EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0021857 (Gene tree)
Gene ID
-
Gene Symbol
Synj1
Alias
A930006D20Rik
Full Name
synaptojanin 1
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Minus strand
Length
76662 bases
Position
chr16:90337639-90414300
Accession
1354961
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0044138Exo_endo_phosPF03372.231.1e-1411
MGP_SPRETEiJ_P0044140Exo_endo_phosPF03372.231.1e-1411
MGP_SPRETEiJ_P0044137Exo_endo_phosPF03372.231.5e-1411
MGP_SPRETEiJ_P0044145Exo_endo_phosPF03372.232.6e-0711
MGP_SPRETEiJ_P0044138DUF1866PF08952.111.5e-5711
MGP_SPRETEiJ_P0044140DUF1866PF08952.111.5e-5711
MGP_SPRETEiJ_P0044137DUF1866PF08952.111.7e-5711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0044139-3472-MGP_SPRETEiJ_P0044139188 (aa)--
MGP_SPRETEiJ_T0044138-6983-MGP_SPRETEiJ_P00441381309 (aa)--
MGP_SPRETEiJ_T0044137-7062-MGP_SPRETEiJ_P00441371607 (aa)--
MGP_SPRETEiJ_T0044140-4771-MGP_SPRETEiJ_P00441401323 (aa)--
MGP_SPRETEiJ_T0044141-772--- (aa)--
MGP_SPRETEiJ_T0044142-547-MGP_SPRETEiJ_P0044142103 (aa)-UPI0001889C62
MGP_SPRETEiJ_T0044143-354-MGP_SPRETEiJ_P0044143117 (aa)--
MGP_SPRETEiJ_T0044144-2743--- (aa)--
MGP_SPRETEiJ_T0044145-2189-MGP_SPRETEiJ_P0044145693 (aa)--
MGP_SPRETEiJ_T0044146-947--- (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0021857's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0021857's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0021857Synj110060.057MGP_SPRETEiJ_G0021931Synj29959.581
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0021857Synj110097.691ENSG00000159082SYNJ110097.191Homo_sapiens
MGP_SPRETEiJ_G0021857Synj110083.597ENSAPOG00000002809synj19769.851Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0021857Synj110096.006ENSAMEG00000015028SYNJ110088.119Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0021857Synj110079.712ENSACIG00000008857synj19566.390Amphilophus_citrinellus
MGP_SPRETEiJ_G0021857Synj110083.022ENSAOCG00000009835synj19568.882Amphiprion_ocellaris
MGP_SPRETEiJ_G0021857Synj110083.022ENSAPEG00000021010synj19061.253Amphiprion_percula
MGP_SPRETEiJ_G0021857Synj110082.446ENSATEG00000002306synj18762.467Anabas_testudineus
MGP_SPRETEiJ_G0021857Synj110091.619ENSAPLG00000011832SYNJ110077.917Anas_platyrhynchos
MGP_SPRETEiJ_G0021857Synj110090.728ENSACAG00000003006-10083.612Anolis_carolinensis
MGP_SPRETEiJ_G0021857Synj110097.403ENSANAG00000027325SYNJ110092.841Aotus_nancymaae
MGP_SPRETEiJ_G0021857Synj110082.734ENSACLG00000002255synj19867.481Astatotilapia_calliptera
MGP_SPRETEiJ_G0021857Synj110083.190ENSAMXG00000008208synj19560.222Astyanax_mexicanus
MGP_SPRETEiJ_G0021857Synj110097.547ENSBTAG00000003063SYNJ110092.197Bos_taurus
MGP_SPRETEiJ_G0021857Synj110097.980ENSCJAG00000009187SYNJ110092.841Callithrix_jacchus
MGP_SPRETEiJ_G0021857Synj110097.258ENSCAFG00000009041SYNJ110087.762Canis_familiaris
MGP_SPRETEiJ_G0021857Synj110097.691ENSCAFG00020025776SYNJ19887.681Canis_lupus_dingo
MGP_SPRETEiJ_G0021857Synj110097.691ENSCHIG00000005095SYNJ110084.659Capra_hircus
MGP_SPRETEiJ_G0021857Synj110097.403ENSTSYG00000014541SYNJ110091.921Carlito_syrichta
MGP_SPRETEiJ_G0021857Synj18987.879ENSCAPG00000014483SYNJ19977.085Cavia_aperea
MGP_SPRETEiJ_G0021857Synj110097.835ENSCPOG00000012182SYNJ110093.216Cavia_porcellus
MGP_SPRETEiJ_G0021857Synj110097.403ENSCCAG00000020825SYNJ110092.460Cebus_capucinus
MGP_SPRETEiJ_G0021857Synj110097.835ENSCATG00000033891SYNJ110092.835Cercocebus_atys
MGP_SPRETEiJ_G0021857Synj110097.547ENSCLAG00000009796SYNJ110097.547Chinchilla_lanigera
MGP_SPRETEiJ_G0021857Synj110096.148ENSCSAG00000009654SYNJ110093.902Chlorocebus_sabaeus
MGP_SPRETEiJ_G0021857Synj183100.000ENSCHOG00000012390SYNJ18790.228Choloepus_hoffmanni
MGP_SPRETEiJ_G0021857Synj110093.795ENSCPBG00000006402SYNJ19787.783Chrysemys_picta_bellii
MGP_SPRETEiJ_G0021857Synj110097.835ENSCANG00000031359SYNJ110092.835Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0021857Synj110098.413ENSCGRG00001010861Synj110096.180Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0021857Synj110098.413ENSCGRG00000015749Synj110098.413Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0021857Synj110081.223ENSCSEG00000019614synj19969.015Cynoglossus_semilaevis
MGP_SPRETEiJ_G0021857Synj110077.641ENSCVAG00000019250synj19567.412Cyprinodon_variegatus
MGP_SPRETEiJ_G0021857Synj110082.077ENSDARG00000025011synj19670.430Danio_rerio
MGP_SPRETEiJ_G0021857Synj110089.235ENSDNOG00000010732SYNJ19983.763Dasypus_novemcinctus
MGP_SPRETEiJ_G0021857Synj110097.835ENSDORG00000014735-10097.835Dipodomys_ordii
MGP_SPRETEiJ_G0021857Synj18695.726ENSETEG00000018674SYNJ17895.726Echinops_telfairi
MGP_SPRETEiJ_G0021857Synj110097.980ENSEASG00005006287SYNJ19893.347Equus_asinus_asinus
MGP_SPRETEiJ_G0021857Synj110097.835ENSECAG00000004829SYNJ110088.441Equus_caballus
MGP_SPRETEiJ_G0021857Synj183100.000ENSEEUG00000005150SYNJ19387.805Erinaceus_europaeus
MGP_SPRETEiJ_G0021857Synj110081.727ENSELUG00000009731synj19563.135Esox_lucius
MGP_SPRETEiJ_G0021857Synj110097.547ENSFCAG00000012498SYNJ110091.096Felis_catus
MGP_SPRETEiJ_G0021857Synj17477.835ENSFALG00000004680SYNJ110069.753Ficedula_albicollis
MGP_SPRETEiJ_G0021857Synj110097.980ENSFDAG00000016818SYNJ110097.980Fukomys_damarensis
MGP_SPRETEiJ_G0021857Synj110081.223ENSFHEG00000017689synj19660.905Fundulus_heteroclitus
MGP_SPRETEiJ_G0021857Synj19379.421ENSGMOG00000014852synj17772.915Gadus_morhua
MGP_SPRETEiJ_G0021857Synj110092.929ENSGALG00000034317SYNJ110074.185Gallus_gallus
MGP_SPRETEiJ_G0021857Synj110082.446ENSGAFG00000019466synj18961.589Gambusia_affinis
MGP_SPRETEiJ_G0021857Synj19876.445ENSGACG00000020575synj19464.590Gasterosteus_aculeatus
MGP_SPRETEiJ_G0021857Synj110093.939ENSGAGG00000022523SYNJ110085.349Gopherus_agassizii
MGP_SPRETEiJ_G0021857Synj110097.691ENSGGOG00000015945SYNJ110092.683Gorilla_gorilla
MGP_SPRETEiJ_G0021857Synj110081.366ENSHBUG00000007774synj19669.954Haplochromis_burtoni
MGP_SPRETEiJ_G0021857Synj110097.980ENSHGLG00000006420SYNJ110097.980Heterocephalus_glaber_female
MGP_SPRETEiJ_G0021857Synj110097.980ENSHGLG00100012591SYNJ110097.980Heterocephalus_glaber_male
MGP_SPRETEiJ_G0021857Synj110077.122ENSHCOG00000012774synj18672.087Hippocampus_comes
MGP_SPRETEiJ_G0021857Synj110083.165ENSIPUG00000010691SYNJ19561.221Ictalurus_punctatus
MGP_SPRETEiJ_G0021857Synj110097.980ENSSTOG00000015806SYNJ110095.198Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0021857Synj19988.855ENSJJAG00000020168Synj110085.262Jaculus_jaculus
MGP_SPRETEiJ_G0021857Synj110082.446ENSKMAG00000004221synj19472.909Kryptolebias_marmoratus
MGP_SPRETEiJ_G0021857Synj110081.818ENSLBEG00000015081synj19766.219Labrus_bergylta
MGP_SPRETEiJ_G0021857Synj110086.827ENSLACG00000005928SYNJ19869.903Latimeria_chalumnae
MGP_SPRETEiJ_G0021857Synj110084.637ENSLOCG00000009230synj110070.724Lepisosteus_oculatus
MGP_SPRETEiJ_G0021857Synj110095.578ENSLAFG00000011806SYNJ19986.608Loxodonta_africana
MGP_SPRETEiJ_G0021857Synj19497.397ENSMFAG00000018883SYNJ19993.553Macaca_fascicularis
MGP_SPRETEiJ_G0021857Synj110096.576ENSMMUG00000004624SYNJ110093.612Macaca_mulatta
MGP_SPRETEiJ_G0021857Synj110097.835ENSMNEG00000040077SYNJ19593.845Macaca_nemestrina
MGP_SPRETEiJ_G0021857Synj110097.835ENSMLEG00000037029SYNJ110092.835Mandrillus_leucophaeus
MGP_SPRETEiJ_G0021857Synj110083.165ENSMAMG00000013404synj19658.993Mastacembelus_armatus
MGP_SPRETEiJ_G0021857Synj110082.734ENSMZEG00005024358synj19668.072Maylandia_zebra
MGP_SPRETEiJ_G0021857Synj110089.533ENSMGAG00000014522SYNJ110077.227Meleagris_gallopavo
MGP_SPRETEiJ_G0021857Synj110098.413ENSMAUG00000009743Synj110098.413Mesocricetus_auratus
MGP_SPRETEiJ_G0021857Synj110097.547ENSMICG00000034953SYNJ110092.607Microcebus_murinus
MGP_SPRETEiJ_G0021857Synj110081.418ENSMMOG00000010203synj19767.948Mola_mola
MGP_SPRETEiJ_G0021857Synj110086.163ENSMODG00000021073SYNJ110078.880Monodelphis_domestica
MGP_SPRETEiJ_G0021857Synj110082.878ENSMALG00000014015synj19660.671Monopterus_albus
MGP_SPRETEiJ_G0021857Synj110099.278MGP_CAROLIEiJ_G0020951Synj110099.278Mus_caroli
MGP_SPRETEiJ_G0021857Synj110099.711ENSMUSG00000022973Synj110099.711Mus_musculus
MGP_SPRETEiJ_G0021857Synj110099.711MGP_PahariEiJ_G0016656Synj110099.711Mus_pahari
MGP_SPRETEiJ_G0021857Synj110096.454ENSMPUG00000001153SYNJ110087.753Mustela_putorius_furo
MGP_SPRETEiJ_G0021857Synj16282.619ENSMLUG00000005764-10073.592Myotis_lucifugus
MGP_SPRETEiJ_G0021857Synj19494.793ENSMLUG00000026584-10094.667Myotis_lucifugus
MGP_SPRETEiJ_G0021857Synj110098.268ENSNGAG00000000453Synj110098.268Nannospalax_galili
MGP_SPRETEiJ_G0021857Synj110082.878ENSNBRG00000011936synj19764.753Neolamprologus_brichardi
MGP_SPRETEiJ_G0021857Synj18889.599ENSNLEG00000003734SYNJ110088.263Nomascus_leucogenys
MGP_SPRETEiJ_G0021857Synj18979.614ENSMEUG00000004158-7377.364Notamacropus_eugenii
MGP_SPRETEiJ_G0021857Synj110090.300ENSOPRG00000013602SYNJ19392.927Ochotona_princeps
MGP_SPRETEiJ_G0021857Synj110097.547ENSODEG00000002409-10097.547Octodon_degus
MGP_SPRETEiJ_G0021857Synj110081.792ENSONIG00000004667synj110067.944Oreochromis_niloticus
MGP_SPRETEiJ_G0021857Synj19491.815ENSOANG00000006929SYNJ19577.725Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0021857Synj110095.863ENSOCUG00000001420SYNJ110085.127Oryctolagus_cuniculus
MGP_SPRETEiJ_G0021857Synj110081.583ENSORLG00000004320synj19867.089Oryzias_latipes
MGP_SPRETEiJ_G0021857Synj110078.094ENSORLG00020011994synj19668.227Oryzias_latipes_hni
MGP_SPRETEiJ_G0021857Synj110081.727ENSORLG00015018077synj19559.050Oryzias_latipes_hsok
MGP_SPRETEiJ_G0021857Synj110082.302ENSOMEG00000014322synj19766.420Oryzias_melastigma
MGP_SPRETEiJ_G0021857Synj110089.158ENSOGAG00000006010SYNJ110085.178Otolemur_garnettii
MGP_SPRETEiJ_G0021857Synj110096.028ENSOARG00000013414SYNJ19885.723Ovis_aries
MGP_SPRETEiJ_G0021857Synj110097.691ENSPPAG00000026784SYNJ110092.835Pan_paniscus
MGP_SPRETEiJ_G0021857Synj110097.691ENSPPRG00000023469SYNJ110091.172Panthera_pardus
MGP_SPRETEiJ_G0021857Synj110097.547ENSPTIG00000007930SYNJ110091.096Panthera_tigris_altaica
MGP_SPRETEiJ_G0021857Synj110097.691ENSPTRG00000023787SYNJ110092.835Pan_troglodytes
MGP_SPRETEiJ_G0021857Synj110097.691ENSPTRG00000048135-10088.973Pan_troglodytes
MGP_SPRETEiJ_G0021857Synj110097.835ENSPANG00000022531SYNJ110093.902Papio_anubis
MGP_SPRETEiJ_G0021857Synj110084.029ENSPKIG00000022603synj19576.583Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0021857Synj110082.734ENSPMGG00000016831synj19167.318Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0021857Synj110098.846ENSPEMG00000018767Synj110098.846Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0021857Synj110064.266ENSPMAG00000002887synj19653.237Petromyzon_marinus
MGP_SPRETEiJ_G0021857Synj110092.496ENSPCIG00000016372SYNJ110085.747Phascolarctos_cinereus
MGP_SPRETEiJ_G0021857Synj110081.108ENSPFOG00000016886synj110065.947Poecilia_formosa
MGP_SPRETEiJ_G0021857Synj110082.014ENSPLAG00000017559synj19765.182Poecilia_latipinna
MGP_SPRETEiJ_G0021857Synj110081.871ENSPMEG00000007643synj18961.921Poecilia_mexicana
MGP_SPRETEiJ_G0021857Synj110082.302ENSPREG00000012412synj19867.680Poecilia_reticulata
MGP_SPRETEiJ_G0021857Synj110096.148ENSPPYG00000011365SYNJ19892.151Pongo_abelii
MGP_SPRETEiJ_G0021857Synj18492.857ENSPCAG00000009906SYNJ18492.857Procavia_capensis
MGP_SPRETEiJ_G0021857Synj18599.465ENSPCOG00000024841SYNJ19987.472Propithecus_coquereli
MGP_SPRETEiJ_G0021857Synj110095.720ENSPVAG00000000892SYNJ110084.030Pteropus_vampyrus
MGP_SPRETEiJ_G0021857Synj110082.734ENSPNYG00000022989synj19766.766Pundamilia_nyererei
MGP_SPRETEiJ_G0021857Synj110083.022ENSPNAG00000021119synj19177.425Pygocentrus_nattereri
MGP_SPRETEiJ_G0021857Synj110098.573ENSRNOG00000002051Synj110097.713Rattus_norvegicus
MGP_SPRETEiJ_G0021857Synj110097.691ENSRBIG00000034477SYNJ110092.988Rhinopithecus_bieti
MGP_SPRETEiJ_G0021857Synj110096.291ENSRROG00000039256SYNJ110092.988Rhinopithecus_roxellana
MGP_SPRETEiJ_G0021857Synj110097.835ENSSBOG00000021001SYNJ110092.612Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0021857Synj110092.063ENSSHAG00000008538SYNJ19777.102Sarcophilus_harrisii
MGP_SPRETEiJ_G0021857Synj110083.309ENSSFOG00015006095synj19562.310Scleropages_formosus
MGP_SPRETEiJ_G0021857Synj110082.158ENSSMAG00000018066synj19566.890Scophthalmus_maximus
MGP_SPRETEiJ_G0021857Synj110082.878ENSSDUG00000013058synj19659.756Seriola_dumerili
MGP_SPRETEiJ_G0021857Synj110082.446ENSSLDG00000021406synj19668.934Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0021857Synj17693.832ENSSARG00000009490SYNJ17395.677Sorex_araneus
MGP_SPRETEiJ_G0021857Synj110093.651ENSSPUG00000012552SYNJ110074.293Sphenodon_punctatus
MGP_SPRETEiJ_G0021857Synj18983.280ENSSPAG00000006812SYNJ19658.396Stegastes_partitus
MGP_SPRETEiJ_G0021857Synj110083.309ENSSPAG00000017029synj19767.430Stegastes_partitus
MGP_SPRETEiJ_G0021857Synj110097.835ENSSSCG00000012035SYNJ110092.576Sus_scrofa
MGP_SPRETEiJ_G0021857Synj110091.218ENSTGUG00000013445SYNJ110076.397Taeniopygia_guttata
MGP_SPRETEiJ_G0021857Synj110081.871ENSTRUG00000006907synj19363.136Takifugu_rubripes
MGP_SPRETEiJ_G0021857Synj110077.139ENSTNIG00000009940synj110066.278Tetraodon_nigroviridis
MGP_SPRETEiJ_G0021857Synj19299.465ENSTBEG00000016298SYNJ19286.858Tupaia_belangeri
MGP_SPRETEiJ_G0021857Synj110090.157ENSTTRG00000002222SYNJ110078.192Tursiops_truncatus
MGP_SPRETEiJ_G0021857Synj110097.691ENSUAMG00000018606SYNJ19995.322Ursus_americanus
MGP_SPRETEiJ_G0021857Synj110097.691ENSUMAG00000018419SYNJ19995.322Ursus_maritimus
MGP_SPRETEiJ_G0021857Synj18798.571ENSVPAG00000001241SYNJ18798.571Vicugna_pacos
MGP_SPRETEiJ_G0021857Synj110097.835ENSVVUG00000023125SYNJ110093.516Vulpes_vulpes
MGP_SPRETEiJ_G0021857Synj110085.269ENSXETG00000009899synj110068.904Xenopus_tropicalis
MGP_SPRETEiJ_G0021857Synj110081.223ENSXCOG00000011896synj19769.225Xiphophorus_couchianus
MGP_SPRETEiJ_G0021857Synj110080.939ENSXMAG00000017524synj19768.223Xiphophorus_maculatus

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