EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0021437 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 29222 bases
Position: chr16:15181559-15210780
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0042627	dsrm	PF00035.26	7.5e-18	1	2
MGP_SPRETEiJ_P0042627	dsrm	PF00035.26	7.5e-18	2	2
MGP_SPRETEiJ_P0042628	dsrm	PF00035.26	7.5e-18	1	2
MGP_SPRETEiJ_P0042628	dsrm	PF00035.26	7.5e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0042627	-	4249	-	MGP_SPRETEiJ_P0042627	751 (aa)	-	-
MGP_SPRETEiJ_T0042630	-	623	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0042631	-	96	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0042629	-	1110	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0042628	-	4451	-	MGP_SPRETEiJ_P0042628	751 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0021437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0021437's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0021437	-	100	91.591	ENSG00000128191	DGCR8	100	91.591	Homo_sapiens
MGP_SPRETEiJ_G0021437	-	100	93.144	ENSAMEG00000011732	DGCR8	100	93.144	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0021437	-	95	69.605	ENSACIG00000020103	dgcr8	100	67.547	Amphilophus_citrinellus
MGP_SPRETEiJ_G0021437	-	95	70.263	ENSAOCG00000009444	dgcr8	100	68.176	Amphiprion_ocellaris
MGP_SPRETEiJ_G0021437	-	95	70.132	ENSAPEG00000004916	dgcr8	100	68.050	Amphiprion_percula
MGP_SPRETEiJ_G0021437	-	95	70.550	ENSATEG00000015435	dgcr8	100	68.461	Anabas_testudineus
MGP_SPRETEiJ_G0021437	-	100	81.314	ENSAPLG00000004281	DGCR8	100	81.314	Anas_platyrhynchos
MGP_SPRETEiJ_G0021437	-	100	79.124	ENSACAG00000008031	DGCR8	100	79.124	Anolis_carolinensis
MGP_SPRETEiJ_G0021437	-	100	91.203	ENSANAG00000013710	DGCR8	100	91.203	Aotus_nancymaae
MGP_SPRETEiJ_G0021437	-	95	69.634	ENSACLG00000019757	dgcr8	100	69.108	Astatotilapia_calliptera
MGP_SPRETEiJ_G0021437	-	95	70.052	ENSAMXG00000017429	dgcr8	100	68.244	Astyanax_mexicanus
MGP_SPRETEiJ_G0021437	-	100	86.675	ENSBTAG00000019869	DGCR8	100	86.805	Bos_taurus
MGP_SPRETEiJ_G0021437	-	100	91.462	ENSCJAG00000010780	DGCR8	100	91.462	Callithrix_jacchus
MGP_SPRETEiJ_G0021437	-	100	92.885	ENSCAFG00000014196	DGCR8	100	92.885	Canis_familiaris
MGP_SPRETEiJ_G0021437	-	100	92.885	ENSCAFG00020007769	DGCR8	100	92.885	Canis_lupus_dingo
MGP_SPRETEiJ_G0021437	-	100	85.640	ENSCHIG00000019845	DGCR8	100	85.770	Capra_hircus
MGP_SPRETEiJ_G0021437	-	100	91.591	ENSTSYG00000027809	DGCR8	100	91.591	Carlito_syrichta
MGP_SPRETEiJ_G0021437	-	89	100.000	ENSCAPG00000007081	DGCR8	100	100.000	Cavia_aperea
MGP_SPRETEiJ_G0021437	-	100	92.885	ENSCPOG00000002952	DGCR8	100	92.885	Cavia_porcellus
MGP_SPRETEiJ_G0021437	-	100	91.462	ENSCCAG00000036620	DGCR8	100	91.462	Cebus_capucinus
MGP_SPRETEiJ_G0021437	-	100	91.462	ENSCATG00000030676	DGCR8	100	91.462	Cercocebus_atys
MGP_SPRETEiJ_G0021437	-	100	92.497	ENSCLAG00000013910	DGCR8	100	92.497	Chinchilla_lanigera
MGP_SPRETEiJ_G0021437	-	100	91.462	ENSCSAG00000011993	DGCR8	100	91.462	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0021437	-	100	80.749	ENSCPBG00000016973	DGCR8	100	80.749	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0021437	-	100	91.462	ENSCANG00000029485	DGCR8	100	91.462	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0021437	-	100	94.955	ENSCGRG00001000935	-	100	94.955	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0021437	-	100	94.955	ENSCGRG00000005319	-	100	94.955	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0021437	-	95	67.457	ENSCSEG00000011546	dgcr8	100	64.684	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0021437	-	95	69.170	ENSCVAG00000008664	dgcr8	100	67.128	Cyprinodon_variegatus
MGP_SPRETEiJ_G0021437	-	95	69.441	ENSDARG00000035564	dgcr8	100	67.413	Danio_rerio
MGP_SPRETEiJ_G0021437	-	100	90.944	ENSDNOG00000010345	DGCR8	100	90.944	Dasypus_novemcinctus
MGP_SPRETEiJ_G0021437	-	100	92.885	ENSDORG00000028551	-	100	92.885	Dipodomys_ordii
MGP_SPRETEiJ_G0021437	-	74	36.170	FBgn0039861	pasha	91	35.574	Drosophila_melanogaster
MGP_SPRETEiJ_G0021437	-	67	88.750	ENSETEG00000015987	-	68	88.750	Echinops_telfairi
MGP_SPRETEiJ_G0021437	-	68	44.371	ENSEBUG00000011988	dgcr8	87	42.482	Eptatretus_burgeri
MGP_SPRETEiJ_G0021437	-	100	91.591	ENSEASG00005010521	DGCR8	100	91.591	Equus_asinus_asinus
MGP_SPRETEiJ_G0021437	-	100	91.591	ENSECAG00000009295	DGCR8	100	91.591	Equus_caballus
MGP_SPRETEiJ_G0021437	-	87	97.500	ENSEEUG00000011818	DGCR8	87	97.500	Erinaceus_europaeus
MGP_SPRETEiJ_G0021437	-	96	70.557	ENSELUG00000006969	dgcr8	100	68.615	Esox_lucius
MGP_SPRETEiJ_G0021437	-	100	92.367	ENSFCAG00000006801	DGCR8	100	92.367	Felis_catus
MGP_SPRETEiJ_G0021437	-	100	80.799	ENSFALG00000008149	DGCR8	100	80.799	Ficedula_albicollis
MGP_SPRETEiJ_G0021437	-	100	93.144	ENSFDAG00000008236	DGCR8	100	93.144	Fukomys_damarensis
MGP_SPRETEiJ_G0021437	-	95	69.525	ENSFHEG00000007016	dgcr8	99	67.389	Fundulus_heteroclitus
MGP_SPRETEiJ_G0021437	-	95	69.852	ENSGMOG00000007715	dgcr8	100	67.821	Gadus_morhua
MGP_SPRETEiJ_G0021437	-	100	81.057	ENSGALG00000033126	DGCR8	100	81.057	Gallus_gallus
MGP_SPRETEiJ_G0021437	-	95	67.746	ENSGAFG00000006516	dgcr8	100	66.295	Gambusia_affinis
MGP_SPRETEiJ_G0021437	-	95	70.494	ENSGACG00000012975	dgcr8	100	68.367	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0021437	-	100	81.032	ENSGAGG00000024260	DGCR8	100	81.032	Gopherus_agassizii
MGP_SPRETEiJ_G0021437	-	100	91.462	ENSGGOG00000000780	DGCR8	100	91.462	Gorilla_gorilla
MGP_SPRETEiJ_G0021437	-	95	69.634	ENSHBUG00000008555	dgcr8	100	67.584	Haplochromis_burtoni
MGP_SPRETEiJ_G0021437	-	100	92.885	ENSHGLG00000016999	DGCR8	100	92.885	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0021437	-	100	92.885	ENSHGLG00100014468	DGCR8	100	92.885	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0021437	-	100	65.293	ENSHCOG00000003315	dgcr8	100	65.293	Hippocampus_comes
MGP_SPRETEiJ_G0021437	-	95	69.669	ENSIPUG00000016755	DGCR8	99	67.342	Ictalurus_punctatus
MGP_SPRETEiJ_G0021437	-	100	93.014	ENSSTOG00000023936	DGCR8	100	93.014	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0021437	-	100	92.755	ENSJJAG00000014171	-	100	92.755	Jaculus_jaculus
MGP_SPRETEiJ_G0021437	-	95	70.093	ENSKMAG00000009087	dgcr8	99	68.557	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0021437	-	95	67.876	ENSLBEG00000025152	dgcr8	100	66.337	Labrus_bergylta
MGP_SPRETEiJ_G0021437	-	95	73.965	ENSLACG00000017462	DGCR8	99	73.377	Latimeria_chalumnae
MGP_SPRETEiJ_G0021437	-	100	70.781	ENSLOCG00000002491	dgcr8	100	70.781	Lepisosteus_oculatus
MGP_SPRETEiJ_G0021437	-	100	92.626	ENSLAFG00000013724	DGCR8	100	92.626	Loxodonta_africana
MGP_SPRETEiJ_G0021437	-	100	91.332	ENSMFAG00000033708	DGCR8	100	91.332	Macaca_fascicularis
MGP_SPRETEiJ_G0021437	-	100	91.332	ENSMMUG00000020098	DGCR8	100	91.332	Macaca_mulatta
MGP_SPRETEiJ_G0021437	-	100	91.462	ENSMNEG00000009733	DGCR8	100	91.462	Macaca_nemestrina
MGP_SPRETEiJ_G0021437	-	100	91.462	ENSMLEG00000030324	DGCR8	100	91.462	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0021437	-	95	68.707	ENSMAMG00000020856	dgcr8	100	66.883	Mastacembelus_armatus
MGP_SPRETEiJ_G0021437	-	95	69.634	ENSMZEG00005018646	dgcr8	100	67.584	Maylandia_zebra
MGP_SPRETEiJ_G0021437	-	100	74.227	ENSMGAG00000001534	DGCR8	100	74.227	Meleagris_gallopavo
MGP_SPRETEiJ_G0021437	-	100	94.955	ENSMAUG00000000517	-	100	94.955	Mesocricetus_auratus
MGP_SPRETEiJ_G0021437	-	100	91.850	ENSMICG00000030145	DGCR8	100	91.850	Microcebus_murinus
MGP_SPRETEiJ_G0021437	-	100	95.084	ENSMOCG00000014743	-	100	95.084	Microtus_ochrogaster
MGP_SPRETEiJ_G0021437	-	95	70.341	ENSMMOG00000014823	dgcr8	100	68.381	Mola_mola
MGP_SPRETEiJ_G0021437	-	100	79.408	ENSMODG00000010334	DGCR8	100	79.408	Monodelphis_domestica
MGP_SPRETEiJ_G0021437	-	95	68.816	ENSMALG00000015163	dgcr8	99	67.217	Monopterus_albus
MGP_SPRETEiJ_G0021437	-	100	96.248	MGP_CAROLIEiJ_G0020542	-	100	96.248	Mus_caroli
MGP_SPRETEiJ_G0021437	-	100	96.248	ENSMUSG00000022718	Dgcr8	100	96.248	Mus_musculus
MGP_SPRETEiJ_G0021437	-	100	96.248	MGP_PahariEiJ_G0016247	-	100	96.248	Mus_pahari
MGP_SPRETEiJ_G0021437	-	97	92.706	ENSMPUG00000004005	DGCR8	100	92.706	Mustela_putorius_furo
MGP_SPRETEiJ_G0021437	-	100	89.780	ENSMLUG00000017533	DGCR8	100	89.780	Myotis_lucifugus
MGP_SPRETEiJ_G0021437	-	100	94.049	ENSNGAG00000003283	-	100	94.049	Nannospalax_galili
MGP_SPRETEiJ_G0021437	-	95	69.764	ENSNBRG00000002412	dgcr8	100	67.710	Neolamprologus_brichardi
MGP_SPRETEiJ_G0021437	-	100	91.332	ENSNLEG00000005643	DGCR8	100	91.332	Nomascus_leucogenys
MGP_SPRETEiJ_G0021437	-	100	70.930	ENSMEUG00000001041	DGCR8	100	70.930	Notamacropus_eugenii
MGP_SPRETEiJ_G0021437	-	100	89.133	ENSOPRG00000008457	DGCR8	100	89.133	Ochotona_princeps
MGP_SPRETEiJ_G0021437	-	100	92.367	ENSODEG00000016402	DGCR8	100	92.367	Octodon_degus
MGP_SPRETEiJ_G0021437	-	95	71.275	ENSONIG00000011072	dgcr8	100	67.334	Oreochromis_niloticus
MGP_SPRETEiJ_G0021437	-	100	90.427	ENSOCUG00000003612	DGCR8	100	90.427	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0021437	-	95	68.254	ENSORLG00000015160	dgcr8	99	66.284	Oryzias_latipes
MGP_SPRETEiJ_G0021437	-	95	68.700	ENSORLG00020022168	dgcr8	99	66.709	Oryzias_latipes_hni
MGP_SPRETEiJ_G0021437	-	95	68.609	ENSORLG00015012766	dgcr8	100	66.203	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0021437	-	95	67.368	ENSOMEG00000019137	dgcr8	100	64.906	Oryzias_melastigma
MGP_SPRETEiJ_G0021437	-	100	91.850	ENSOGAG00000004851	DGCR8	100	91.850	Otolemur_garnettii
MGP_SPRETEiJ_G0021437	-	100	83.850	ENSOARG00000018063	DGCR8	100	83.979	Ovis_aries
MGP_SPRETEiJ_G0021437	-	100	91.591	ENSPPAG00000039507	DGCR8	100	91.591	Pan_paniscus
MGP_SPRETEiJ_G0021437	-	100	92.238	ENSPPRG00000018958	DGCR8	100	92.238	Panthera_pardus
MGP_SPRETEiJ_G0021437	-	100	92.238	ENSPTIG00000010980	DGCR8	100	92.238	Panthera_tigris_altaica
MGP_SPRETEiJ_G0021437	-	100	91.591	ENSPTRG00000014073	DGCR8	100	91.591	Pan_troglodytes
MGP_SPRETEiJ_G0021437	-	100	91.462	ENSPANG00000019987	DGCR8	100	91.462	Papio_anubis
MGP_SPRETEiJ_G0021437	-	97	70.604	ENSPKIG00000010338	dgcr8	100	69.797	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0021437	-	100	79.742	ENSPSIG00000002300	-	100	79.742	Pelodiscus_sinensis
MGP_SPRETEiJ_G0021437	-	95	69.645	ENSPMGG00000021200	dgcr8	100	67.588	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0021437	-	100	94.955	ENSPEMG00000018266	-	100	94.955	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0021437	-	100	79.587	ENSPCIG00000027728	DGCR8	100	79.587	Phascolarctos_cinereus
MGP_SPRETEiJ_G0021437	-	95	68.057	ENSPFOG00000010796	dgcr8	99	66.625	Poecilia_formosa
MGP_SPRETEiJ_G0021437	-	95	67.885	ENSPLAG00000002812	dgcr8	99	66.456	Poecilia_latipinna
MGP_SPRETEiJ_G0021437	-	95	68.016	ENSPMEG00000024459	dgcr8	99	66.583	Poecilia_mexicana
MGP_SPRETEiJ_G0021437	-	95	67.578	ENSPREG00000018877	dgcr8	100	66.002	Poecilia_reticulata
MGP_SPRETEiJ_G0021437	-	100	91.591	ENSPPYG00000011591	DGCR8	100	91.591	Pongo_abelii
MGP_SPRETEiJ_G0021437	-	100	87.322	ENSPCAG00000015976	DGCR8	100	87.322	Procavia_capensis
MGP_SPRETEiJ_G0021437	-	100	91.979	ENSPCOG00000025377	DGCR8	100	91.979	Propithecus_coquereli
MGP_SPRETEiJ_G0021437	-	100	82.018	ENSPVAG00000015694	DGCR8	100	82.018	Pteropus_vampyrus
MGP_SPRETEiJ_G0021437	-	95	69.634	ENSPNYG00000004486	dgcr8	100	67.584	Pundamilia_nyererei
MGP_SPRETEiJ_G0021437	-	95	70.850	ENSPNAG00000016504	dgcr8	100	69.068	Pygocentrus_nattereri
MGP_SPRETEiJ_G0021437	-	100	95.213	ENSRNOG00000001886	Dgcr8	100	95.213	Rattus_norvegicus
MGP_SPRETEiJ_G0021437	-	100	91.462	ENSRBIG00000015201	DGCR8	100	91.462	Rhinopithecus_bieti
MGP_SPRETEiJ_G0021437	-	100	91.462	ENSRROG00000029948	DGCR8	100	91.462	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0021437	-	100	91.462	ENSSBOG00000022975	DGCR8	100	91.462	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0021437	-	100	79.587	ENSSHAG00000002274	DGCR8	100	79.587	Sarcophilus_harrisii
MGP_SPRETEiJ_G0021437	-	95	72.340	ENSSFOG00015017499	dgcr8	100	70.670	Scleropages_formosus
MGP_SPRETEiJ_G0021437	-	95	70.745	ENSSMAG00000019677	dgcr8	100	68.615	Scophthalmus_maximus
MGP_SPRETEiJ_G0021437	-	95	70.526	ENSSDUG00000002478	dgcr8	100	68.428	Seriola_dumerili
MGP_SPRETEiJ_G0021437	-	95	70.526	ENSSLDG00000015762	dgcr8	100	68.428	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0021437	-	100	91.203	ENSSARG00000009292	DGCR8	100	91.203	Sorex_araneus
MGP_SPRETEiJ_G0021437	-	100	79.587	ENSSPUG00000014967	DGCR8	100	79.587	Sphenodon_punctatus
MGP_SPRETEiJ_G0021437	-	95	70.434	ENSSPAG00000009666	dgcr8	100	68.342	Stegastes_partitus
MGP_SPRETEiJ_G0021437	-	100	90.427	ENSSSCG00000010135	DGCR8	100	90.427	Sus_scrofa
MGP_SPRETEiJ_G0021437	-	95	68.807	ENSTRUG00000013594	dgcr8	100	66.792	Takifugu_rubripes
MGP_SPRETEiJ_G0021437	-	95	70.968	ENSTNIG00000016762	dgcr8	100	68.935	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0021437	-	100	75.679	ENSTBEG00000007196	DGCR8	100	76.067	Tupaia_belangeri
MGP_SPRETEiJ_G0021437	-	100	85.899	ENSTTRG00000008121	DGCR8	100	85.899	Tursiops_truncatus
MGP_SPRETEiJ_G0021437	-	100	92.885	ENSUAMG00000010847	DGCR8	100	92.885	Ursus_americanus
MGP_SPRETEiJ_G0021437	-	100	92.885	ENSUMAG00000007398	DGCR8	100	92.885	Ursus_maritimus
MGP_SPRETEiJ_G0021437	-	100	93.014	ENSVVUG00000025413	DGCR8	100	93.014	Vulpes_vulpes
MGP_SPRETEiJ_G0021437	-	95	76.255	ENSXETG00000006320	dgcr8	100	74.389	Xenopus_tropicalis
MGP_SPRETEiJ_G0021437	-	95	67.839	ENSXCOG00000015141	dgcr8	99	66.415	Xiphophorus_couchianus
MGP_SPRETEiJ_G0021437	-	95	68.010	ENSXMAG00000002426	dgcr8	100	66.169	Xiphophorus_maculatus