EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0021712 (Gene tree)
Gene ID: -
Gene Symbol: Trmt10c
Alias: 1300018J16Rik|D16Ertd454e|Rg9mtd1
Full Name: tRNA methyltransferase 10C
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 5220 bases
Position: chr16:54383775-54388994
Accession: 1196261
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0043753	tRNA_m1G_MT	PF01746.21	4.7e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0043753	-	2990	-	MGP_SPRETEiJ_P0043753	414 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0021712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0021712's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0021712	Trmt10c	57	30.417	ENSG00000165275	TRMT10B	84	31.183	Homo_sapiens
MGP_SPRETEiJ_G0021712	Trmt10c	96	77.444	ENSG00000174173	TRMT10C	99	77.444	Homo_sapiens
MGP_SPRETEiJ_G0021712	Trmt10c	61	51.938	ENSAPOG00000003883	trmt10c	74	51.938	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0021712	Trmt10c	98	76.238	ENSAMEG00000019657	TRMT10C	98	76.238	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0021712	Trmt10c	54	30.837	ENSAOCG00000001205	trmt10b	72	30.837	Amphiprion_ocellaris
MGP_SPRETEiJ_G0021712	Trmt10c	56	56.223	ENSAOCG00000005855	trmt10c	70	54.321	Amphiprion_ocellaris
MGP_SPRETEiJ_G0021712	Trmt10c	56	56.652	ENSAPEG00000021992	trmt10c	70	54.733	Amphiprion_percula
MGP_SPRETEiJ_G0021712	Trmt10c	89	49.867	ENSATEG00000012576	trmt10c	94	48.800	Anabas_testudineus
MGP_SPRETEiJ_G0021712	Trmt10c	80	54.381	ENSAPLG00000011561	TRMT10C	83	53.274	Anas_platyrhynchos
MGP_SPRETEiJ_G0021712	Trmt10c	81	54.971	ENSACAG00000011903	TRMT10C	78	54.942	Anolis_carolinensis
MGP_SPRETEiJ_G0021712	Trmt10c	97	45.036	ENSACLG00000024269	trmt10c	97	45.763	Astatotilapia_calliptera
MGP_SPRETEiJ_G0021712	Trmt10c	59	30.588	ENSACLG00000013678	trmt10b	64	32.020	Astatotilapia_calliptera
MGP_SPRETEiJ_G0021712	Trmt10c	83	49.288	ENSAMXG00000014749	trmt10c	83	49.573	Astyanax_mexicanus
MGP_SPRETEiJ_G0021712	Trmt10c	99	75.061	ENSBTAG00000024027	TRMT10C	97	75.061	Bos_taurus
MGP_SPRETEiJ_G0021712	Trmt10c	100	72.048	ENSCAFG00000031607	TRMT10C	98	72.048	Canis_familiaris
MGP_SPRETEiJ_G0021712	Trmt10c	100	72.048	ENSCAFG00020008862	TRMT10C	98	72.048	Canis_lupus_dingo
MGP_SPRETEiJ_G0021712	Trmt10c	99	75.061	ENSCHIG00000021446	TRMT10C	96	75.061	Capra_hircus
MGP_SPRETEiJ_G0021712	Trmt10c	57	30.000	ENSCATG00000032196	TRMT10B	84	30.645	Cercocebus_atys
MGP_SPRETEiJ_G0021712	Trmt10c	99	74.092	ENSCLAG00000017738	TRMT10C	98	74.092	Chinchilla_lanigera
MGP_SPRETEiJ_G0021712	Trmt10c	57	30.000	ENSCSAG00000010828	TRMT10B	58	30.435	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0021712	Trmt10c	96	79.449	ENSCSAG00000018722	TRMT10C	99	79.449	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0021712	Trmt10c	92	75.393	ENSCHOG00000010108	TRMT10C	98	75.916	Choloepus_hoffmanni
MGP_SPRETEiJ_G0021712	Trmt10c	100	78.554	ENSCGRG00001006603	Trmt10c	100	78.554	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0021712	Trmt10c	100	78.554	ENSCGRG00000019728	Trmt10c	100	78.554	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0021712	Trmt10c	88	45.220	ENSCSEG00000006163	trmt10c	77	46.134	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0021712	Trmt10c	82	48.361	ENSCVAG00000013751	trmt10c	72	47.107	Cyprinodon_variegatus
MGP_SPRETEiJ_G0021712	Trmt10c	50	33.488	ENSCVAG00000014204	trmt10b	64	33.488	Cyprinodon_variegatus
MGP_SPRETEiJ_G0021712	Trmt10c	54	30.702	ENSDARG00000060176	trmt10b	71	30.531	Danio_rerio
MGP_SPRETEiJ_G0021712	Trmt10c	81	48.837	ENSDARG00000041575	trmt10c	85	48.703	Danio_rerio
MGP_SPRETEiJ_G0021712	Trmt10c	100	71.014	ENSDNOG00000012650	TRMT10C	99	71.014	Dasypus_novemcinctus
MGP_SPRETEiJ_G0021712	Trmt10c	99	75.550	ENSDORG00000027529	Trmt10c	100	74.879	Dipodomys_ordii
MGP_SPRETEiJ_G0021712	Trmt10c	74	35.826	FBgn0034351	rswl	71	35.826	Drosophila_melanogaster
MGP_SPRETEiJ_G0021712	Trmt10c	77	34.591	ENSEBUG00000015332	trmt10c	75	33.648	Eptatretus_burgeri
MGP_SPRETEiJ_G0021712	Trmt10c	100	79.518	ENSEASG00005011186	TRMT10C	99	79.518	Equus_asinus_asinus
MGP_SPRETEiJ_G0021712	Trmt10c	100	79.759	ENSECAG00000001533	TRMT10C	99	79.759	Equus_caballus
MGP_SPRETEiJ_G0021712	Trmt10c	96	71.820	ENSEEUG00000004696	TRMT10C	99	71.820	Erinaceus_europaeus
MGP_SPRETEiJ_G0021712	Trmt10c	57	30.417	ENSEEUG00000000259	TRMT10B	67	30.045	Erinaceus_europaeus
MGP_SPRETEiJ_G0021712	Trmt10c	85	51.648	ENSELUG00000002553	trmt10c	85	51.923	Esox_lucius
MGP_SPRETEiJ_G0021712	Trmt10c	98	76.471	ENSFCAG00000003430	TRMT10C	96	76.471	Felis_catus
MGP_SPRETEiJ_G0021712	Trmt10c	86	53.073	ENSFALG00000014236	TRMT10C	88	51.200	Ficedula_albicollis
MGP_SPRETEiJ_G0021712	Trmt10c	99	73.544	ENSFDAG00000001576	TRMT10C	96	73.544	Fukomys_damarensis
MGP_SPRETEiJ_G0021712	Trmt10c	80	49.721	ENSFHEG00000015379	trmt10c	71	49.721	Fundulus_heteroclitus
MGP_SPRETEiJ_G0021712	Trmt10c	79	50.305	ENSGMOG00000008573	trmt10c	95	50.305	Gadus_morhua
MGP_SPRETEiJ_G0021712	Trmt10c	86	51.639	ENSGALG00000015328	TRMT10C	87	50.407	Gallus_gallus
MGP_SPRETEiJ_G0021712	Trmt10c	52	60.185	ENSGAFG00000012256	trmt10c	69	60.185	Gambusia_affinis
MGP_SPRETEiJ_G0021712	Trmt10c	92	48.205	ENSGACG00000015281	trmt10c	95	48.196	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0021712	Trmt10c	95	51.741	ENSGAGG00000022825	TRMT10C	94	52.217	Gopherus_agassizii
MGP_SPRETEiJ_G0021712	Trmt10c	96	77.193	ENSGGOG00000006484	TRMT10C	99	77.193	Gorilla_gorilla
MGP_SPRETEiJ_G0021712	Trmt10c	52	55.814	ENSHBUG00000000010	trmt10c	72	52.966	Haplochromis_burtoni
MGP_SPRETEiJ_G0021712	Trmt10c	98	73.529	ENSHGLG00000019767	TRMT10C	98	74.755	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0021712	Trmt10c	98	73.529	ENSHGLG00100020191	TRMT10C	98	74.755	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0021712	Trmt10c	50	58.654	ENSHCOG00000003493	trmt10c	78	56.744	Hippocampus_comes
MGP_SPRETEiJ_G0021712	Trmt10c	78	52.632	ENSIPUG00000010010	trmt10c	70	53.488	Ictalurus_punctatus
MGP_SPRETEiJ_G0021712	Trmt10c	58	30.677	ENSIPUG00000008246	trmt10b	78	31.148	Ictalurus_punctatus
MGP_SPRETEiJ_G0021712	Trmt10c	98	78.133	ENSSTOG00000012199	TRMT10C	97	78.133	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0021712	Trmt10c	79	50.595	ENSKMAG00000022027	trmt10c	78	49.702	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0021712	Trmt10c	84	46.774	ENSLBEG00000013143	trmt10c	75	46.467	Labrus_bergylta
MGP_SPRETEiJ_G0021712	Trmt10c	77	56.832	ENSLACG00000002036	TRMT10C	84	57.407	Latimeria_chalumnae
MGP_SPRETEiJ_G0021712	Trmt10c	88	50.663	ENSLOCG00000017802	trmt10c	85	50.663	Lepisosteus_oculatus
MGP_SPRETEiJ_G0021712	Trmt10c	100	75.904	ENSLAFG00000009677	TRMT10C	100	75.904	Loxodonta_africana
MGP_SPRETEiJ_G0021712	Trmt10c	57	30.000	ENSMFAG00000032455	TRMT10B	84	30.645	Macaca_fascicularis
MGP_SPRETEiJ_G0021712	Trmt10c	99	78.780	ENSMMUG00000017780	TRMT10C	97	78.780	Macaca_mulatta
MGP_SPRETEiJ_G0021712	Trmt10c	57	30.000	ENSMMUG00000008662	TRMT10B	66	31.847	Macaca_mulatta
MGP_SPRETEiJ_G0021712	Trmt10c	57	30.000	ENSMNEG00000033400	TRMT10B	84	30.645	Macaca_nemestrina
MGP_SPRETEiJ_G0021712	Trmt10c	57	30.000	ENSMLEG00000035135	TRMT10B	84	30.645	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0021712	Trmt10c	53	55.656	ENSMAMG00000003124	trmt10c	66	55.656	Mastacembelus_armatus
MGP_SPRETEiJ_G0021712	Trmt10c	52	55.814	ENSMZEG00005000671	trmt10c	65	55.814	Maylandia_zebra
MGP_SPRETEiJ_G0021712	Trmt10c	55	30.932	ENSMZEG00005020927	trmt10b	59	32.609	Maylandia_zebra
MGP_SPRETEiJ_G0021712	Trmt10c	60	54.618	ENSMGAG00000014375	TRMT10C	89	57.576	Meleagris_gallopavo
MGP_SPRETEiJ_G0021712	Trmt10c	100	82.850	ENSMAUG00000009904	Trmt10c	100	82.850	Mesocricetus_auratus
MGP_SPRETEiJ_G0021712	Trmt10c	100	82.892	ENSMOCG00000020572	Trmt10c	100	82.892	Microtus_ochrogaster
MGP_SPRETEiJ_G0021712	Trmt10c	59	52.459	ENSMMOG00000018106	trmt10c	67	54.077	Mola_mola
MGP_SPRETEiJ_G0021712	Trmt10c	99	56.039	ENSMODG00000025175	TRMT10C	98	56.039	Monodelphis_domestica
MGP_SPRETEiJ_G0021712	Trmt10c	86	45.789	ENSMALG00000016236	trmt10c	77	46.174	Monopterus_albus
MGP_SPRETEiJ_G0021712	Trmt10c	100	99.034	MGP_CAROLIEiJ_G0020812	Trmt10c	100	99.034	Mus_caroli
MGP_SPRETEiJ_G0021712	Trmt10c	100	99.275	ENSMUSG00000044763	Trmt10c	100	99.275	Mus_musculus
MGP_SPRETEiJ_G0021712	Trmt10c	100	95.169	MGP_PahariEiJ_G0016512	Trmt10c	100	95.169	Mus_pahari
MGP_SPRETEiJ_G0021712	Trmt10c	98	76.904	ENSMPUG00000019979	TRMT10C	96	76.904	Mustela_putorius_furo
MGP_SPRETEiJ_G0021712	Trmt10c	99	75.000	ENSMLUG00000030097	-	98	75.000	Myotis_lucifugus
MGP_SPRETEiJ_G0021712	Trmt10c	100	75.422	ENSMLUG00000028638	-	100	75.422	Myotis_lucifugus
MGP_SPRETEiJ_G0021712	Trmt10c	100	80.241	ENSNGAG00000022215	Trmt10c	100	80.241	Nannospalax_galili
MGP_SPRETEiJ_G0021712	Trmt10c	50	57.692	ENSNBRG00000017903	trmt10c	79	57.692	Neolamprologus_brichardi
MGP_SPRETEiJ_G0021712	Trmt10c	57	30.000	ENSNLEG00000003542	TRMT10B	84	30.645	Nomascus_leucogenys
MGP_SPRETEiJ_G0021712	Trmt10c	96	76.942	ENSOPRG00000007388	TRMT10C	99	76.942	Ochotona_princeps
MGP_SPRETEiJ_G0021712	Trmt10c	80	49.280	ENSONIG00000003128	trmt10c	91	50.146	Oreochromis_niloticus
MGP_SPRETEiJ_G0021712	Trmt10c	89	53.175	ENSOANG00000007508	TRMT10C	100	54.497	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0021712	Trmt10c	99	75.306	ENSOCUG00000011103	TRMT10C	96	75.306	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0021712	Trmt10c	80	50.708	ENSORLG00000004992	trmt10c	70	50.708	Oryzias_latipes
MGP_SPRETEiJ_G0021712	Trmt10c	80	50.708	ENSORLG00020016083	trmt10c	70	50.708	Oryzias_latipes_hni
MGP_SPRETEiJ_G0021712	Trmt10c	80	50.425	ENSORLG00015014590	trmt10c	70	50.425	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0021712	Trmt10c	51	59.155	ENSOMEG00000016820	trmt10c	77	59.155	Oryzias_melastigma
MGP_SPRETEiJ_G0021712	Trmt10c	100	74.038	ENSOGAG00000001819	TRMT10C	100	74.038	Otolemur_garnettii
MGP_SPRETEiJ_G0021712	Trmt10c	99	76.039	ENSOARG00000001677	TRMT10C	96	76.039	Ovis_aries
MGP_SPRETEiJ_G0021712	Trmt10c	57	30.417	ENSPPAG00000036969	TRMT10B	84	31.183	Pan_paniscus
MGP_SPRETEiJ_G0021712	Trmt10c	99	76.284	ENSPTIG00000002271	TRMT10C	97	76.284	Panthera_tigris_altaica
MGP_SPRETEiJ_G0021712	Trmt10c	96	77.193	ENSPTRG00000015171	TRMT10C	99	77.193	Pan_troglodytes
MGP_SPRETEiJ_G0021712	Trmt10c	57	30.417	ENSPTRG00000020951	TRMT10B	84	31.183	Pan_troglodytes
MGP_SPRETEiJ_G0021712	Trmt10c	96	77.193	ENSPTRG00000051763	-	99	77.193	Pan_troglodytes
MGP_SPRETEiJ_G0021712	Trmt10c	57	30.000	ENSPANG00000025571	TRMT10B	84	30.645	Papio_anubis
MGP_SPRETEiJ_G0021712	Trmt10c	94	48.010	ENSPKIG00000010307	trmt10c	84	46.535	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0021712	Trmt10c	82	58.997	ENSPSIG00000004052	TRMT10C	83	59.357	Pelodiscus_sinensis
MGP_SPRETEiJ_G0021712	Trmt10c	52	55.349	ENSPMGG00000001599	trmt10c	75	55.349	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0021712	Trmt10c	100	85.024	ENSPEMG00000006986	Trmt10c	100	85.024	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0021712	Trmt10c	99	55.635	ENSPCIG00000016080	TRMT10C	98	55.635	Phascolarctos_cinereus
MGP_SPRETEiJ_G0021712	Trmt10c	65	30.182	ENSPFOG00000005390	trmt10b	71	30.396	Poecilia_formosa
MGP_SPRETEiJ_G0021712	Trmt10c	80	51.594	ENSPFOG00000009282	trmt10c	85	51.873	Poecilia_formosa
MGP_SPRETEiJ_G0021712	Trmt10c	55	55.556	ENSPLAG00000010774	trmt10c	84	55.556	Poecilia_latipinna
MGP_SPRETEiJ_G0021712	Trmt10c	65	30.182	ENSPLAG00000004405	trmt10b	71	30.396	Poecilia_latipinna
MGP_SPRETEiJ_G0021712	Trmt10c	65	30.182	ENSPMEG00000012573	trmt10b	71	30.396	Poecilia_mexicana
MGP_SPRETEiJ_G0021712	Trmt10c	52	57.604	ENSPMEG00000023060	trmt10c	76	57.604	Poecilia_mexicana
MGP_SPRETEiJ_G0021712	Trmt10c	86	48.837	ENSPREG00000021808	trmt10c	76	48.062	Poecilia_reticulata
MGP_SPRETEiJ_G0021712	Trmt10c	99	76.829	ENSPPYG00000013592	TRMT10C	96	76.829	Pongo_abelii
MGP_SPRETEiJ_G0021712	Trmt10c	96	75.940	ENSPCAG00000001290	TRMT10C	99	75.940	Procavia_capensis
MGP_SPRETEiJ_G0021712	Trmt10c	96	76.633	ENSPVAG00000009885	TRMT10C	99	76.633	Pteropus_vampyrus
MGP_SPRETEiJ_G0021712	Trmt10c	84	47.887	ENSPNYG00000003607	trmt10c	81	48.732	Pundamilia_nyererei
MGP_SPRETEiJ_G0021712	Trmt10c	58	30.279	ENSPNAG00000020605	trmt10b	79	30.738	Pygocentrus_nattereri
MGP_SPRETEiJ_G0021712	Trmt10c	52	60.185	ENSPNAG00000010519	trmt10c	72	58.222	Pygocentrus_nattereri
MGP_SPRETEiJ_G0021712	Trmt10c	100	90.338	ENSRNOG00000039567	Trmt10c	100	90.338	Rattus_norvegicus
MGP_SPRETEiJ_G0021712	Trmt10c	57	30.000	ENSRBIG00000029751	TRMT10B	84	30.645	Rhinopithecus_bieti
MGP_SPRETEiJ_G0021712	Trmt10c	57	30.000	ENSRROG00000036392	TRMT10B	84	30.645	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0021712	Trmt10c	93	77.202	ENSSBOG00000023326	TRMT10C	100	77.202	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0021712	Trmt10c	99	54.676	ENSSHAG00000008854	TRMT10C	97	54.676	Sarcophilus_harrisii
MGP_SPRETEiJ_G0021712	Trmt10c	81	51.282	ENSSFOG00015008704	trmt10c	79	51.282	Scleropages_formosus
MGP_SPRETEiJ_G0021712	Trmt10c	92	45.012	ENSSMAG00000021322	trmt10c	77	46.633	Scophthalmus_maximus
MGP_SPRETEiJ_G0021712	Trmt10c	90	44.697	ENSSDUG00000006430	trmt10c	86	43.405	Seriola_dumerili
MGP_SPRETEiJ_G0021712	Trmt10c	63	51.341	ENSSLDG00000001023	trmt10c	79	52.778	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0021712	Trmt10c	96	76.190	ENSSARG00000014342	TRMT10C	99	76.190	Sorex_araneus
MGP_SPRETEiJ_G0021712	Trmt10c	80	54.491	ENSSPUG00000018495	TRMT10C	81	54.491	Sphenodon_punctatus
MGP_SPRETEiJ_G0021712	Trmt10c	92	47.287	ENSSPAG00000016082	trmt10c	81	52.648	Stegastes_partitus
MGP_SPRETEiJ_G0021712	Trmt10c	99	76.570	ENSSSCG00000011956	TRMT10C	99	76.570	Sus_scrofa
MGP_SPRETEiJ_G0021712	Trmt10c	80	56.156	ENSTGUG00000013621	TRMT10C	99	56.156	Taeniopygia_guttata
MGP_SPRETEiJ_G0021712	Trmt10c	67	51.579	ENSTRUG00000024252	trmt10c	85	51.579	Takifugu_rubripes
MGP_SPRETEiJ_G0021712	Trmt10c	86	47.425	ENSTNIG00000009440	trmt10c	98	46.883	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0021712	Trmt10c	96	76.692	ENSTBEG00000013894	TRMT10C	99	76.692	Tupaia_belangeri
MGP_SPRETEiJ_G0021712	Trmt10c	95	77.215	ENSTTRG00000015004	TRMT10C	98	77.215	Tursiops_truncatus
MGP_SPRETEiJ_G0021712	Trmt10c	99	76.585	ENSUAMG00000017378	TRMT10C	99	76.585	Ursus_americanus
MGP_SPRETEiJ_G0021712	Trmt10c	99	76.585	ENSUMAG00000003252	TRMT10C	99	76.585	Ursus_maritimus
MGP_SPRETEiJ_G0021712	Trmt10c	100	73.671	ENSVVUG00000021735	TRMT10C	94	73.671	Vulpes_vulpes
MGP_SPRETEiJ_G0021712	Trmt10c	80	54.217	ENSXETG00000029921	trmt10c	85	61.261	Xenopus_tropicalis
MGP_SPRETEiJ_G0021712	Trmt10c	68	53.103	ENSXCOG00000002876	trmt10c	94	53.265	Xiphophorus_couchianus
MGP_SPRETEiJ_G0021712	Trmt10c	80	50.278	ENSXMAG00000019205	trmt10c	71	50.693	Xiphophorus_maculatus