries
MGP_SPRETEiJ_G0021031	Trmu	99	89.260	ENSPPAG00000033944	TRMU	99	89.260	Pan_paniscus
MGP_SPRETEiJ_G0021031	Trmu	97	90.123	ENSPPRG00000004197	TRMU	99	89.157	Panthera_pardus
MGP_SPRETEiJ_G0021031	Trmu	88	90.000	ENSPTIG00000014122	TRMU	98	89.474	Panthera_tigris_altaica
MGP_SPRETEiJ_G0021031	Trmu	99	89.260	ENSPTRG00000014510	TRMU	99	89.260	Pan_troglodytes
MGP_SPRETEiJ_G0021031	Trmu	95	90.380	ENSPANG00000023074	TRMU	96	87.535	Papio_anubis
MGP_SPRETEiJ_G0021031	Trmu	98	67.391	ENSPKIG00000002849	trmu	100	67.391	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0021031	Trmu	88	90.000	ENSPSIG00000013020	TRMU	96	80.874	Pelodiscus_sinensis
MGP_SPRETEiJ_G0021031	Trmu	98	69.268	ENSPMGG00000004083	trmu	99	69.268	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0021031	Trmu	99	96.154	ENSPEMG00000014007	Trmu	99	96.154	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0021031	Trmu	96	78.947	ENSPCIG00000009923	TRMU	97	77.349	Phascolarctos_cinereus
MGP_SPRETEiJ_G0021031	Trmu	95	67.588	ENSPFOG00000008197	trmu	89	67.588	Poecilia_formosa
MGP_SPRETEiJ_G0021031	Trmu	99	69.586	ENSPLAG00000008414	trmu	99	69.586	Poecilia_latipinna
MGP_SPRETEiJ_G0021031	Trmu	100	69.305	ENSPMEG00000004326	trmu	100	69.305	Poecilia_mexicana
MGP_SPRETEiJ_G0021031	Trmu	99	69.586	ENSPREG00000007980	trmu	99	69.586	Poecilia_reticulata
MGP_SPRETEiJ_G0021031	Trmu	99	89.260	ENSPPYG00000011949	TRMU	99	89.260	Pongo_abelii
MGP_SPRETEiJ_G0021031	Trmu	88	86.000	ENSPCAG00000013462	TRMU	99	78.093	Procavia_capensis
MGP_SPRETEiJ_G0021031	Trmu	99	89.183	ENSPCOG00000016539	TRMU	99	89.183	Propithecus_coquereli
MGP_SPRETEiJ_G0021031	Trmu	83	93.902	ENSPVAG00000013202	TRMU	99	78.846	Pteropus_vampyrus
MGP_SPRETEiJ_G0021031	Trmu	99	67.874	ENSPNYG00000005629	trmu	99	67.874	Pundamilia_nyererei
MGP_SPRETEiJ_G0021031	Trmu	98	68.780	ENSPNAG00000006339	trmu	96	68.780	Pygocentrus_nattereri
MGP_SPRETEiJ_G0021031	Trmu	100	97.602	ENSRNOG00000016465	Trmu	100	97.602	Rattus_norvegicus
MGP_SPRETEiJ_G0021031	Trmu	99	87.351	ENSRBIG00000038973	TRMU	99	87.351	Rhinopithecus_bieti
MGP_SPRETEiJ_G0021031	Trmu	99	87.589	ENSRROG00000004267	TRMU	99	87.589	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0021031	Trmu	96	31.068	YDL033C	SLM3	91	30.923	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0021031	Trmu	99	88.193	ENSSBOG00000030184	TRMU	99	88.193	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0021031	Trmu	90	67.914	ENSSFOG00015020664	trmu	98	67.914	Scleropages_formosus
MGP_SPRETEiJ_G0021031	Trmu	96	68.922	ENSSMAG00000019450	trmu	96	68.922	Scophthalmus_maximus
MGP_SPRETEiJ_G0021031	Trmu	100	68.345	ENSSDUG00000011913	trmu	100	68.345	Seriola_dumerili
MGP_SPRETEiJ_G0021031	Trmu	100	68.585	ENSSLDG00000011684	trmu	100	68.585	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0021031	Trmu	88	84.000	ENSSPUG00000017123	TRMU	95	68.750	Sphenodon_punctatus
MGP_SPRETEiJ_G0021031	Trmu	100	68.345	ENSSPAG00000021875	trmu	100	68.345	Stegastes_partitus
MGP_SPRETEiJ_G0021031	Trmu	98	88.480	ENSSSCG00000000007	TRMU	99	87.143	Sus_scrofa
MGP_SPRETEiJ_G0021031	Trmu	88	84.000	ENSTGUG00000003663	-	100	78.820	Taeniopygia_guttata
MGP_SPRETEiJ_G0021031	Trmu	90	79.775	ENSTRUG00000003403	-	89	79.775	Takifugu_rubripes
MGP_SPRETEiJ_G0021031	Trmu	97	70.968	ENSTRUG00000001231	trmu	98	70.968	Takifugu_rubripes
MGP_SPRETEiJ_G0021031	Trmu	97	70.617	ENSTNIG00000010484	trmu	96	70.617	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0021031	Trmu	93	54.522	ENSTBEG00000011276	-	99	54.522	Tupaia_belangeri
MGP_SPRETEiJ_G0021031	Trmu	99	88.571	ENSTTRG00000004160	TRMU	99	88.571	Tursiops_truncatus
MGP_SPRETEiJ_G0021031	Trmu	89	86.275	ENSUAMG00000024825	TRMU	97	90.722	Ursus_americanus
MGP_SPRETEiJ_G0021031	Trmu	88	88.000	ENSUMAG00000019079	TRMU	97	90.272	Ursus_maritimus
MGP_SPRETEiJ_G0021031	Trmu	88	84.000	ENSVPAG00000000685	-	100	75.799	Vicugna_pacos
MGP_SPRETEiJ_G0021031	Trmu	99	90.120	ENSVVUG00000024963	TRMU	99	90.120	Vulpes_vulpes
MGP_SPRETEiJ_G0021031	Trmu	99	72.038	ENSXETG00000023304	trmu	99	72.038	Xenopus_tropicalis
MGP_SPRETEiJ_G0021031	Trmu	99	67.548	ENSXCOG00000015105	trmu	99	67.548	Xiphophorus_couchianus
MGP_SPRETEiJ_G0021031	Trmu	99	69.586	ENSXMAG00000006697	trmu	99	69.586	Xiphophorus_maculatus