EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0021479 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 44723 bases
Position: chr16:17496358-17541080
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0042806	Methyltransf_31	PF13847.6	3e-09	1	1
MGP_SPRETEiJ_P0042808	Methyltransf_31	PF13847.6	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0042807	-	3347	-	MGP_SPRETEiJ_P0042807	883 (aa)	-	-
MGP_SPRETEiJ_T0042806	-	1130	-	MGP_SPRETEiJ_P0042806	255 (aa)	-	-
MGP_SPRETEiJ_T0042812	-	3150	-	MGP_SPRETEiJ_P0042812	765 (aa)	-	-
MGP_SPRETEiJ_T0042813	-	1974	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0042814	-	2501	-	MGP_SPRETEiJ_P0042814	711 (aa)	-	-
MGP_SPRETEiJ_T0042815	-	3040	-	MGP_SPRETEiJ_P0042815	736 (aa)	-	-
MGP_SPRETEiJ_T0042816	-	803	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0042817	-	3418	-	MGP_SPRETEiJ_P0042817	525 (aa)	-	-
MGP_SPRETEiJ_T0042809	-	3430	-	MGP_SPRETEiJ_P0042809	912 (aa)	-	-
MGP_SPRETEiJ_T0042808	-	1462	-	MGP_SPRETEiJ_P0042808	197 (aa)	-	-
MGP_SPRETEiJ_T0042810	-	3154	-	MGP_SPRETEiJ_P0042810	826 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0021479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0021479's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0021479	-	81	31.902	MGP_SPRETEiJ_G0015578	Mettl13	65	32.278

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0021479	-	100	81.961	ENSANAG00000036188	-	100	81.961	Aotus_nancymaae
MGP_SPRETEiJ_G0021479	-	100	81.569	ENSCJAG00000015132	-	100	81.569	Callithrix_jacchus
MGP_SPRETEiJ_G0021479	-	100	82.745	ENSCAFG00000012533	ECE2	100	82.745	Canis_familiaris
MGP_SPRETEiJ_G0021479	-	100	80.784	ENSTSYG00000000069	-	100	80.784	Carlito_syrichta
MGP_SPRETEiJ_G0021479	-	100	79.608	ENSCPOG00000013082	-	100	79.608	Cavia_porcellus
MGP_SPRETEiJ_G0021479	-	100	81.961	ENSCCAG00000023381	-	100	81.961	Cebus_capucinus
MGP_SPRETEiJ_G0021479	-	100	83.137	ENSCATG00000037480	EEF1AKMT4-ECE2	100	83.137	Cercocebus_atys
MGP_SPRETEiJ_G0021479	-	100	79.216	ENSCLAG00000012028	-	100	79.216	Chinchilla_lanigera
MGP_SPRETEiJ_G0021479	-	100	92.157	ENSCGRG00001019837	-	100	92.157	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0021479	-	100	92.157	ENSCGRG00000015498	-	100	92.157	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0021479	-	100	82.353	ENSDORG00000007937	-	100	82.353	Dipodomys_ordii
MGP_SPRETEiJ_G0021479	-	100	79.608	ENSFDAG00000005730	-	100	79.608	Fukomys_damarensis
MGP_SPRETEiJ_G0021479	-	100	82.353	ENSGGOG00000007568	EEF1AKMT4-ECE2	100	82.353	Gorilla_gorilla
MGP_SPRETEiJ_G0021479	-	100	78.824	ENSHGLG00100018093	-	100	78.824	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0021479	-	100	81.569	ENSSTOG00000008215	-	100	81.569	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0021479	-	100	81.569	ENSJJAG00000014145	-	100	81.569	Jaculus_jaculus
MGP_SPRETEiJ_G0021479	-	100	83.137	ENSMFAG00000045351	EEF1AKMT4-ECE2	100	83.137	Macaca_fascicularis
MGP_SPRETEiJ_G0021479	-	100	83.137	ENSMMUG00000018955	EEF1AKMT4-ECE2	100	83.137	Macaca_mulatta
MGP_SPRETEiJ_G0021479	-	100	83.137	ENSMNEG00000041186	EEF1AKMT4-ECE2	100	83.137	Macaca_nemestrina
MGP_SPRETEiJ_G0021479	-	100	83.137	ENSMLEG00000036718	EEF1AKMT4-ECE2	100	83.137	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0021479	-	100	99.216	MGP_CAROLIEiJ_G0020582	-	100	99.216	Mus_caroli
MGP_SPRETEiJ_G0021479	-	100	99.216	MGP_PahariEiJ_G0016286	-	100	99.216	Mus_pahari
MGP_SPRETEiJ_G0021479	-	95	88.066	ENSNGAG00000024299	-	100	86.667	Nannospalax_galili
MGP_SPRETEiJ_G0021479	-	100	82.353	ENSNLEG00000006276	EEF1AKMT4-ECE2	100	82.353	Nomascus_leucogenys
MGP_SPRETEiJ_G0021479	-	100	81.176	ENSODEG00000015263	-	100	81.176	Octodon_degus
MGP_SPRETEiJ_G0021479	-	100	83.529	ENSPPAG00000027988	EEF1AKMT4-ECE2	100	83.529	Pan_paniscus
MGP_SPRETEiJ_G0021479	-	100	83.529	ENSPTRG00000015687	ECE2	100	83.529	Pan_troglodytes
MGP_SPRETEiJ_G0021479	-	100	82.745	ENSPANG00000004695	EEF1AKMT4-ECE2	100	82.745	Papio_anubis
MGP_SPRETEiJ_G0021479	-	100	83.922	ENSPCOG00000027101	-	100	83.922	Propithecus_coquereli
MGP_SPRETEiJ_G0021479	-	100	82.745	ENSRBIG00000036172	EEF1AKMT4-ECE2	100	82.745	Rhinopithecus_bieti
MGP_SPRETEiJ_G0021479	-	100	82.745	ENSRROG00000002110	EEF1AKMT4-ECE2	100	82.745	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0021479	-	100	81.176	ENSSBOG00000032623	-	100	81.176	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0021479	-	100	81.961	ENSSSCG00000025067	-	100	81.961	Sus_scrofa