EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0021625 (Gene tree)
Gene ID: -
Gene Symbol: Polq
Alias: A430110D14Rik
Full Name: polymerase (DNA directed)%2C theta
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 89697 bases
Position: chr16:34841815-34931511
Accession: 2155399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0043402	DEAD	PF00270.29	1e-18	1	1
MGP_SPRETEiJ_P0043401	DEAD	PF00270.29	7.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0043404	-	2973	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0043405	-	2191	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0043400	-	7403	-	MGP_SPRETEiJ_P0043400	177 (aa)	-	-
MGP_SPRETEiJ_T0043401	-	7307	-	MGP_SPRETEiJ_P0043401	2273 (aa)	-	-
MGP_SPRETEiJ_T0043402	-	8569	-	MGP_SPRETEiJ_P0043402	2552 (aa)	-	-
MGP_SPRETEiJ_T0043403	-	1209	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0043399	-	8645	-	MGP_SPRETEiJ_P0043399	177 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0021625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0021625's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0021625	Polq	100	80.465	ENSG00000051341	POLQ	100	72.990	Homo_sapiens
MGP_SPRETEiJ_G0021625	Polq	64	66.706	ENSAPOG00000008650	polq	61	64.439	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0021625	Polq	100	78.704	ENSAMEG00000014870	POLQ	98	71.865	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0021625	Polq	65	64.593	ENSAOCG00000005817	polq	75	64.480	Amphiprion_ocellaris
MGP_SPRETEiJ_G0021625	Polq	61	68.421	ENSAPEG00000020432	polq	75	64.382	Amphiprion_percula
MGP_SPRETEiJ_G0021625	Polq	81	82.581	ENSAPLG00000014869	POLQ	82	82.581	Anas_platyrhynchos
MGP_SPRETEiJ_G0021625	Polq	84	69.187	ENSACAG00000011574	POLQ	93	69.187	Anolis_carolinensis
MGP_SPRETEiJ_G0021625	Polq	97	77.027	ENSANAG00000024407	POLQ	90	77.027	Aotus_nancymaae
MGP_SPRETEiJ_G0021625	Polq	64	66.588	ENSACLG00000013865	polq	57	66.588	Astatotilapia_calliptera
MGP_SPRETEiJ_G0021625	Polq	73	68.539	ENSAMXG00000004839	polq	81	64.157	Astyanax_mexicanus
MGP_SPRETEiJ_G0021625	Polq	98	89.241	ENSBTAG00000001920	POLQ	99	81.881	Bos_taurus
MGP_SPRETEiJ_G0021625	Polq	52	32.841	WBGene00020964	polq-1	70	33.414	Caenorhabditis_elegans
MGP_SPRETEiJ_G0021625	Polq	100	79.186	ENSCJAG00000008508	POLQ	100	72.175	Callithrix_jacchus
MGP_SPRETEiJ_G0021625	Polq	67	88.710	ENSCAFG00000011479	POLQ	85	88.710	Canis_familiaris
MGP_SPRETEiJ_G0021625	Polq	100	76.606	ENSCAFG00020005928	POLQ	100	70.319	Canis_lupus_dingo
MGP_SPRETEiJ_G0021625	Polq	100	80.000	ENSCHIG00000013841	POLQ	89	82.323	Capra_hircus
MGP_SPRETEiJ_G0021625	Polq	89	77.848	ENSTSYG00000009550	POLQ	85	80.556	Carlito_syrichta
MGP_SPRETEiJ_G0021625	Polq	91	86.316	ENSCCAG00000026574	POLQ	99	89.236	Cebus_capucinus
MGP_SPRETEiJ_G0021625	Polq	100	80.365	ENSCATG00000014007	POLQ	95	72.483	Cercocebus_atys
MGP_SPRETEiJ_G0021625	Polq	100	80.465	ENSCLAG00000008388	POLQ	92	80.465	Chinchilla_lanigera
MGP_SPRETEiJ_G0021625	Polq	100	79.186	ENSCSAG00000007239	POLQ	86	79.186	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0021625	Polq	78	91.724	ENSCHOG00000005999	POLQ	77	91.724	Choloepus_hoffmanni
MGP_SPRETEiJ_G0021625	Polq	97	80.645	ENSCPBG00000001827	POLQ	89	80.645	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0021625	Polq	50	57.303	ENSCSAVG00000007277	-	100	46.359	Ciona_savignyi
MGP_SPRETEiJ_G0021625	Polq	99	80.526	ENSCANG00000032946	POLQ	98	72.406	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0021625	Polq	100	85.514	ENSCGRG00001013184	Polq	100	85.514	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0021625	Polq	100	85.514	ENSCGRG00000001328	Polq	100	85.514	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0021625	Polq	64	64.755	ENSCSEG00000005068	polq	59	62.971	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0021625	Polq	60	69.935	ENSCVAG00000019651	polq	76	65.529	Cyprinodon_variegatus
MGP_SPRETEiJ_G0021625	Polq	83	67.841	ENSDARG00000044622	polq	79	67.727	Danio_rerio
MGP_SPRETEiJ_G0021625	Polq	100	70.254	ENSDNOG00000009810	POLQ	99	70.213	Dasypus_novemcinctus
MGP_SPRETEiJ_G0021625	Polq	100	80.000	ENSDORG00000002416	Polq	99	82.723	Dipodomys_ordii
MGP_SPRETEiJ_G0021625	Polq	61	47.826	FBgn0002905	mus308	74	42.746	Drosophila_melanogaster
MGP_SPRETEiJ_G0021625	Polq	95	79.618	ENSETEG00000002958	POLQ	96	79.618	Echinops_telfairi
MGP_SPRETEiJ_G0021625	Polq	52	55.172	ENSEBUG00000007484	POLQ	56	44.181	Eptatretus_burgeri
MGP_SPRETEiJ_G0021625	Polq	96	87.500	ENSEASG00005014326	POLQ	96	88.026	Equus_asinus_asinus
MGP_SPRETEiJ_G0021625	Polq	100	78.027	ENSECAG00000014314	POLQ	100	72.546	Equus_caballus
MGP_SPRETEiJ_G0021625	Polq	83	90.984	ENSEEUG00000001047	POLQ	82	90.984	Erinaceus_europaeus
MGP_SPRETEiJ_G0021625	Polq	54	70.543	ENSELUG00000018460	polq	87	69.366	Esox_lucius
MGP_SPRETEiJ_G0021625	Polq	100	80.734	ENSFCAG00000023397	POLQ	100	71.582	Felis_catus
MGP_SPRETEiJ_G0021625	Polq	75	84.167	ENSFALG00000005269	POLQ	86	73.741	Ficedula_albicollis
MGP_SPRETEiJ_G0021625	Polq	100	81.991	ENSFDAG00000013705	POLQ	90	81.991	Fukomys_damarensis
MGP_SPRETEiJ_G0021625	Polq	67	64.407	ENSFHEG00000009685	polq	60	64.855	Fundulus_heteroclitus
MGP_SPRETEiJ_G0021625	Polq	73	66.456	ENSGMOG00000003509	polq	85	63.287	Gadus_morhua
MGP_SPRETEiJ_G0021625	Polq	79	72.514	ENSGALG00000014924	POLQ	80	72.514	Gallus_gallus
MGP_SPRETEiJ_G0021625	Polq	65	63.036	ENSGAFG00000004642	polq	63	59.830	Gambusia_affinis
MGP_SPRETEiJ_G0021625	Polq	65	69.128	ENSGACG00000016100	polq	92	67.162	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0021625	Polq	87	80.000	ENSGAGG00000013573	POLQ	90	68.146	Gopherus_agassizii
MGP_SPRETEiJ_G0021625	Polq	91	84.434	ENSGGOG00000011565	POLQ	94	85.142	Gorilla_gorilla
MGP_SPRETEiJ_G0021625	Polq	64	66.706	ENSHBUG00000002672	polq	81	60.245	Haplochromis_burtoni
MGP_SPRETEiJ_G0021625	Polq	93	84.404	ENSHGLG00000012935	POLQ	99	78.140	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0021625	Polq	100	77.674	ENSHGLG00100013873	POLQ	100	78.140	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0021625	Polq	83	67.416	ENSIPUG00000001045	polq	83	64.263	Ictalurus_punctatus
MGP_SPRETEiJ_G0021625	Polq	100	80.841	ENSSTOG00000009954	POLQ	90	83.333	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0021625	Polq	64	66.706	ENSKMAG00000000050	polq	73	66.587	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0021625	Polq	62	66.055	ENSLBEG00000003287	-	70	66.055	Labrus_bergylta
MGP_SPRETEiJ_G0021625	Polq	62	66.055	ENSLBEG00000011610	-	70	66.055	Labrus_bergylta
MGP_SPRETEiJ_G0021625	Polq	83	69.283	ENSLOCG00000005709	polq	80	69.170	Lepisosteus_oculatus
MGP_SPRETEiJ_G0021625	Polq	83	83.889	ENSLAFG00000011574	POLQ	88	79.695	Loxodonta_africana
MGP_SPRETEiJ_G0021625	Polq	100	80.365	ENSMFAG00000001627	POLQ	100	72.888	Macaca_fascicularis
MGP_SPRETEiJ_G0021625	Polq	100	80.365	ENSMMUG00000007973	POLQ	100	72.916	Macaca_mulatta
MGP_SPRETEiJ_G0021625	Polq	100	79.909	ENSMNEG00000035186	POLQ	98	72.839	Macaca_nemestrina
MGP_SPRETEiJ_G0021625	Polq	91	81.888	ENSMLEG00000032728	POLQ	94	78.888	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0021625	Polq	64	67.184	ENSMAMG00000000877	polq	57	67.184	Mastacembelus_armatus
MGP_SPRETEiJ_G0021625	Polq	72	61.364	ENSMZEG00005021576	polq	75	65.034	Maylandia_zebra
MGP_SPRETEiJ_G0021625	Polq	55	88.776	ENSMGAG00000014264	POLQ	83	71.958	Meleagris_gallopavo
MGP_SPRETEiJ_G0021625	Polq	89	87.261	ENSMAUG00000015080	-	100	84.663	Mesocricetus_auratus
MGP_SPRETEiJ_G0021625	Polq	100	78.281	ENSMICG00000049493	POLQ	98	72.849	Microcebus_murinus
MGP_SPRETEiJ_G0021625	Polq	100	87.850	ENSMOCG00000016969	Polq	100	87.850	Microtus_ochrogaster
MGP_SPRETEiJ_G0021625	Polq	63	65.917	ENSMMOG00000007373	polq	72	65.917	Mola_mola
MGP_SPRETEiJ_G0021625	Polq	97	84.516	ENSMODG00000018252	POLQ	89	84.516	Monodelphis_domestica
MGP_SPRETEiJ_G0021625	Polq	66	68.421	ENSMALG00000007491	polq	52	68.421	Monopterus_albus
MGP_SPRETEiJ_G0021625	Polq	100	96.610	MGP_CAROLIEiJ_G0020725	Polq	100	96.610	Mus_caroli
MGP_SPRETEiJ_G0021625	Polq	100	98.870	ENSMUSG00000034206	Polq	100	98.870	Mus_musculus
MGP_SPRETEiJ_G0021625	Polq	100	94.210	MGP_PahariEiJ_G0016426	Polq	100	94.210	Mus_pahari
MGP_SPRETEiJ_G0021625	Polq	96	89.516	ENSMPUG00000004980	POLQ	90	89.516	Mustela_putorius_furo
MGP_SPRETEiJ_G0021625	Polq	95	92.784	ENSMLUG00000007687	POLQ	90	92.784	Myotis_lucifugus
MGP_SPRETEiJ_G0021625	Polq	100	84.579	ENSNGAG00000024216	Polq	100	84.579	Nannospalax_galili
MGP_SPRETEiJ_G0021625	Polq	64	69.027	ENSNBRG00000016646	-	77	69.027	Neolamprologus_brichardi
MGP_SPRETEiJ_G0021625	Polq	95	87.368	ENSNLEG00000005179	POLQ	90	87.368	Nomascus_leucogenys
MGP_SPRETEiJ_G0021625	Polq	73	78.462	ENSMEUG00000005314	-	68	81.395	Notamacropus_eugenii
MGP_SPRETEiJ_G0021625	Polq	82	90.164	ENSOPRG00000006048	POLQ	80	90.164	Ochotona_princeps
MGP_SPRETEiJ_G0021625	Polq	94	86.194	ENSODEG00000007851	POLQ	96	86.194	Octodon_degus
MGP_SPRETEiJ_G0021625	Polq	65	66.746	ENSONIG00000008937	polq	85	66.746	Oreochromis_niloticus
MGP_SPRETEiJ_G0021625	Polq	60	77.419	ENSOANG00000004437	-	89	68.200	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0021625	Polq	100	77.419	ENSOCUG00000008077	POLQ	99	70.981	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0021625	Polq	58	73.387	ENSORLG00015004392	polq	67	66.872	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0021625	Polq	59	71.053	ENSOMEG00000012947	polq	60	66.667	Oryzias_melastigma
MGP_SPRETEiJ_G0021625	Polq	100	79.817	ENSOGAG00000015795	POLQ	100	71.016	Otolemur_garnettii
MGP_SPRETEiJ_G0021625	Polq	100	78.829	ENSOARG00000020009	POLQ	84	80.488	Ovis_aries
MGP_SPRETEiJ_G0021625	Polq	100	80.090	ENSPPAG00000027313	POLQ	100	73.052	Pan_paniscus
MGP_SPRETEiJ_G0021625	Polq	100	81.860	ENSPPRG00000007014	POLQ	100	72.203	Panthera_pardus
MGP_SPRETEiJ_G0021625	Polq	100	80.734	ENSPTIG00000017074	POLQ	90	80.734	Panthera_tigris_altaica
MGP_SPRETEiJ_G0021625	Polq	100	80.090	ENSPTRG00000015276	POLQ	100	73.052	Pan_troglodytes
MGP_SPRETEiJ_G0021625	Polq	100	80.365	ENSPANG00000000759	POLQ	95	72.905	Papio_anubis
MGP_SPRETEiJ_G0021625	Polq	68	68.293	ENSPKIG00000015375	polq	69	65.906	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0021625	Polq	68	76.984	ENSPSIG00000013657	POLQ	90	75.543	Pelodiscus_sinensis
MGP_SPRETEiJ_G0021625	Polq	56	71.717	ENSPMGG00000024163	-	59	71.717	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0021625	Polq	100	85.981	ENSPEMG00000017429	Polq	100	79.542	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0021625	Polq	67	64.407	ENSPFOG00000019624	polq	67	61.768	Poecilia_formosa
MGP_SPRETEiJ_G0021625	Polq	67	63.559	ENSPLAG00000022900	polq	57	61.383	Poecilia_latipinna
MGP_SPRETEiJ_G0021625	Polq	67	62.712	ENSPREG00000006445	polq	63	61.416	Poecilia_reticulata
MGP_SPRETEiJ_G0021625	Polq	100	81.395	ENSPPYG00000013498	POLQ	100	72.836	Pongo_abelii
MGP_SPRETEiJ_G0021625	Polq	91	85.024	ENSPCOG00000024680	POLQ	100	84.475	Propithecus_coquereli
MGP_SPRETEiJ_G0021625	Polq	98	78.095	ENSPVAG00000003165	POLQ	83	81.429	Pteropus_vampyrus
MGP_SPRETEiJ_G0021625	Polq	81	70.225	ENSPNAG00000003089	polq	77	67.910	Pygocentrus_nattereri
MGP_SPRETEiJ_G0021625	Polq	99	90.374	ENSRNOG00000002471	Polq	99	87.293	Rattus_norvegicus
MGP_SPRETEiJ_G0021625	Polq	97	84.000	ENSRBIG00000023391	POLQ	100	84.706	Rhinopithecus_bieti
MGP_SPRETEiJ_G0021625	Polq	100	79.452	ENSRROG00000045280	POLQ	100	72.504	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0021625	Polq	97	84.516	ENSSHAG00000006984	POLQ	89	84.516	Sarcophilus_harrisii
MGP_SPRETEiJ_G0021625	Polq	88	59.873	ENSSFOG00015013674	polq	69	68.310	Scleropages_formosus
MGP_SPRETEiJ_G0021625	Polq	64	66.389	ENSSMAG00000011427	polq	58	66.389	Scophthalmus_maximus
MGP_SPRETEiJ_G0021625	Polq	64	66.269	ENSSDUG00000022307	polq	74	66.269	Seriola_dumerili
MGP_SPRETEiJ_G0021625	Polq	64	66.667	ENSSLDG00000024994	polq	74	66.667	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0021625	Polq	88	91.250	ENSSARG00000001970	POLQ	86	91.250	Sorex_araneus
MGP_SPRETEiJ_G0021625	Polq	99	75.000	ENSSPUG00000004529	POLQ	82	84.768	Sphenodon_punctatus
MGP_SPRETEiJ_G0021625	Polq	65	66.627	ENSSPAG00000021010	polq	74	64.948	Stegastes_partitus
MGP_SPRETEiJ_G0021625	Polq	100	76.923	ENSSSCG00000036613	POLQ	100	71.073	Sus_scrofa
MGP_SPRETEiJ_G0021625	Polq	56	84.848	ENSTGUG00000015582	-	100	84.848	Taeniopygia_guttata
MGP_SPRETEiJ_G0021625	Polq	90	78.205	ENSTGUG00000013371	-	83	78.205	Taeniopygia_guttata
MGP_SPRETEiJ_G0021625	Polq	52	75.000	ENSTRUG00000023027	-	81	75.000	Takifugu_rubripes
MGP_SPRETEiJ_G0021625	Polq	53	73.404	ENSTNIG00000017816	-	99	66.469	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0021625	Polq	80	90.000	ENSTTRG00000001348	POLQ	69	90.000	Tursiops_truncatus
MGP_SPRETEiJ_G0021625	Polq	89	79.114	ENSUAMG00000009373	-	88	77.778	Ursus_americanus
MGP_SPRETEiJ_G0021625	Polq	94	75.882	ENSUAMG00000012910	-	89	75.163	Ursus_americanus
MGP_SPRETEiJ_G0021625	Polq	100	73.778	ENSUMAG00000025251	POLQ	98	71.423	Ursus_maritimus
MGP_SPRETEiJ_G0021625	Polq	95	89.224	ENSVVUG00000022390	POLQ	99	86.838	Vulpes_vulpes
MGP_SPRETEiJ_G0021625	Polq	83	71.836	ENSXETG00000009913	polq	84	70.903	Xenopus_tropicalis
MGP_SPRETEiJ_G0021625	Polq	60	63.793	ENSXCOG00000013713	-	64	63.793	Xiphophorus_couchianus
MGP_SPRETEiJ_G0021625	Polq	65	65.041	ENSXMAG00000012597	polq	63	61.661	Xiphophorus_maculatus