EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0021379 (Gene tree)
Gene ID: -
Gene Symbol: Snai2
Alias: Slug|Slugh|Snail2
Full Name: snail family zinc finger 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 3550 bases
Position: chr16:11515416-11518965
Accession: 1096393
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0042350	zf-C2H2	PF00096.26	1.6e-27	1	5
MGP_SPRETEiJ_P0042350	zf-C2H2	PF00096.26	1.6e-27	2	5
MGP_SPRETEiJ_P0042350	zf-C2H2	PF00096.26	1.6e-27	3	5
MGP_SPRETEiJ_P0042350	zf-C2H2	PF00096.26	1.6e-27	4	5
MGP_SPRETEiJ_P0042350	zf-C2H2	PF00096.26	1.6e-27	5	5
MGP_SPRETEiJ_P0042350	zf-met	PF12874.7	3.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0042350	-	2031	-	MGP_SPRETEiJ_P0042350	269 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0021379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0021379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0021379	Snai2	99	46.599	MGP_SPRETEiJ_G0032780	Snai3	99	46.552
MGP_SPRETEiJ_G0021379	Snai2	50	38.776	MGP_SPRETEiJ_G0034256	Zic3	64	38.849
MGP_SPRETEiJ_G0021379	Snai2	99	52.708	MGP_SPRETEiJ_G0025629	Snai1	98	50.360
MGP_SPRETEiJ_G0021379	Snai2	55	39.726	MGP_SPRETEiJ_G0017233	Zfp672	82	39.726

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSG00000019549	SNAI2	100	95.539	Homo_sapiens
MGP_SPRETEiJ_G0021379	Snai2	99	48.630	ENSG00000185669	SNAI3	99	49.655	Homo_sapiens
MGP_SPRETEiJ_G0021379	Snai2	100	96.283	ENSAMEG00000009606	SNAI2	100	96.283	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0021379	Snai2	99	47.697	ENSANAG00000032748	SNAI3	99	46.624	Aotus_nancymaae
MGP_SPRETEiJ_G0021379	Snai2	100	94.796	ENSANAG00000021163	SNAI2	100	94.796	Aotus_nancymaae
MGP_SPRETEiJ_G0021379	Snai2	100	91.450	ENSBTAG00000013227	SNAI2	100	91.450	Bos_taurus
MGP_SPRETEiJ_G0021379	Snai2	99	44.554	ENSBTAG00000017528	SNAI3	99	45.875	Bos_taurus
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSCJAG00000013499	SNAI2	100	95.539	Callithrix_jacchus
MGP_SPRETEiJ_G0021379	Snai2	99	48.980	ENSCAFG00000029458	SNAI3	99	48.973	Canis_familiaris
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSCAFG00000006638	SNAI2	100	95.539	Canis_familiaris
MGP_SPRETEiJ_G0021379	Snai2	99	49.320	ENSCAFG00020004719	SNAI3	99	49.315	Canis_lupus_dingo
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSCAFG00020015384	SNAI2	100	95.539	Canis_lupus_dingo
MGP_SPRETEiJ_G0021379	Snai2	100	91.078	ENSCHIG00000024410	SNAI2	100	91.078	Capra_hircus
MGP_SPRETEiJ_G0021379	Snai2	99	46.205	ENSCHIG00000018087	SNAI3	99	46.844	Capra_hircus
MGP_SPRETEiJ_G0021379	Snai2	90	95.041	ENSTSYG00000030892	SNAI2	90	95.041	Carlito_syrichta
MGP_SPRETEiJ_G0021379	Snai2	57	68.750	ENSTSYG00000025594	SNAI3	55	68.750	Carlito_syrichta
MGP_SPRETEiJ_G0021379	Snai2	83	94.643	ENSCAPG00000013078	SNAI2	100	94.643	Cavia_aperea
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSCCAG00000024100	SNAI2	100	95.539	Cebus_capucinus
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSCATG00000028656	SNAI2	100	95.539	Cercocebus_atys
MGP_SPRETEiJ_G0021379	Snai2	99	49.831	ENSCATG00000031714	SNAI3	99	48.013	Cercocebus_atys
MGP_SPRETEiJ_G0021379	Snai2	100	96.283	ENSCLAG00000011797	SNAI2	100	96.283	Chinchilla_lanigera
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSCSAG00000014787	SNAI2	100	95.539	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0021379	Snai2	100	92.193	ENSCPBG00000020255	SNAI2	100	92.193	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0021379	Snai2	99	52.525	ENSCPBG00000023474	SNAI3	99	52.525	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0021379	Snai2	50	65.672	ENSCSAVG00000009819	-	69	65.672	Ciona_savignyi
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSCANG00000029656	SNAI2	100	95.539	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0021379	Snai2	100	97.398	ENSCGRG00001013674	Snai2	100	97.398	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0021379	Snai2	99	47.751	ENSCGRG00001011389	Snai3	99	48.084	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0021379	Snai2	100	97.398	ENSCGRG00000012119	Snai2	100	97.398	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0021379	Snai2	99	47.751	ENSCGRG00000014932	Snai3	99	48.084	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0021379	Snai2	78	34.685	ENSDNOG00000035204	-	100	34.375	Dasypus_novemcinctus
MGP_SPRETEiJ_G0021379	Snai2	100	92.937	ENSDORG00000029620	Snai2	100	92.937	Dipodomys_ordii
MGP_SPRETEiJ_G0021379	Snai2	99	50.172	ENSECAG00000012131	SNAI3	99	49.333	Equus_caballus
MGP_SPRETEiJ_G0021379	Snai2	100	78.439	ENSELUG00000021795	SNAI2	79	79.926	Esox_lucius
MGP_SPRETEiJ_G0021379	Snai2	99	57.439	ENSELUG00000018742	-	99	56.747	Esox_lucius
MGP_SPRETEiJ_G0021379	Snai2	99	46.931	ENSFCAG00000043885	SNAI3	99	46.931	Felis_catus
MGP_SPRETEiJ_G0021379	Snai2	89	64.017	ENSFALG00000012974	-	98	64.854	Ficedula_albicollis
MGP_SPRETEiJ_G0021379	Snai2	100	96.283	ENSFDAG00000016958	SNAI2	100	96.283	Fukomys_damarensis
MGP_SPRETEiJ_G0021379	Snai2	99	53.220	ENSGAGG00000023571	SNAI3	99	53.401	Gopherus_agassizii
MGP_SPRETEiJ_G0021379	Snai2	100	92.193	ENSGAGG00000000426	SNAI2	100	92.193	Gopherus_agassizii
MGP_SPRETEiJ_G0021379	Snai2	99	49.831	ENSGGOG00000012559	SNAI3	99	46.624	Gorilla_gorilla
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSGGOG00000000959	SNAI2	100	95.539	Gorilla_gorilla
MGP_SPRETEiJ_G0021379	Snai2	100	74.074	ENSHCOG00000019435	SNAI2	100	74.444	Hippocampus_comes
MGP_SPRETEiJ_G0021379	Snai2	100	70.260	ENSIPUG00000000131	snai2	100	69.517	Ictalurus_punctatus
MGP_SPRETEiJ_G0021379	Snai2	100	95.911	ENSSTOG00000028743	SNAI2	100	95.911	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0021379	Snai2	99	49.147	ENSJJAG00000019934	Snai3	99	47.297	Jaculus_jaculus
MGP_SPRETEiJ_G0021379	Snai2	52	86.429	ENSLOCG00000004887	SNAI3	97	80.503	Lepisosteus_oculatus
MGP_SPRETEiJ_G0021379	Snai2	100	86.617	ENSLOCG00000005992	SNAI2	100	86.617	Lepisosteus_oculatus
MGP_SPRETEiJ_G0021379	Snai2	100	94.052	ENSLAFG00000009299	SNAI2	100	94.052	Loxodonta_africana
MGP_SPRETEiJ_G0021379	Snai2	99	56.985	ENSLAFG00000005117	SNAI3	99	56.985	Loxodonta_africana
MGP_SPRETEiJ_G0021379	Snai2	99	50.169	ENSMFAG00000032064	SNAI3	99	47.588	Macaca_fascicularis
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSMFAG00000046061	SNAI2	100	95.539	Macaca_fascicularis
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSMMUG00000016195	SNAI2	100	95.539	Macaca_mulatta
MGP_SPRETEiJ_G0021379	Snai2	99	50.169	ENSMMUG00000008716	SNAI3	99	47.588	Macaca_mulatta
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSMNEG00000034216	SNAI2	100	95.539	Macaca_nemestrina
MGP_SPRETEiJ_G0021379	Snai2	99	50.169	ENSMNEG00000045515	SNAI3	99	47.588	Macaca_nemestrina
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSMLEG00000034407	SNAI2	100	95.539	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0021379	Snai2	100	97.026	ENSMAUG00000008119	Snai2	100	97.026	Mesocricetus_auratus
MGP_SPRETEiJ_G0021379	Snai2	99	47.099	ENSMAUG00000001685	Snai3	99	47.099	Mesocricetus_auratus
MGP_SPRETEiJ_G0021379	Snai2	99	48.097	ENSMOCG00000003536	Snai3	99	48.084	Microtus_ochrogaster
MGP_SPRETEiJ_G0021379	Snai2	100	96.654	ENSMOCG00000006622	Snai2	100	96.654	Microtus_ochrogaster
MGP_SPRETEiJ_G0021379	Snai2	100	92.937	ENSMODG00000010173	SNAI2	100	92.937	Monodelphis_domestica
MGP_SPRETEiJ_G0021379	Snai2	99	45.918	MGP_CAROLIEiJ_G0031662	Snai3	99	45.862	Mus_caroli
MGP_SPRETEiJ_G0021379	Snai2	100	99.628	MGP_CAROLIEiJ_G0020483	Snai2	100	99.628	Mus_caroli
MGP_SPRETEiJ_G0021379	Snai2	99	46.599	ENSMUSG00000006587	Snai3	99	46.552	Mus_musculus
MGP_SPRETEiJ_G0021379	Snai2	100	99.628	ENSMUSG00000022676	Snai2	100	99.628	Mus_musculus
MGP_SPRETEiJ_G0021379	Snai2	99	47.099	MGP_PahariEiJ_G0023260	Snai3	99	47.059	Mus_pahari
MGP_SPRETEiJ_G0021379	Snai2	100	99.628	MGP_PahariEiJ_G0016188	Snai2	100	99.628	Mus_pahari
MGP_SPRETEiJ_G0021379	Snai2	99	48.805	ENSMPUG00000008104	SNAI3	99	48.986	Mustela_putorius_furo
MGP_SPRETEiJ_G0021379	Snai2	100	96.283	ENSMPUG00000010793	SNAI2	100	96.283	Mustela_putorius_furo
MGP_SPRETEiJ_G0021379	Snai2	100	94.796	ENSMLUG00000001086	SNAI2	100	94.796	Myotis_lucifugus
MGP_SPRETEiJ_G0021379	Snai2	99	46.309	ENSNGAG00000023039	Snai3	99	47.260	Nannospalax_galili
MGP_SPRETEiJ_G0021379	Snai2	99	50.169	ENSNLEG00000000595	SNAI3	99	46.945	Nomascus_leucogenys
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSNLEG00000013421	SNAI2	100	95.539	Nomascus_leucogenys
MGP_SPRETEiJ_G0021379	Snai2	97	92.748	ENSMEUG00000009510	SNAI2	100	92.748	Notamacropus_eugenii
MGP_SPRETEiJ_G0021379	Snai2	100	92.937	ENSOANG00000007267	SNAI2	100	92.937	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0021379	Snai2	99	48.084	ENSOGAG00000000419	SNAI3	99	48.136	Otolemur_garnettii
MGP_SPRETEiJ_G0021379	Snai2	100	91.078	ENSOARG00000013030	SNAI2	100	91.078	Ovis_aries
MGP_SPRETEiJ_G0021379	Snai2	99	49.492	ENSPPAG00000043301	SNAI3	99	46.302	Pan_paniscus
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSPPAG00000015662	SNAI2	100	95.539	Pan_paniscus
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSPPRG00000012562	-	100	95.539	Panthera_pardus
MGP_SPRETEiJ_G0021379	Snai2	99	46.931	ENSPPRG00000008511	SNAI3	99	46.931	Panthera_pardus
MGP_SPRETEiJ_G0021379	Snai2	90	95.062	ENSPTIG00000007593	SNAI2	77	95.062	Panthera_tigris_altaica
MGP_SPRETEiJ_G0021379	Snai2	99	49.492	ENSPTRG00000008460	SNAI3	99	46.624	Pan_troglodytes
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSPTRG00000020235	SNAI2	100	95.539	Pan_troglodytes
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSPANG00000017540	SNAI2	100	95.539	Papio_anubis
MGP_SPRETEiJ_G0021379	Snai2	99	50.169	ENSPANG00000000509	SNAI3	99	47.588	Papio_anubis
MGP_SPRETEiJ_G0021379	Snai2	99	55.172	ENSPKIG00000007872	SNAI3	99	53.020	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0021379	Snai2	100	82.528	ENSPKIG00000002254	SNAI2	100	85.502	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0021379	Snai2	100	91.822	ENSPSIG00000016395	SNAI2	100	91.822	Pelodiscus_sinensis
MGP_SPRETEiJ_G0021379	Snai2	86	58.120	ENSPSIG00000004262	SNAI3	56	80.986	Pelodiscus_sinensis
MGP_SPRETEiJ_G0021379	Snai2	100	75.836	ENSPMGG00000013179	SNAI2	100	77.323	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0021379	Snai2	100	97.026	ENSPEMG00000011739	Snai2	100	97.026	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0021379	Snai2	100	93.309	ENSPCIG00000025156	SNAI2	100	93.309	Phascolarctos_cinereus
MGP_SPRETEiJ_G0021379	Snai2	90	80.247	ENSPREG00000008528	SNAI2	86	78.601	Poecilia_reticulata
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSPPYG00000018578	SNAI2	100	95.539	Pongo_abelii
MGP_SPRETEiJ_G0021379	Snai2	99	49.013	ENSPPYG00000007643	SNAI3	99	46.945	Pongo_abelii
MGP_SPRETEiJ_G0021379	Snai2	100	95.911	ENSPCOG00000015656	SNAI2	100	95.911	Propithecus_coquereli
MGP_SPRETEiJ_G0021379	Snai2	100	95.167	ENSPVAG00000009457	SNAI2	100	95.167	Pteropus_vampyrus
MGP_SPRETEiJ_G0021379	Snai2	99	45.734	ENSRNOG00000013586	Snai3	99	46.897	Rattus_norvegicus
MGP_SPRETEiJ_G0021379	Snai2	99	49.495	ENSRBIG00000025770	SNAI3	99	47.910	Rhinopithecus_bieti
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSRBIG00000041133	SNAI2	100	95.539	Rhinopithecus_bieti
MGP_SPRETEiJ_G0021379	Snai2	99	47.557	ENSRROG00000032757	SNAI3	99	47.588	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSRROG00000032273	SNAI2	100	95.539	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0021379	Snai2	100	95.539	ENSSBOG00000035774	SNAI2	100	95.539	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0021379	Snai2	100	93.309	ENSSHAG00000004205	SNAI2	100	93.309	Sarcophilus_harrisii
MGP_SPRETEiJ_G0021379	Snai2	100	81.181	ENSSFOG00015018025	SNAI2	100	84.133	Scleropages_formosus
MGP_SPRETEiJ_G0021379	Snai2	99	49.511	ENSSFOG00015016115	snai3	93	50.327	Scleropages_formosus
MGP_SPRETEiJ_G0021379	Snai2	100	91.450	ENSSPUG00000005427	-	100	91.450	Sphenodon_punctatus
MGP_SPRETEiJ_G0021379	Snai2	100	92.937	ENSSSCG00000039568	SNAI2	100	92.937	Sus_scrofa
MGP_SPRETEiJ_G0021379	Snai2	99	46.367	ENSTTRG00000006262	SNAI3	99	46.102	Tursiops_truncatus
MGP_SPRETEiJ_G0021379	Snai2	86	95.671	ENSUAMG00000014942	SNAI2	100	95.671	Ursus_americanus
MGP_SPRETEiJ_G0021379	Snai2	99	51.546	ENSUAMG00000020030	SNAI3	99	47.386	Ursus_americanus
MGP_SPRETEiJ_G0021379	Snai2	98	95.833	ENSUMAG00000006525	SNAI2	100	95.833	Ursus_maritimus
MGP_SPRETEiJ_G0021379	Snai2	99	50.000	ENSVVUG00000003233	SNAI3	99	49.660	Vulpes_vulpes
MGP_SPRETEiJ_G0021379	Snai2	100	95.911	ENSVVUG00000017625	SNAI2	100	95.911	Vulpes_vulpes
MGP_SPRETEiJ_G0021379	Snai2	100	88.848	ENSXETG00000024006	snai2	100	88.848	Xenopus_tropicalis