EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0021294 (Gene tree)
Gene ID
-
Gene Symbol
Srl
Alias
9830004M20Rik|sar|sarcalumenin
Full Name
sarcalumenin
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Minus strand
Length
67484 bases
Position
chr16:1036262-1103745
Accession
2146620
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0042012MMR_HSR1PF01926.232.1e-0811
MGP_SPRETEiJ_P0042013MMR_HSR1PF01926.237.2e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0042012-3683-MGP_SPRETEiJ_P0042012472 (aa)-UPI00000EAD3E
MGP_SPRETEiJ_T0042013-4973-MGP_SPRETEiJ_P0042013906 (aa)--
MGP_SPRETEiJ_T0042014-366--- (aa)--
MGP_SPRETEiJ_T0042015-349--- (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0021294's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0021294's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0021294Srl7733.973MGP_SPRETEiJ_G0023514Ehd16733.973
MGP_SPRETEiJ_G0021294Srl7932.440MGP_SPRETEiJ_G0022782Ehd37332.506
MGP_SPRETEiJ_G0021294Srl8431.738MGP_SPRETEiJ_G0025077Ehd47131.738
MGP_SPRETEiJ_G0021294Srl8232.905MGP_SPRETEiJ_G0030299Ehd29747.059
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0021294Srl10095.560ENSG00000185739SRL10097.216Homo_sapiens
MGP_SPRETEiJ_G0021294Srl9476.018ENSAPOG00000012432SRL9975.501Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0021294Srl10082.203ENSAPOG00000018093srl10084.459Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0021294Srl9896.104ENSAMEG00000010862SRL10067.503Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0021294Srl9484.842ENSACIG00000015799srl10083.664Amphilophus_citrinellus
MGP_SPRETEiJ_G0021294Srl9474.775ENSACIG00000015419SRL9974.775Amphilophus_citrinellus
MGP_SPRETEiJ_G0021294Srl9774.130ENSAOCG00000017049SRL9974.342Amphiprion_ocellaris
MGP_SPRETEiJ_G0021294Srl9285.023ENSAOCG00000007574srl10085.023Amphiprion_ocellaris
MGP_SPRETEiJ_G0021294Srl9770.153ENSAPEG00000006533SRL9971.272Amphiprion_percula
MGP_SPRETEiJ_G0021294Srl10082.415ENSAPEG00000006911srl9783.516Amphiprion_percula
MGP_SPRETEiJ_G0021294Srl10082.203ENSATEG00000024315srl9783.516Anabas_testudineus
MGP_SPRETEiJ_G0021294Srl9473.626ENSATEG00000009643SRL5274.066Anabas_testudineus
MGP_SPRETEiJ_G0021294Srl10086.885ENSACAG00000016380SRL8689.362Anolis_carolinensis
MGP_SPRETEiJ_G0021294Srl9472.747ENSACLG00000024674SRL5575.062Astatotilapia_calliptera
MGP_SPRETEiJ_G0021294Srl9882.759ENSACLG00000027685srl9784.842Astatotilapia_calliptera
MGP_SPRETEiJ_G0021294Srl9980.679ENSAMXG00000018789srl8783.559Astyanax_mexicanus
MGP_SPRETEiJ_G0021294Srl8877.590ENSAMXG00000038693SRL10072.848Astyanax_mexicanus
MGP_SPRETEiJ_G0021294Srl9696.247ENSBTAG00000001078SRL9866.741Bos_taurus
MGP_SPRETEiJ_G0021294Srl9497.065ENSCJAG00000019750SRL9796.499Callithrix_jacchus
MGP_SPRETEiJ_G0021294Srl9796.087ENSCAFG00000019233SRL8992.917Canis_familiaris
MGP_SPRETEiJ_G0021294Srl9696.484ENSCAFG00020025024SRL9870.885Canis_lupus_dingo
MGP_SPRETEiJ_G0021294Srl9995.054ENSCHIG00000017927SRL9867.522Capra_hircus
MGP_SPRETEiJ_G0021294Srl10095.983ENSTSYG00000007919SRL10098.144Carlito_syrichta
MGP_SPRETEiJ_G0021294Srl10097.458ENSCPOG00000012643SRL10097.458Cavia_porcellus
MGP_SPRETEiJ_G0021294Srl9490.745ENSCCAG00000032646SRL10097.098Cebus_capucinus
MGP_SPRETEiJ_G0021294Srl10095.772ENSCATG00000032227-9796.499Cercocebus_atys
MGP_SPRETEiJ_G0021294Srl10097.246ENSCLAG00000016242SRL10097.246Chinchilla_lanigera
MGP_SPRETEiJ_G0021294Srl9795.435ENSCSAG00000009635-8990.607Chlorocebus_sabaeus
MGP_SPRETEiJ_G0021294Srl8296.623ENSCHOG00000001618SRL8596.623Choloepus_hoffmanni
MGP_SPRETEiJ_G0021294Srl9693.523ENSCPBG00000026371SRL9689.009Chrysemys_picta_bellii
MGP_SPRETEiJ_G0021294Srl8860.432ENSCING00000005231-9360.432Ciona_intestinalis
MGP_SPRETEiJ_G0021294Srl10095.560ENSCANG00000035872SRL10097.216Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0021294Srl10097.458ENSCGRG00001016630Srl10097.458Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0021294Srl10097.458ENSCGRG00000005458Srl10097.458Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0021294Srl9970.576ENSCSEG00000011866SRL9172.210Cynoglossus_semilaevis
MGP_SPRETEiJ_G0021294Srl10082.203ENSCSEG00000016151srl9783.260Cynoglossus_semilaevis
MGP_SPRETEiJ_G0021294Srl10082.203ENSCVAG00000003513srl9684.615Cyprinodon_variegatus
MGP_SPRETEiJ_G0021294Srl9475.664ENSCVAG00000022465SRL6075.664Cyprinodon_variegatus
MGP_SPRETEiJ_G0021294Srl8076.562ENSDARG00000112959CABZ01072309.110076.562Danio_rerio
MGP_SPRETEiJ_G0021294Srl10082.415ENSDARG00000104587srl9883.007Danio_rerio
MGP_SPRETEiJ_G0021294Srl9695.787ENSDNOG00000011643SRL9870.123Dasypus_novemcinctus
MGP_SPRETEiJ_G0021294Srl10097.881ENSDORG00000014807Srl10097.881Dipodomys_ordii
MGP_SPRETEiJ_G0021294Srl7568.067ENSEBUG00000015937srl9068.067Eptatretus_burgeri
MGP_SPRETEiJ_G0021294Srl9596.000ENSEASG00005000942SRL9870.838Equus_asinus_asinus
MGP_SPRETEiJ_G0021294Srl9995.127ENSECAG00000024219SRL9695.824Equus_caballus
MGP_SPRETEiJ_G0021294Srl10078.234ENSELUG00000015616srl9779.493Esox_lucius
MGP_SPRETEiJ_G0021294Srl8876.923ENSELUG00000022266SRL5169.199Esox_lucius
MGP_SPRETEiJ_G0021294Srl10094.715ENSFCAG00000022075SRL9696.703Felis_catus
MGP_SPRETEiJ_G0021294Srl9690.066ENSFALG00000004328SRL6490.466Ficedula_albicollis
MGP_SPRETEiJ_G0021294Srl10097.246ENSFDAG00000006199SRL10097.246Fukomys_damarensis
MGP_SPRETEiJ_G0021294Srl10071.193ENSFHEG00000011854SRL9876.644Fundulus_heteroclitus
MGP_SPRETEiJ_G0021294Srl10081.780ENSFHEG00000011239srl9782.819Fundulus_heteroclitus
MGP_SPRETEiJ_G0021294Srl9381.015ENSGMOG00000014954srl9981.015Gadus_morhua
MGP_SPRETEiJ_G0021294Srl9990.254ENSGALG00000038884SRL9691.372Gallus_gallus
MGP_SPRETEiJ_G0021294Srl9477.376ENSGAFG00000016984SRL9877.376Gambusia_affinis
MGP_SPRETEiJ_G0021294Srl10081.780ENSGAFG00000000010srl9982.495Gambusia_affinis
MGP_SPRETEiJ_G0021294Srl9382.561ENSGACG00000011332srl9982.561Gasterosteus_aculeatus
MGP_SPRETEiJ_G0021294Srl10095.349ENSGGOG00000011312-9796.499Gorilla_gorilla
MGP_SPRETEiJ_G0021294Srl9882.759ENSHBUG00000007581srl9784.842Haplochromis_burtoni
MGP_SPRETEiJ_G0021294Srl9472.527ENSHBUG00000015710SRL6566.284Haplochromis_burtoni
MGP_SPRETEiJ_G0021294Srl10097.669ENSHGLG00000015271SRL10097.669Heterocephalus_glaber_female
MGP_SPRETEiJ_G0021294Srl10097.669ENSHGLG00100019378SRL10097.669Heterocephalus_glaber_male
MGP_SPRETEiJ_G0021294Srl9980.638ENSHCOG00000008687srl9883.710Hippocampus_comes
MGP_SPRETEiJ_G0021294Srl9572.331ENSHCOG00000001012SRL5172.331Hippocampus_comes
MGP_SPRETEiJ_G0021294Srl9270.413ENSIPUG00000011609SRL9570.413Ictalurus_punctatus
MGP_SPRETEiJ_G0021294Srl10080.297ENSIPUG00000012513srl9781.596Ictalurus_punctatus
MGP_SPRETEiJ_G0021294Srl10097.246ENSSTOG00000021151-10097.246Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0021294Srl10098.517ENSJJAG00000016400Srl10098.517Jaculus_jaculus
MGP_SPRETEiJ_G0021294Srl9375.964ENSKMAG00000019537SRL10075.964Kryptolebias_marmoratus
MGP_SPRETEiJ_G0021294Srl9882.468ENSKMAG00000014115srl9385.986Kryptolebias_marmoratus
MGP_SPRETEiJ_G0021294Srl9674.123ENSLBEG00000013811SRL9973.856Labrus_bergylta
MGP_SPRETEiJ_G0021294Srl10082.203ENSLBEG00000026643srl9683.077Labrus_bergylta
MGP_SPRETEiJ_G0021294Srl9686.726ENSLACG00000002825SRL10086.755Latimeria_chalumnae
MGP_SPRETEiJ_G0021294Srl9982.942ENSLOCG00000002644srl9684.768Lepisosteus_oculatus
MGP_SPRETEiJ_G0021294Srl9696.239ENSLAFG00000006329SRL9871.300Loxodonta_africana
MGP_SPRETEiJ_G0021294Srl9197.216ENSMFAG00000037383SRL10097.216Macaca_fascicularis
MGP_SPRETEiJ_G0021294Srl9895.445ENSMNEG00000019236-9696.468Macaca_nemestrina
MGP_SPRETEiJ_G0021294Srl10087.949ENSMLEG00000032156SRL9688.403Mandrillus_leucophaeus
MGP_SPRETEiJ_G0021294Srl9373.568ENSMAMG00000013756SRL5373.568Mastacembelus_armatus
MGP_SPRETEiJ_G0021294Srl9980.851ENSMAMG00000023322srl9484.842Mastacembelus_armatus
MGP_SPRETEiJ_G0021294Srl9882.759ENSMZEG00005004548srl9784.842Maylandia_zebra
MGP_SPRETEiJ_G0021294Srl9472.747ENSMZEG00005004010SRL6566.475Maylandia_zebra
MGP_SPRETEiJ_G0021294Srl9691.353ENSMGAG00000009342SRL9592.838Meleagris_gallopavo
MGP_SPRETEiJ_G0021294Srl9695.614ENSMICG00000032307SRL9795.624Microcebus_murinus
MGP_SPRETEiJ_G0021294Srl10097.034ENSMOCG00000008208Srl10097.034Microtus_ochrogaster
MGP_SPRETEiJ_G0021294Srl9484.615ENSMMOG00000013970srl9884.615Mola_mola
MGP_SPRETEiJ_G0021294Srl9372.807ENSMMOG00000021572SRL9972.967Mola_mola
MGP_SPRETEiJ_G0021294Srl9696.247ENSMODG00000016380-9864.179Monodelphis_domestica
MGP_SPRETEiJ_G0021294Srl9682.379ENSMALG00000005039srl9883.937Monopterus_albus
MGP_SPRETEiJ_G0021294Srl8976.134ENSMALG00000000670SRL9876.316Monopterus_albus
MGP_SPRETEiJ_G0021294Srl100100.000MGP_CAROLIEiJ_G0020400Srl100100.000Mus_caroli
MGP_SPRETEiJ_G0021294Srl100100.000ENSMUSG00000022519Srl100100.000Mus_musculus
MGP_SPRETEiJ_G0021294Srl9699.558MGP_PahariEiJ_G0016108Srl10095.011Mus_pahari
MGP_SPRETEiJ_G0021294Srl9696.681ENSMPUG00000015025SRL9771.076Mustela_putorius_furo
MGP_SPRETEiJ_G0021294Srl9895.445ENSMLUG00000030733SRL10070.333Myotis_lucifugus
MGP_SPRETEiJ_G0021294Srl10098.305ENSNGAG00000019741Srl10098.305Nannospalax_galili
MGP_SPRETEiJ_G0021294Srl9472.747ENSNBRG00000002422SRL6566.667Neolamprologus_brichardi
MGP_SPRETEiJ_G0021294Srl9882.759ENSNBRG00000023775srl9783.333Neolamprologus_brichardi
MGP_SPRETEiJ_G0021294Srl10089.006ENSNLEG00000029051SRL9689.716Nomascus_leucogenys
MGP_SPRETEiJ_G0021294Srl9790.000ENSOPRG00000000477-9867.624Ochotona_princeps
MGP_SPRETEiJ_G0021294Srl10097.669ENSODEG00000013256SRL10097.669Octodon_degus
MGP_SPRETEiJ_G0021294Srl9782.789ENSONIG00000005192srl9683.407Oreochromis_niloticus
MGP_SPRETEiJ_G0021294Srl9795.435ENSOCUG00000025140SRL9873.817Oryctolagus_cuniculus
MGP_SPRETEiJ_G0021294Srl10081.144ENSORLG00000008291srl9285.567Oryzias_latipes
MGP_SPRETEiJ_G0021294Srl9574.833ENSORLG00000015064SRL9875.000Oryzias_latipes
MGP_SPRETEiJ_G0021294Srl9575.056ENSORLG00020018173SRL9875.223Oryzias_latipes_hni
MGP_SPRETEiJ_G0021294Srl10081.356ENSORLG00020019784srl7986.047Oryzias_latipes_hni
MGP_SPRETEiJ_G0021294Srl9575.278ENSORLG00015019063SRL9875.446Oryzias_latipes_hsok
MGP_SPRETEiJ_G0021294Srl10080.932ENSORLG00015009342srl9382.444Oryzias_latipes_hsok
MGP_SPRETEiJ_G0021294Srl10081.144ENSOMEG00000010006srl9883.864Oryzias_melastigma
MGP_SPRETEiJ_G0021294Srl9671.581ENSOMEG00000005682SRL5373.407Oryzias_melastigma
MGP_SPRETEiJ_G0021294Srl9695.815ENSOGAG00000029266SRL10068.346Otolemur_garnettii
MGP_SPRETEiJ_G0021294Srl9995.054ENSOARG00000003074SRL7796.460Ovis_aries
MGP_SPRETEiJ_G0021294Srl9796.288ENSPPAG00000024919-10097.216Pan_paniscus
MGP_SPRETEiJ_G0021294Srl10094.926ENSPPRG00000010274SRL10097.912Panthera_pardus
MGP_SPRETEiJ_G0021294Srl10094.926ENSPTIG00000015162SRL10097.912Panthera_tigris_altaica
MGP_SPRETEiJ_G0021294Srl10095.560ENSPTRG00000007712SRL10097.216Pan_troglodytes
MGP_SPRETEiJ_G0021294Srl9895.662ENSPANG00000013804SRL9796.689Papio_anubis
MGP_SPRETEiJ_G0021294Srl10074.153ENSPKIG00000024974SRL8876.471Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0021294Srl10081.395ENSPKIG00000006405srl9782.571Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0021294Srl9690.308ENSPSIG00000008586SRL5190.308Pelodiscus_sinensis
MGP_SPRETEiJ_G0021294Srl9683.444ENSPMGG00000021081srl9982.391Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0021294Srl9473.303ENSPMGG00000023505-9973.469Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0021294Srl10098.093ENSPEMG00000015842Srl10098.093Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0021294Srl8968.119ENSPMAG00000004786srl9968.119Petromyzon_marinus
MGP_SPRETEiJ_G0021294Srl9695.787ENSPCIG00000012128SRL9995.796Phascolarctos_cinereus
MGP_SPRETEiJ_G0021294Srl10080.165ENSPFOG00000011408srl9681.330Poecilia_formosa
MGP_SPRETEiJ_G0021294Srl9484.270ENSPLAG00000008017srl9982.713Poecilia_latipinna
MGP_SPRETEiJ_G0021294Srl9476.244ENSPLAG00000002932SRL9876.244Poecilia_latipinna
MGP_SPRETEiJ_G0021294Srl10081.992ENSPMEG00000006745srl9982.713Poecilia_mexicana
MGP_SPRETEiJ_G0021294Srl9573.118ENSPMEG00000005890SRL6172.611Poecilia_mexicana
MGP_SPRETEiJ_G0021294Srl10081.568ENSPREG00000007751srl9984.045Poecilia_reticulata
MGP_SPRETEiJ_G0021294Srl9477.376ENSPREG00000000315SRL9877.376Poecilia_reticulata
MGP_SPRETEiJ_G0021294Srl8997.375ENSPPYG00000007053SRL9897.375Pongo_abelii
MGP_SPRETEiJ_G0021294Srl9694.260ENSPCAG00000003378-8490.121Procavia_capensis
MGP_SPRETEiJ_G0021294Srl9795.633ENSPCOG00000023135SRL10097.448Propithecus_coquereli
MGP_SPRETEiJ_G0021294Srl9697.345ENSPVAG00000006586SRL9870.177Pteropus_vampyrus
MGP_SPRETEiJ_G0021294Srl9472.747ENSPNYG00000003423SRL6566.475Pundamilia_nyererei
MGP_SPRETEiJ_G0021294Srl9882.759ENSPNYG00000001200srl9784.842Pundamilia_nyererei
MGP_SPRETEiJ_G0021294Srl9872.903ENSPNAG00000007361-9274.610Pygocentrus_nattereri
MGP_SPRETEiJ_G0021294Srl10079.449ENSPNAG00000023106srl9681.457Pygocentrus_nattereri
MGP_SPRETEiJ_G0021294Srl9797.817ENSRNOG00000005269Srl9889.123Rattus_norvegicus
MGP_SPRETEiJ_G0021294Srl9795.435ENSRBIG00000042358SRL9870.053Rhinopithecus_bieti
MGP_SPRETEiJ_G0021294Srl9497.065ENSSBOG00000029273SRL9796.499Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0021294Srl9795.614ENSSHAG00000011715-9964.339Sarcophilus_harrisii
MGP_SPRETEiJ_G0021294Srl9476.697ENSSFOG00015021327SRL5175.109Scleropages_formosus
MGP_SPRETEiJ_G0021294Srl10079.339ENSSFOG00015009773srl9783.444Scleropages_formosus
MGP_SPRETEiJ_G0021294Srl10081.607ENSSMAG00000016274srl9883.556Scophthalmus_maximus
MGP_SPRETEiJ_G0021294Srl9372.747ENSSMAG00000002232SRL5073.085Scophthalmus_maximus
MGP_SPRETEiJ_G0021294Srl9475.056ENSSDUG00000009161SRL9875.223Seriola_dumerili
MGP_SPRETEiJ_G0021294Srl9485.294ENSSDUG00000010808srl9785.294Seriola_dumerili
MGP_SPRETEiJ_G0021294Srl9683.700ENSSLDG00000022024srl9783.700Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0021294Srl9474.617ENSSLDG00000014601SRL9975.055Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0021294Srl9691.372ENSSPUG00000016859SRL9991.391Sphenodon_punctatus
MGP_SPRETEiJ_G0021294Srl10082.627ENSSPAG00000019105srl9783.772Stegastes_partitus
MGP_SPRETEiJ_G0021294Srl9575.724ENSSPAG00000014254SRL9975.724Stegastes_partitus
MGP_SPRETEiJ_G0021294Srl9695.585ENSSSCG00000007949SRL9995.982Sus_scrofa
MGP_SPRETEiJ_G0021294Srl7792.541ENSTGUG00000016121-10092.541Taeniopygia_guttata
MGP_SPRETEiJ_G0021294Srl9690.110ENSTGUG00000003951-9990.708Taeniopygia_guttata
MGP_SPRETEiJ_G0021294Srl10082.203ENSTRUG00000006005srl9783.040Takifugu_rubripes
MGP_SPRETEiJ_G0021294Srl8975.656ENSTRUG00000013310SRL5575.656Takifugu_rubripes
MGP_SPRETEiJ_G0021294Srl9682.819ENSTNIG00000009739srl9782.819Tetraodon_nigroviridis
MGP_SPRETEiJ_G0021294Srl9395.909ENSTTRG00000002709-6795.909Tursiops_truncatus
MGP_SPRETEiJ_G0021294Srl9697.566ENSUAMG00000005701SRL9871.139Ursus_americanus
MGP_SPRETEiJ_G0021294Srl9697.345ENSUMAG00000002574SRL9870.833Ursus_maritimus
MGP_SPRETEiJ_G0021294Srl9696.696ENSVVUG00000016331-8770.246Vulpes_vulpes
MGP_SPRETEiJ_G0021294Srl9689.602ENSXETG00000017313srl10089.602Xenopus_tropicalis
MGP_SPRETEiJ_G0021294Srl9675.610ENSXCOG00000014584SRL10075.610Xiphophorus_couchianus
MGP_SPRETEiJ_G0021294Srl8985.511ENSXCOG00000010424srl9785.511Xiphophorus_couchianus
MGP_SPRETEiJ_G0021294Srl9573.434ENSXMAG00000027598SRL6472.921Xiphophorus_maculatus
MGP_SPRETEiJ_G0021294Srl10081.780ENSXMAG00000004625srl9283.040Xiphophorus_maculatus

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