EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0022057 (Gene tree)
Gene ID: -
Gene Symbol: Zscan10
Alias: Zfp206|Zscan10
Full Name: zinc finger and SCAN domain containing 10
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 11536 bases
Position: chr17:20250564-20262099
Accession: 3040700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0044827	zf-C2H2	PF00096.26	4.5e-68	1	12
MGP_SPRETEiJ_P0044827	zf-C2H2	PF00096.26	4.5e-68	2	12
MGP_SPRETEiJ_P0044827	zf-C2H2	PF00096.26	4.5e-68	3	12
MGP_SPRETEiJ_P0044827	zf-C2H2	PF00096.26	4.5e-68	4	12
MGP_SPRETEiJ_P0044827	zf-C2H2	PF00096.26	4.5e-68	5	12
MGP_SPRETEiJ_P0044827	zf-C2H2	PF00096.26	4.5e-68	6	12
MGP_SPRETEiJ_P0044827	zf-C2H2	PF00096.26	4.5e-68	7	12
MGP_SPRETEiJ_P0044827	zf-C2H2	PF00096.26	4.5e-68	8	12
MGP_SPRETEiJ_P0044827	zf-C2H2	PF00096.26	4.5e-68	9	12
MGP_SPRETEiJ_P0044827	zf-C2H2	PF00096.26	4.5e-68	10	12
MGP_SPRETEiJ_P0044827	zf-C2H2	PF00096.26	4.5e-68	11	12
MGP_SPRETEiJ_P0044827	zf-C2H2	PF00096.26	4.5e-68	12	12
MGP_SPRETEiJ_P0044825	zf-C2H2	PF00096.26	5.2e-67	1	12
MGP_SPRETEiJ_P0044825	zf-C2H2	PF00096.26	5.2e-67	2	12
MGP_SPRETEiJ_P0044825	zf-C2H2	PF00096.26	5.2e-67	3	12
MGP_SPRETEiJ_P0044825	zf-C2H2	PF00096.26	5.2e-67	4	12
MGP_SPRETEiJ_P0044825	zf-C2H2	PF00096.26	5.2e-67	5	12
MGP_SPRETEiJ_P0044825	zf-C2H2	PF00096.26	5.2e-67	6	12
MGP_SPRETEiJ_P0044825	zf-C2H2	PF00096.26	5.2e-67	7	12
MGP_SPRETEiJ_P0044825	zf-C2H2	PF00096.26	5.2e-67	8	12
MGP_SPRETEiJ_P0044825	zf-C2H2	PF00096.26	5.2e-67	9	12
MGP_SPRETEiJ_P0044825	zf-C2H2	PF00096.26	5.2e-67	10	12
MGP_SPRETEiJ_P0044825	zf-C2H2	PF00096.26	5.2e-67	11	12
MGP_SPRETEiJ_P0044825	zf-C2H2	PF00096.26	5.2e-67	12	12
MGP_SPRETEiJ_P0044829	zf-C2H2	PF00096.26	4.9e-66	1	12
MGP_SPRETEiJ_P0044829	zf-C2H2	PF00096.26	4.9e-66	2	12
MGP_SPRETEiJ_P0044829	zf-C2H2	PF00096.26	4.9e-66	3	12
MGP_SPRETEiJ_P0044829	zf-C2H2	PF00096.26	4.9e-66	4	12
MGP_SPRETEiJ_P0044829	zf-C2H2	PF00096.26	4.9e-66	5	12
MGP_SPRETEiJ_P0044829	zf-C2H2	PF00096.26	4.9e-66	6	12
MGP_SPRETEiJ_P0044829	zf-C2H2	PF00096.26	4.9e-66	7	12
MGP_SPRETEiJ_P0044829	zf-C2H2	PF00096.26	4.9e-66	8	12
MGP_SPRETEiJ_P0044829	zf-C2H2	PF00096.26	4.9e-66	9	12
MGP_SPRETEiJ_P0044829	zf-C2H2	PF00096.26	4.9e-66	10	12
MGP_SPRETEiJ_P0044829	zf-C2H2	PF00096.26	4.9e-66	11	12
MGP_SPRETEiJ_P0044829	zf-C2H2	PF00096.26	4.9e-66	12	12
MGP_SPRETEiJ_P0044828	zf-C2H2	PF00096.26	2e-64	1	12
MGP_SPRETEiJ_P0044828	zf-C2H2	PF00096.26	2e-64	2	12
MGP_SPRETEiJ_P0044828	zf-C2H2	PF00096.26	2e-64	3	12
MGP_SPRETEiJ_P0044828	zf-C2H2	PF00096.26	2e-64	4	12
MGP_SPRETEiJ_P0044828	zf-C2H2	PF00096.26	2e-64	5	12
MGP_SPRETEiJ_P0044828	zf-C2H2	PF00096.26	2e-64	6	12
MGP_SPRETEiJ_P0044828	zf-C2H2	PF00096.26	2e-64	7	12
MGP_SPRETEiJ_P0044828	zf-C2H2	PF00096.26	2e-64	8	12
MGP_SPRETEiJ_P0044828	zf-C2H2	PF00096.26	2e-64	9	12
MGP_SPRETEiJ_P0044828	zf-C2H2	PF00096.26	2e-64	10	12
MGP_SPRETEiJ_P0044828	zf-C2H2	PF00096.26	2e-64	11	12
MGP_SPRETEiJ_P0044828	zf-C2H2	PF00096.26	2e-64	12	12
MGP_SPRETEiJ_P0044826	zf-C2H2	PF00096.26	5.4e-64	1	12
MGP_SPRETEiJ_P0044826	zf-C2H2	PF00096.26	5.4e-64	2	12
MGP_SPRETEiJ_P0044826	zf-C2H2	PF00096.26	5.4e-64	3	12
MGP_SPRETEiJ_P0044826	zf-C2H2	PF00096.26	5.4e-64	4	12
MGP_SPRETEiJ_P0044826	zf-C2H2	PF00096.26	5.4e-64	5	12
MGP_SPRETEiJ_P0044826	zf-C2H2	PF00096.26	5.4e-64	6	12
MGP_SPRETEiJ_P0044826	zf-C2H2	PF00096.26	5.4e-64	7	12
MGP_SPRETEiJ_P0044826	zf-C2H2	PF00096.26	5.4e-64	8	12
MGP_SPRETEiJ_P0044826	zf-C2H2	PF00096.26	5.4e-64	9	12
MGP_SPRETEiJ_P0044826	zf-C2H2	PF00096.26	5.4e-64	10	12
MGP_SPRETEiJ_P0044826	zf-C2H2	PF00096.26	5.4e-64	11	12
MGP_SPRETEiJ_P0044826	zf-C2H2	PF00096.26	5.4e-64	12	12
MGP_SPRETEiJ_P0044830	zf-C2H2	PF00096.26	1.6e-08	1	2
MGP_SPRETEiJ_P0044830	zf-C2H2	PF00096.26	1.6e-08	2	2
MGP_SPRETEiJ_P0044829	zf-met	PF12874.7	3.8e-07	1	1
MGP_SPRETEiJ_P0044828	zf-met	PF12874.7	1.1e-05	1	1
MGP_SPRETEiJ_P0044826	zf-met	PF12874.7	2.2e-05	1	1
MGP_SPRETEiJ_P0044827	zf-met	PF12874.7	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0044827	-	2368	-	MGP_SPRETEiJ_P0044827	672 (aa)	-	-
MGP_SPRETEiJ_T0044826	-	2609	-	MGP_SPRETEiJ_P0044826	750 (aa)	-	-
MGP_SPRETEiJ_T0044825	-	2698	-	MGP_SPRETEiJ_P0044825	782 (aa)	-	-
MGP_SPRETEiJ_T0044834	-	1006	-	MGP_SPRETEiJ_P0044834	190 (aa)	-	-
MGP_SPRETEiJ_T0044835	-	844	-	MGP_SPRETEiJ_P0044835	262 (aa)	-	-
MGP_SPRETEiJ_T0044829	-	1902	-	MGP_SPRETEiJ_P0044829	543 (aa)	-	-
MGP_SPRETEiJ_T0044828	-	2271	-	MGP_SPRETEiJ_P0044828	702 (aa)	-	-
MGP_SPRETEiJ_T0044830	-	1074	-	MGP_SPRETEiJ_P0044830	329 (aa)	-	-
MGP_SPRETEiJ_T0044831	-	531	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0044832	-	891	-	MGP_SPRETEiJ_P0044832	149 (aa)	-	-
MGP_SPRETEiJ_T0044833	-	909	-	MGP_SPRETEiJ_P0044833	190 (aa)	-	-
MGP_SPRETEiJ_T0044836	-	548	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0022057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0022057's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0022057	Zscan10	82	37.282	MGP_SPRETEiJ_G0017233	Zfp672	100	42.857
MGP_SPRETEiJ_G0022057	Zscan10	86	32.952	MGP_SPRETEiJ_G0030453	Zfp574	93	33.902
MGP_SPRETEiJ_G0022057	Zscan10	75	43.165	MGP_SPRETEiJ_G0027723	Zbtb17	74	34.627
MGP_SPRETEiJ_G0022057	Zscan10	80	37.010	MGP_SPRETEiJ_G0019560	Zfp748	92	37.010
MGP_SPRETEiJ_G0022057	Zscan10	75	35.638	MGP_SPRETEiJ_G0032539	Zfp319	92	34.157
MGP_SPRETEiJ_G0022057	Zscan10	83	46.053	MGP_SPRETEiJ_G0032697	Zfp1	79	46.460
MGP_SPRETEiJ_G0022057	Zscan10	76	44.915	MGP_SPRETEiJ_G0029467	Prdm5	89	35.235
MGP_SPRETEiJ_G0022057	Zscan10	77	47.436	MGP_SPRETEiJ_G0030416	Zfp235	70	39.636
MGP_SPRETEiJ_G0022057	Zscan10	76	46.199	MGP_SPRETEiJ_G0030188	Zfp628	62	46.199
MGP_SPRETEiJ_G0022057	Zscan10	77	37.696	MGP_SPRETEiJ_G0017856	Zfp652	59	37.696
MGP_SPRETEiJ_G0022057	Zscan10	78	43.805	MGP_SPRETEiJ_G0031614	-	89	43.805
MGP_SPRETEiJ_G0022057	Zscan10	78	43.805	MGP_SPRETEiJ_G0031613	-	89	43.805
MGP_SPRETEiJ_G0022057	Zscan10	76	45.594	MGP_SPRETEiJ_G0031612	Zfp768	52	44.944
MGP_SPRETEiJ_G0022057	Zscan10	76	37.107	MGP_SPRETEiJ_G0025644	Zfp64	79	43.750
MGP_SPRETEiJ_G0022057	Zscan10	75	47.667	MGP_SPRETEiJ_G0020852	Zfp251	70	47.525
MGP_SPRETEiJ_G0022057	Zscan10	78	37.562	MGP_SPRETEiJ_G0022052	Zfp945	84	37.562
MGP_SPRETEiJ_G0022057	Zscan10	80	40.511	MGP_SPRETEiJ_G0030415	Zfp112	59	40.511
MGP_SPRETEiJ_G0022057	Zscan10	78	45.066	MGP_SPRETEiJ_G0030417	Zfp114	66	45.066
MGP_SPRETEiJ_G0022057	Zscan10	99	37.143	MGP_SPRETEiJ_G0023360	Zfp236	97	39.344
MGP_SPRETEiJ_G0022057	Zscan10	74	41.818	MGP_SPRETEiJ_G0030197	-	73	30.796
MGP_SPRETEiJ_G0022057	Zscan10	86	31.579	MGP_SPRETEiJ_G0030196	-	82	31.579
MGP_SPRETEiJ_G0022057	Zscan10	79	44.853	MGP_SPRETEiJ_G0030709	-	82	44.853
MGP_SPRETEiJ_G0022057	Zscan10	98	44.105	MGP_SPRETEiJ_G0019543	-	83	41.872
MGP_SPRETEiJ_G0022057	Zscan10	87	34.184	MGP_SPRETEiJ_G0019544	Zfp759	99	33.846
MGP_SPRETEiJ_G0022057	Zscan10	78	35.570	MGP_SPRETEiJ_G0030524	Zfp59	80	43.333
MGP_SPRETEiJ_G0022057	Zscan10	80	36.655	MGP_SPRETEiJ_G0030525	-	86	38.281
MGP_SPRETEiJ_G0022057	Zscan10	79	44.375	MGP_SPRETEiJ_G0030526	-	89	44.375
MGP_SPRETEiJ_G0022057	Zscan10	75	36.705	MGP_SPRETEiJ_G0029346	Repin1	92	36.705
MGP_SPRETEiJ_G0022057	Zscan10	83	50.862	MGP_SPRETEiJ_G0029809	Zfp637	82	50.442
MGP_SPRETEiJ_G0022057	Zscan10	76	32.797	MGP_SPRETEiJ_G0015474	Zbtb41	53	32.797
MGP_SPRETEiJ_G0022057	Zscan10	77	42.671	MGP_SPRETEiJ_G0030421	-	99	42.671
MGP_SPRETEiJ_G0022057	Zscan10	78	38.983	MGP_SPRETEiJ_G0030420	Zfp108	68	38.983
MGP_SPRETEiJ_G0022057	Zscan10	76	40.456	MGP_SPRETEiJ_G0030423	Zfp94	69	44.015
MGP_SPRETEiJ_G0022057	Zscan10	78	47.867	MGP_SPRETEiJ_G0030422	Zfp61	54	47.867
MGP_SPRETEiJ_G0022057	Zscan10	90	36.180	MGP_SPRETEiJ_G0030713	Zfp715	68	36.765
MGP_SPRETEiJ_G0022057	Zscan10	80	39.808	MGP_SPRETEiJ_G0030586	Zfp420	97	40.991
MGP_SPRETEiJ_G0022057	Zscan10	98	43.269	MGP_SPRETEiJ_G0019129	Zkscan4	95	40.667
MGP_SPRETEiJ_G0022057	Zscan10	99	37.160	MGP_SPRETEiJ_G0017272	Zfp867	97	37.160
MGP_SPRETEiJ_G0022057	Zscan10	81	41.509	MGP_SPRETEiJ_G0025181	Zfp661	85	50.820
MGP_SPRETEiJ_G0022057	Zscan10	95	47.953	MGP_SPRETEiJ_G0028173	Zbtb49	81	50.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0022057	Zscan10	100	99.554	ENSMUSG00000023902	Zscan10	100	99.554	Mus_musculus