EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0021931 (Gene tree)
Gene ID: -
Gene Symbol: Synj2
Alias: SJ2
Full Name: synaptojanin 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 109705 bases
Position: chr17:3063640-3173344
Accession: 1201671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0044483	Exo_endo_phos	PF03372.23	5.5e-14	1	1
MGP_SPRETEiJ_P0044493	Exo_endo_phos	PF03372.23	6.2e-14	1	1
MGP_SPRETEiJ_P0044490	Exo_endo_phos	PF03372.23	8.8e-14	1	1
MGP_SPRETEiJ_P0044487	Exo_endo_phos	PF03372.23	1.3e-13	1	1
MGP_SPRETEiJ_P0044491	Exo_endo_phos	PF03372.23	1.5e-13	1	1
MGP_SPRETEiJ_P0044480	Exo_endo_phos	PF03372.23	1.6e-13	1	1
MGP_SPRETEiJ_P0044488	Exo_endo_phos	PF03372.23	1.7e-13	1	1
MGP_SPRETEiJ_P0044484	Exo_endo_phos	PF03372.23	1.7e-13	1	1
MGP_SPRETEiJ_P0044486	Exo_endo_phos	PF03372.23	1.9e-13	1	1
MGP_SPRETEiJ_P0044485	Exo_endo_phos	PF03372.23	2.1e-13	1	1
MGP_SPRETEiJ_P0044479	Exo_endo_phos	PF03372.23	2.4e-13	1	1
MGP_SPRETEiJ_P0044482	Exo_endo_phos	PF03372.23	2.4e-13	1	1
MGP_SPRETEiJ_P0044489	Exo_endo_phos	PF03372.23	1.1e-08	1	1
MGP_SPRETEiJ_P0044494	DUF1866	PF08952.11	9.2e-60	1	1
MGP_SPRETEiJ_P0044493	DUF1866	PF08952.11	2.5e-59	1	1
MGP_SPRETEiJ_P0044490	DUF1866	PF08952.11	2.9e-59	1	1
MGP_SPRETEiJ_P0044487	DUF1866	PF08952.11	4.1e-59	1	1
MGP_SPRETEiJ_P0044480	DUF1866	PF08952.11	4.8e-59	1	1
MGP_SPRETEiJ_P0044491	DUF1866	PF08952.11	5e-59	1	1
MGP_SPRETEiJ_P0044484	DUF1866	PF08952.11	5.3e-59	1	1
MGP_SPRETEiJ_P0044488	DUF1866	PF08952.11	5.4e-59	1	1
MGP_SPRETEiJ_P0044486	DUF1866	PF08952.11	5.8e-59	1	1
MGP_SPRETEiJ_P0044485	DUF1866	PF08952.11	6.6e-59	1	1
MGP_SPRETEiJ_P0044482	DUF1866	PF08952.11	6.9e-59	1	1
MGP_SPRETEiJ_P0044479	DUF1866	PF08952.11	7.1e-59	1	1
MGP_SPRETEiJ_P0044483	DUF1866	PF08952.11	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0044481	-	5531	-	MGP_SPRETEiJ_P0044481	84 (aa)	-	UPI00033352A7
MGP_SPRETEiJ_T0044480	-	3565	-	MGP_SPRETEiJ_P0044480	1144 (aa)	-	-
MGP_SPRETEiJ_T0044483	-	2513	-	MGP_SPRETEiJ_P0044483	660 (aa)	-	-
MGP_SPRETEiJ_T0044482	-	4791	-	MGP_SPRETEiJ_P0044482	1434 (aa)	-	-
MGP_SPRETEiJ_T0044485	-	4806	-	MGP_SPRETEiJ_P0044485	1394 (aa)	-	-
MGP_SPRETEiJ_T0044479	-	5009	-	MGP_SPRETEiJ_P0044479	1479 (aa)	-	-
MGP_SPRETEiJ_T0044487	-	3498	-	MGP_SPRETEiJ_P0044487	1016 (aa)	-	-
MGP_SPRETEiJ_T0044486	-	5128	-	MGP_SPRETEiJ_P0044486	1273 (aa)	-	-
MGP_SPRETEiJ_T0044489	-	2535	-	MGP_SPRETEiJ_P0044489	535 (aa)	-	-
MGP_SPRETEiJ_T0044488	-	4010	-	MGP_SPRETEiJ_P0044488	1194 (aa)	-	-
MGP_SPRETEiJ_T0044490	-	2634	-	MGP_SPRETEiJ_P0044490	824 (aa)	-	-
MGP_SPRETEiJ_T0044494	-	1260	-	MGP_SPRETEiJ_P0044494	384 (aa)	-	-
MGP_SPRETEiJ_T0044491	-	3776	-	MGP_SPRETEiJ_P0044491	1118 (aa)	-	-
MGP_SPRETEiJ_T0044493	-	2789	-	MGP_SPRETEiJ_P0044493	725 (aa)	-	-
MGP_SPRETEiJ_T0044492	-	460	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0044484	-	4072	-	MGP_SPRETEiJ_P0044484	1216 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0021931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0021931's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0021931	Synj2	99	59.581	MGP_SPRETEiJ_G0021857	Synj1	100	60.057
MGP_SPRETEiJ_G0021931	Synj2	58	32.908	MGP_SPRETEiJ_G0034193	Ocrl	50	32.282
MGP_SPRETEiJ_G0021931	Synj2	50	34.125	MGP_SPRETEiJ_G0016851	-	56	34.125

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0021931	Synj2	100	92.576	ENSG00000078269	SYNJ2	98	87.302	Homo_sapiens
MGP_SPRETEiJ_G0021931	Synj2	100	91.061	ENSAMEG00000009581	SYNJ2	99	79.363	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0021931	Synj2	100	84.720	ENSAPLG00000002563	SYNJ2	99	69.139	Anas_platyrhynchos
MGP_SPRETEiJ_G0021931	Synj2	100	81.818	ENSACAG00000004945	SYNJ2	90	70.537	Anolis_carolinensis
MGP_SPRETEiJ_G0021931	Synj2	100	92.738	ENSANAG00000026575	SYNJ2	98	87.292	Aotus_nancymaae
MGP_SPRETEiJ_G0021931	Synj2	100	89.713	ENSBTAG00000000817	SYNJ2	99	80.645	Bos_taurus
MGP_SPRETEiJ_G0021931	Synj2	100	92.436	ENSCJAG00000003570	SYNJ2	98	87.450	Callithrix_jacchus
MGP_SPRETEiJ_G0021931	Synj2	100	91.818	ENSCAFG00000000644	SYNJ2	99	82.414	Canis_familiaris
MGP_SPRETEiJ_G0021931	Synj2	100	91.818	ENSCAFG00020015809	SYNJ2	99	85.244	Canis_lupus_dingo
MGP_SPRETEiJ_G0021931	Synj2	100	89.242	ENSCHIG00000011077	SYNJ2	99	80.596	Capra_hircus
MGP_SPRETEiJ_G0021931	Synj2	100	92.424	ENSTSYG00000014342	SYNJ2	94	88.076	Carlito_syrichta
MGP_SPRETEiJ_G0021931	Synj2	100	87.824	ENSCAPG00000000287	SYNJ2	100	87.824	Cavia_aperea
MGP_SPRETEiJ_G0021931	Synj2	100	92.879	ENSCPOG00000009144	SYNJ2	100	90.081	Cavia_porcellus
MGP_SPRETEiJ_G0021931	Synj2	100	92.436	ENSCCAG00000025484	SYNJ2	98	87.212	Cebus_capucinus
MGP_SPRETEiJ_G0021931	Synj2	100	92.879	ENSCATG00000042943	SYNJ2	98	87.619	Cercocebus_atys
MGP_SPRETEiJ_G0021931	Synj2	100	93.182	ENSCLAG00000004730	SYNJ2	99	85.330	Chinchilla_lanigera
MGP_SPRETEiJ_G0021931	Synj2	100	92.727	ENSCSAG00000013130	SYNJ2	99	83.434	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0021931	Synj2	56	93.694	ENSCHOG00000000343	-	52	93.750	Choloepus_hoffmanni
MGP_SPRETEiJ_G0021931	Synj2	100	84.871	ENSCPBG00000016273	SYNJ2	98	70.530	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0021931	Synj2	100	92.727	ENSCANG00000040349	SYNJ2	98	87.807	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0021931	Synj2	100	96.364	ENSCGRG00001004257	Synj2	99	93.750	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0021931	Synj2	100	96.364	ENSCGRG00000001656	Synj2	99	93.750	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0021931	Synj2	99	84.977	ENSDNOG00000015900	SYNJ2	97	80.330	Dasypus_novemcinctus
MGP_SPRETEiJ_G0021931	Synj2	100	92.727	ENSDORG00000014128	Synj2	98	81.697	Dipodomys_ordii
MGP_SPRETEiJ_G0021931	Synj2	87	89.738	ENSETEG00000017418	SYNJ2	81	90.036	Echinops_telfairi
MGP_SPRETEiJ_G0021931	Synj2	100	92.576	ENSEASG00005018902	SYNJ2	99	83.287	Equus_asinus_asinus
MGP_SPRETEiJ_G0021931	Synj2	100	92.424	ENSECAG00000012646	SYNJ2	93	83.188	Equus_caballus
MGP_SPRETEiJ_G0021931	Synj2	63	78.571	ENSEEUG00000015796	-	57	78.571	Erinaceus_europaeus
MGP_SPRETEiJ_G0021931	Synj2	100	91.212	ENSFCAG00000010854	SYNJ2	98	86.491	Felis_catus
MGP_SPRETEiJ_G0021931	Synj2	100	81.997	ENSFALG00000012593	SYNJ2	98	68.097	Ficedula_albicollis
MGP_SPRETEiJ_G0021931	Synj2	100	91.818	ENSFDAG00000016352	SYNJ2	97	90.446	Fukomys_damarensis
MGP_SPRETEiJ_G0021931	Synj2	99	84.394	ENSGALG00000013727	SYNJ2	90	73.948	Gallus_gallus
MGP_SPRETEiJ_G0021931	Synj2	100	84.418	ENSGAGG00000009857	SYNJ2	98	70.020	Gopherus_agassizii
MGP_SPRETEiJ_G0021931	Synj2	100	92.576	ENSGGOG00000012210	SYNJ2	98	87.540	Gorilla_gorilla
MGP_SPRETEiJ_G0021931	Synj2	100	93.182	ENSHGLG00000007534	SYNJ2	95	91.530	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0021931	Synj2	100	93.182	ENSHGLG00100009973	SYNJ2	100	87.565	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0021931	Synj2	100	94.242	ENSSTOG00000016474	SYNJ2	99	84.647	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0021931	Synj2	100	94.697	ENSJJAG00000014436	Synj2	96	87.511	Jaculus_jaculus
MGP_SPRETEiJ_G0021931	Synj2	100	74.398	ENSLACG00000007316	SYNJ2	99	68.233	Latimeria_chalumnae
MGP_SPRETEiJ_G0021931	Synj2	100	88.956	ENSLAFG00000011979	SYNJ2	99	80.029	Loxodonta_africana
MGP_SPRETEiJ_G0021931	Synj2	93	90.852	ENSMFAG00000040552	SYNJ2	99	90.139	Macaca_fascicularis
MGP_SPRETEiJ_G0021931	Synj2	100	93.030	ENSMMUG00000007153	SYNJ2	97	87.745	Macaca_mulatta
MGP_SPRETEiJ_G0021931	Synj2	100	93.182	ENSMNEG00000017211	SYNJ2	98	87.698	Macaca_nemestrina
MGP_SPRETEiJ_G0021931	Synj2	100	86.475	ENSMLEG00000024911	SYNJ2	99	80.227	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0021931	Synj2	99	82.153	ENSMGAG00000012839	SYNJ2	98	73.134	Meleagris_gallopavo
MGP_SPRETEiJ_G0021931	Synj2	100	96.364	ENSMAUG00000022212	Synj2	99	93.015	Mesocricetus_auratus
MGP_SPRETEiJ_G0021931	Synj2	100	90.758	ENSMICG00000015804	SYNJ2	97	86.447	Microcebus_murinus
MGP_SPRETEiJ_G0021931	Synj2	100	96.212	ENSMOCG00000020054	Synj2	99	93.742	Microtus_ochrogaster
MGP_SPRETEiJ_G0021931	Synj2	100	90.455	ENSMODG00000007783	SYNJ2	99	77.919	Monodelphis_domestica
MGP_SPRETEiJ_G0021931	Synj2	100	98.788	MGP_CAROLIEiJ_G0021026	Synj2	100	98.788	Mus_caroli
MGP_SPRETEiJ_G0021931	Synj2	100	99.394	ENSMUSG00000023805	Synj2	100	99.394	Mus_musculus
MGP_SPRETEiJ_G0021931	Synj2	100	98.485	MGP_PahariEiJ_G0023344	Synj2	100	98.485	Mus_pahari
MGP_SPRETEiJ_G0021931	Synj2	100	87.576	ENSMPUG00000005323	SYNJ2	98	83.448	Mustela_putorius_furo
MGP_SPRETEiJ_G0021931	Synj2	100	91.364	ENSMLUG00000000324	SYNJ2	99	80.410	Myotis_lucifugus
MGP_SPRETEiJ_G0021931	Synj2	100	95.000	ENSNGAG00000014859	Synj2	98	92.759	Nannospalax_galili
MGP_SPRETEiJ_G0021931	Synj2	100	90.211	ENSNLEG00000010750	SYNJ2	97	84.609	Nomascus_leucogenys
MGP_SPRETEiJ_G0021931	Synj2	93	86.034	ENSMEUG00000003493	SYNJ2	94	82.020	Notamacropus_eugenii
MGP_SPRETEiJ_G0021931	Synj2	93	87.154	ENSOPRG00000009648	SYNJ2	93	79.064	Ochotona_princeps
MGP_SPRETEiJ_G0021931	Synj2	100	93.030	ENSODEG00000007709	SYNJ2	100	87.824	Octodon_degus
MGP_SPRETEiJ_G0021931	Synj2	90	64.250	ENSOANG00000029828	-	99	59.098	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0021931	Synj2	100	90.152	ENSOCUG00000004762	SYNJ2	99	80.206	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0021931	Synj2	100	91.843	ENSOGAG00000000488	SYNJ2	100	86.776	Otolemur_garnettii
MGP_SPRETEiJ_G0021931	Synj2	100	89.259	ENSOARG00000004304	SYNJ2	99	79.654	Ovis_aries
MGP_SPRETEiJ_G0021931	Synj2	100	92.727	ENSPPAG00000028831	SYNJ2	99	82.553	Pan_paniscus
MGP_SPRETEiJ_G0021931	Synj2	100	91.364	ENSPPRG00000009068	SYNJ2	98	86.571	Panthera_pardus
MGP_SPRETEiJ_G0021931	Synj2	100	90.909	ENSPTIG00000018780	SYNJ2	94	86.175	Panthera_tigris_altaica
MGP_SPRETEiJ_G0021931	Synj2	100	92.727	ENSPTRG00000018739	SYNJ2	99	88.301	Pan_troglodytes
MGP_SPRETEiJ_G0021931	Synj2	100	93.030	ENSPANG00000010755	SYNJ2	98	87.698	Papio_anubis
MGP_SPRETEiJ_G0021931	Synj2	100	84.418	ENSPSIG00000014659	SYNJ2	98	69.945	Pelodiscus_sinensis
MGP_SPRETEiJ_G0021931	Synj2	100	96.061	ENSPEMG00000006247	Synj2	100	91.948	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0021931	Synj2	100	89.545	ENSPCIG00000010179	SYNJ2	99	77.919	Phascolarctos_cinereus
MGP_SPRETEiJ_G0021931	Synj2	100	92.879	ENSPPYG00000017130	SYNJ2	99	83.780	Pongo_abelii
MGP_SPRETEiJ_G0021931	Synj2	94	93.548	ENSPCAG00000009217	SYNJ2	90	93.548	Procavia_capensis
MGP_SPRETEiJ_G0021931	Synj2	100	91.970	ENSPCOG00000026910	SYNJ2	97	87.650	Propithecus_coquereli
MGP_SPRETEiJ_G0021931	Synj2	96	89.606	ENSPVAG00000006131	SYNJ2	99	77.860	Pteropus_vampyrus
MGP_SPRETEiJ_G0021931	Synj2	100	94.535	ENSRNOG00000017114	Synj2	100	92.572	Rattus_norvegicus
MGP_SPRETEiJ_G0021931	Synj2	100	92.284	ENSRBIG00000044126	SYNJ2	99	82.512	Rhinopithecus_bieti
MGP_SPRETEiJ_G0021931	Synj2	100	92.727	ENSRROG00000027755	SYNJ2	98	87.540	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0021931	Synj2	100	92.436	ENSSBOG00000034876	SYNJ2	98	87.371	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0021931	Synj2	100	90.152	ENSSHAG00000018881	SYNJ2	99	77.285	Sarcophilus_harrisii
MGP_SPRETEiJ_G0021931	Synj2	100	83.636	ENSSPUG00000000491	SYNJ2	95	76.594	Sphenodon_punctatus
MGP_SPRETEiJ_G0021931	Synj2	100	90.758	ENSSSCG00000012315	SYNJ2	98	86.811	Sus_scrofa
MGP_SPRETEiJ_G0021931	Synj2	100	80.945	ENSTGUG00000011082	SYNJ2	100	72.342	Taeniopygia_guttata
MGP_SPRETEiJ_G0021931	Synj2	80	84.483	ENSTBEG00000015827	SYNJ2	84	76.877	Tupaia_belangeri
MGP_SPRETEiJ_G0021931	Synj2	100	82.024	ENSTTRG00000009677	SYNJ2	99	77.254	Tursiops_truncatus
MGP_SPRETEiJ_G0021931	Synj2	90	73.980	ENSUAMG00000021958	-	97	73.907	Ursus_americanus
MGP_SPRETEiJ_G0021931	Synj2	88	85.805	ENSUAMG00000026577	-	88	85.805	Ursus_americanus
MGP_SPRETEiJ_G0021931	Synj2	100	86.818	ENSUMAG00000012826	SYNJ2	97	85.162	Ursus_maritimus
MGP_SPRETEiJ_G0021931	Synj2	100	88.321	ENSVVUG00000007407	SYNJ2	99	88.125	Vulpes_vulpes
MGP_SPRETEiJ_G0021931	Synj2	100	74.924	ENSXETG00000034066	synj2	84	65.794	Xenopus_tropicalis