EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0022071 (Gene tree)
Gene ID: -
Gene Symbol: Srrm2
Alias: 5033413A03Rik|SRm300
Full Name: serine/arginine repetitive matrix 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 32868 bases
Position: chr17:20450542-20483409
Accession: 1923206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0044868	cwf21	PF08312.12	3.7e-11	1	1
MGP_SPRETEiJ_P0044869	cwf21	PF08312.12	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0044870	-	8555	-	MGP_SPRETEiJ_P0044870	2607 (aa)	-	-
MGP_SPRETEiJ_T0044871	-	459	-	MGP_SPRETEiJ_P0044871	88 (aa)	-	UPI0004620EC3
MGP_SPRETEiJ_T0044872	-	433	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0044873	-	494	-	MGP_SPRETEiJ_P0044873	33 (aa)	-	-
MGP_SPRETEiJ_T0044874	-	2086	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0044875	-	2991	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0044876	-	647	-	MGP_SPRETEiJ_P0044876	104 (aa)	-	-
MGP_SPRETEiJ_T0044877	-	597	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0044869	-	8855	-	MGP_SPRETEiJ_P0044869	2703 (aa)	-	-
MGP_SPRETEiJ_T0044868	-	950	-	MGP_SPRETEiJ_P0044868	171 (aa)	-	UPI0004621176

Gene Model

Click here to download MGP_SPRETEiJ_G0022071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0022071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0022071	Srrm2	70	48.739	MGP_SPRETEiJ_G0028844	Srrm3	67	58.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSG00000167978	SRRM2	100	98.261	Homo_sapiens
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSAMEG00000018018	SRRM2	69	77.183	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0022071	Srrm2	88	58.824	ENSACIG00000023341	-	88	57.143	Amphilophus_citrinellus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSANAG00000034911	SRRM2	67	93.514	Aotus_nancymaae
MGP_SPRETEiJ_G0022071	Srrm2	89	58.065	ENSAMXG00000038994	-	90	51.309	Astyanax_mexicanus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.076	ENSBTAG00000012683	SRRM2	91	71.356	Bos_taurus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSCJAG00000015354	SRRM2	68	77.178	Callithrix_jacchus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSCAFG00000019346	SRRM2	68	76.495	Canis_familiaris
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSCAFG00020025919	SRRM2	68	76.495	Canis_lupus_dingo
MGP_SPRETEiJ_G0022071	Srrm2	100	97.076	ENSCHIG00000011257	SRRM2	68	78.674	Capra_hircus
MGP_SPRETEiJ_G0022071	Srrm2	100	98.246	ENSTSYG00000032523	SRRM2	69	77.923	Carlito_syrichta
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSCCAG00000031601	SRRM2	68	77.449	Cebus_capucinus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSCATG00000038003	SRRM2	68	77.979	Cercocebus_atys
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSCSAG00000010365	SRRM2	68	77.979	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0022071	Srrm2	91	78.344	ENSCPBG00000005984	-	95	76.891	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSCANG00000029659	SRRM2	68	77.979	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.076	ENSCGRG00001012503	Srrm2	68	90.934	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0022071	Srrm2	100	97.076	ENSCGRG00000016285	Srrm2	68	90.826	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0022071	Srrm2	88	59.091	ENSCSEG00000009971	-	92	51.813	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0022071	Srrm2	100	97.076	ENSDNOG00000048469	SRRM2	68	78.435	Dasypus_novemcinctus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.076	ENSETEG00000019959	SRRM2	62	89.954	Echinops_telfairi
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSEASG00005006019	SRRM2	70	71.350	Equus_asinus_asinus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSECAG00000011612	SRRM2	67	73.110	Equus_caballus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSFCAG00000004709	SRRM2	67	77.275	Felis_catus
MGP_SPRETEiJ_G0022071	Srrm2	91	70.186	ENSGALG00000047953	-	68	68.000	Gallus_gallus
MGP_SPRETEiJ_G0022071	Srrm2	72	43.200	ENSGACG00000020232	-	66	37.430	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSGGOG00000015296	SRRM2	68	77.824	Gorilla_gorilla
MGP_SPRETEiJ_G0022071	Srrm2	56	55.208	ENSHGLG00100004269	-	59	68.182	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSSTOG00000025810	SRRM2	67	74.987	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0022071	Srrm2	88	58.710	ENSLBEG00000007729	-	86	57.055	Labrus_bergylta
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSMFAG00000003406	SRRM2	68	78.083	Macaca_fascicularis
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSMMUG00000018858	SRRM2	73	78.187	Macaca_mulatta
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSMNEG00000042677	SRRM2	68	77.979	Macaca_nemestrina
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSMLEG00000041906	SRRM2	68	77.927	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.076	ENSMAUG00000014041	Srrm2	68	85.215	Mesocricetus_auratus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.076	ENSMICG00000046582	SRRM2	68	77.818	Microcebus_murinus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSMOCG00000022507	Srrm2	63	87.434	Microtus_ochrogaster
MGP_SPRETEiJ_G0022071	Srrm2	100	97.076	ENSMODG00000016533	SRRM2	95	79.567	Monodelphis_domestica
MGP_SPRETEiJ_G0022071	Srrm2	100	100.000	MGP_CAROLIEiJ_G0021161	Srrm2	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0022071	Srrm2	100	100.000	ENSMUSG00000039218	Srrm2	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0022071	Srrm2	100	98.830	MGP_PahariEiJ_G0023478	Srrm2	100	98.830	Mus_pahari
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSMPUG00000015264	SRRM2	68	76.195	Mustela_putorius_furo
MGP_SPRETEiJ_G0022071	Srrm2	100	98.246	ENSNGAG00000021633	Srrm2	68	84.537	Nannospalax_galili
MGP_SPRETEiJ_G0022071	Srrm2	57	54.639	ENSNGAG00000005825	-	72	54.639	Nannospalax_galili
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSNLEG00000009466	SRRM2	93	86.475	Nomascus_leucogenys
MGP_SPRETEiJ_G0022071	Srrm2	100	97.076	ENSODEG00000013605	SRRM2	66	74.720	Octodon_degus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.076	ENSOGAG00000032989	SRRM2	69	76.919	Otolemur_garnettii
MGP_SPRETEiJ_G0022071	Srrm2	95	95.679	ENSOARG00000000491	SRRM2	68	75.066	Ovis_aries
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSPPAG00000032551	SRRM2	86	86.667	Pan_paniscus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSPTRG00000042918	-	86	86.667	Pan_troglodytes
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSPTRG00000007662	SRRM2	86	86.667	Pan_troglodytes
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSPANG00000016966	SRRM2	68	78.031	Papio_anubis
MGP_SPRETEiJ_G0022071	Srrm2	88	61.688	ENSPMGG00000000733	-	92	53.886	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSPEMG00000011170	Srrm2	68	91.847	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSPPYG00000007012	SRRM2	68	77.824	Pongo_abelii
MGP_SPRETEiJ_G0022071	Srrm2	100	87.719	ENSPCAG00000009687	-	75	76.241	Procavia_capensis
MGP_SPRETEiJ_G0022071	Srrm2	100	97.076	ENSPCOG00000016593	SRRM2	68	78.340	Propithecus_coquereli
MGP_SPRETEiJ_G0022071	Srrm2	76	49.231	ENSPNYG00000009463	-	88	41.860	Pundamilia_nyererei
MGP_SPRETEiJ_G0022071	Srrm2	89	58.065	ENSPNAG00000018911	-	90	51.546	Pygocentrus_nattereri
MGP_SPRETEiJ_G0022071	Srrm2	100	98.246	ENSRNOG00000058561	Srrm2	99	95.975	Rattus_norvegicus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSRBIG00000033934	SRRM2	67	80.435	Rhinopithecus_bieti
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSRROG00000030979	SRRM2	70	78.290	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSSBOG00000024771	SRRM2	66	96.571	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0022071	Srrm2	100	96.491	ENSSHAG00000017712	SRRM2	95	79.161	Sarcophilus_harrisii
MGP_SPRETEiJ_G0022071	Srrm2	88	58.065	ENSSLDG00000003595	-	79	52.062	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0022071	Srrm2	60	98.765	ENSSARG00000013728	SRRM2	61	98.765	Sorex_araneus
MGP_SPRETEiJ_G0022071	Srrm2	68	73.504	ENSSPUG00000003428	-	100	73.504	Sphenodon_punctatus
MGP_SPRETEiJ_G0022071	Srrm2	71	89.919	ENSTBEG00000006307	-	62	97.980	Tupaia_belangeri
MGP_SPRETEiJ_G0022071	Srrm2	100	97.076	ENSTTRG00000015432	SRRM2	56	97.076	Tursiops_truncatus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSUMAG00000000726	SRRM2	91	74.131	Ursus_maritimus
MGP_SPRETEiJ_G0022071	Srrm2	100	97.661	ENSVVUG00000008770	SRRM2	92	76.507	Vulpes_vulpes
MGP_SPRETEiJ_G0022071	Srrm2	88	59.477	ENSXCOG00000000148	-	92	51.795	Xiphophorus_couchianus